RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
SNX21-211ENST00000486336 ZNF326Q5BKZ1 582 aaKnown RBP16.49■□□□□ 0.23
SNX21-211ENST00000486336 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNX21-211ENST00000486336 MYO5BQ9ULV0 1848 aa16.49■□□□□ 0.23
SNX21-211ENST00000486336 PIP4K2BP78356 416 aa16.48■□□□□ 0.23
SNX21-211ENST00000486336 TMEM131LA2VDJ0 1609 aa16.48■□□□□ 0.23
SNX21-211ENST00000486336 TOM1O60784 492 aa16.47■□□□□ 0.23
SNX21-211ENST00000486336 STRCP1A6NGW2 1772 aa16.45■□□□□ 0.22
SNX21-211ENST00000486336 SPHKAPQ2M3C7 1700 aa16.45■□□□□ 0.22
SNX21-211ENST00000486336 ZFYVE9O95405 1425 aa16.45■□□□□ 0.22
SNX21-211ENST00000486336 PLEKHG1Q9ULL1 1385 aa16.44■□□□□ 0.22
SNX21-211ENST00000486336 KCNA6P17658 529 aa16.44■□□□□ 0.22
SNX21-211ENST00000486336 FOXD1Q16676 465 aa16.44■□□□□ 0.22
SNX21-211ENST00000486336 PROSER2Q86WR7 435 aaPredicted RBP16.43■□□□□ 0.22
SNX21-211ENST00000486336 LRRC7Q96NW7 1537 aa16.43■□□□□ 0.22
SNX21-211ENST00000486336 RBM33Q96EV2 1170 aaKnown RBP16.41■□□□□ 0.22
SNX21-211ENST00000486336 MPHOSPH9Q99550 1183 aa16.41■□□□□ 0.22
SNX21-211ENST00000486336 SETD5Q9C0A6 1442 aa16.41■□□□□ 0.22
SNX21-211ENST00000486336 TBX22Q9Y458 520 aa16.4■□□□□ 0.22
SNX21-211ENST00000486336 CLTCL1P53675 1640 aa16.38■□□□□ 0.21
SNX21-211ENST00000486336 TRPM2O94759 1503 aa16.38■□□□□ 0.21
SNX21-211ENST00000486336 TMEM94Q12767 1356 aa16.37■□□□□ 0.21
SNX21-211ENST00000486336 ACIN1Q9UKV3 1341 aaKnown RBP16.35■□□□□ 0.21
SNX21-211ENST00000486336 KIF1BO60333 1816 aa16.35■□□□□ 0.21
SNX21-211ENST00000486336 HSPA1LP34931 641 aa16.34■□□□□ 0.21
SNX21-211ENST00000486336 C14orf37Q86TY3 774 aa16.34■□□□□ 0.21
SNX21-211ENST00000486336 RAB3GAP2Q9H2M9 1393 aa16.34■□□□□ 0.21
SNX21-211ENST00000486336 ADAMTS13Q76LX8 1427 aa16.34■□□□□ 0.21
SNX21-211ENST00000486336 RGL3Q3MIN7 710 aa16.33■□□□□ 0.2
SNX21-211ENST00000486336 VGFO15240 615 aaPredicted RBP16.32■□□□□ 0.2
SNX21-211ENST00000486336 AMOTL2Q9Y2J4 779 aa16.32■□□□□ 0.2
SNX21-211ENST00000486336 CHD2O14647 1828 aaKnown RBP16.31■□□□□ 0.2
SNX21-211ENST00000486336 NKTRP30414 1462 aaKnown RBP16.3■□□□□ 0.2
SNX21-211ENST00000486336 CCDC144AA2RUR9 1427 aa16.3■□□□□ 0.2
SNX21-211ENST00000486336 RPGRIP1LQ68CZ1 1315 aa16.3■□□□□ 0.2
SNX21-211ENST00000486336 XIRP1Q702N8 1843 aaKnown RBP16.3■□□□□ 0.2
SNX21-211ENST00000486336 MSH6P52701 1360 aa16.29■□□□□ 0.2
SNX21-211ENST00000486336 DIP2AQ14689 1571 aa16.29■□□□□ 0.2
SNX21-211ENST00000486336 NWD1Q149M9 1564 aa16.29■□□□□ 0.2
SNX21-211ENST00000486336 NEXMIFQ5QGS0 1516 aa16.29■□□□□ 0.2
SNX21-211ENST00000486336 PIK3R4Q99570 1358 aa16.28■□□□□ 0.2
SNX21-211ENST00000486336 ALKQ9UM73 1620 aa16.28■□□□□ 0.2
SNX21-211ENST00000486336 PTPRUQ92729 1446 aa16.27■□□□□ 0.19
SNX21-211ENST00000486336 DISP3Q9P2K9 1392 aa16.26■□□□□ 0.19
SNX21-211ENST00000486336 METP08581 1390 aa16.26■□□□□ 0.19
SNX21-211ENST00000486336 SETBP1Q9Y6X0 1596 aa16.25■□□□□ 0.19
SNX21-211ENST00000486336 NRXN3Q9Y4C0 1643 aa16.24■□□□□ 0.19
SNX21-211ENST00000486336 ATF3P18847 181 aa16.23■□□□□ 0.19
SNX21-211ENST00000486336 SLAIN2Q9P270 581 aa16.23■□□□□ 0.19
SNX21-211ENST00000486336 ADGRF5Q8IZF2 1346 aa16.22■□□□□ 0.19
SNX21-211ENST00000486336 HRCP23327 699 aa16.22■□□□□ 0.19
SNX21-211ENST00000486336 C19orf44Q9H6X5 657 aa16.22■□□□□ 0.19
SNX21-211ENST00000486336 NCOA3Q9Y6Q9 1424 aa16.2■□□□□ 0.18
SNX21-211ENST00000486336 CADPS2Q86UW7 1296 aa16.2■□□□□ 0.18
SNX21-211ENST00000486336 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
SNX21-211ENST00000486336 SPATA31E1Q6ZUB1 1445 aa16.19■□□□□ 0.18
SNX21-211ENST00000486336 PPLO60437 1756 aa16.19■□□□□ 0.18
SNX21-211ENST00000486336 ANKRD30BQ9BXX2 1392 aa16.18■□□□□ 0.18
SNX21-211ENST00000486336 STK26Q9P289 416 aa16.17■□□□□ 0.18
SNX21-211ENST00000486336 XRN1Q8IZH2 1706 aaKnown RBP16.16■□□□□ 0.18
SNX21-211ENST00000486336 ROBO1Q9Y6N7 1651 aa16.15■□□□□ 0.18
SNX21-211ENST00000486336 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.15■□□□□ 0.18
SNX21-211ENST00000486336 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
SNX21-211ENST00000486336 TMEM132EQ6IEE7 984 aa16.14■□□□□ 0.17
SNX21-211ENST00000486336 ROBO2Q9HCK4 1378 aa16.13■□□□□ 0.17
SNX21-211ENST00000486336 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
SNX21-211ENST00000486336 DCAF11Q8TEB1 546 aa16.11■□□□□ 0.17
SNX21-211ENST00000486336 SETD1AO15047 1707 aaKnown RBP16.11■□□□□ 0.17
SNX21-211ENST00000486336 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
SNX21-211ENST00000486336 ILDR2Q71H61 639 aa16.1■□□□□ 0.17
SNX21-211ENST00000486336 IFT172Q9UG01 1749 aa16.1■□□□□ 0.17
SNX21-211ENST00000486336 ADGRL3Q9HAR2 1447 aa16.1■□□□□ 0.17
SNX21-211ENST00000486336 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
SNX21-211ENST00000486336 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
SNX21-211ENST00000486336 MED1Q15648 1581 aaPredicted RBP16.09■□□□□ 0.17
SNX21-211ENST00000486336 BRINP3Q76B58 766 aa16.08■□□□□ 0.16
SNX21-211ENST00000486336 PIK3C2GO75747 1445 aa16.08■□□□□ 0.16
SNX21-211ENST00000486336 DCCP43146 1447 aa16.08■□□□□ 0.16
SNX21-211ENST00000486336 PTCH1Q13635 1447 aa16.08■□□□□ 0.16
SNX21-211ENST00000486336 LRPPRCP42704 1394 aaKnown RBP16.07■□□□□ 0.16
SNX21-211ENST00000486336 PHLPP1O60346 1717 aa16.07■□□□□ 0.16
SNX21-211ENST00000486336 MST1RQ04912 1400 aa16.05■□□□□ 0.16
SNX21-211ENST00000486336 DHX57Q6P158 1386 aaKnown RBP16.05■□□□□ 0.16
SNX21-211ENST00000486336 NALCNQ8IZF0 1738 aa16.05■□□□□ 0.16
SNX21-211ENST00000486336 MYOM2P54296 1465 aa16.04■□□□□ 0.16
SNX21-211ENST00000486336 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
SNX21-211ENST00000486336 ABCC11Q96J66 1382 aa16.04■□□□□ 0.16
SNX21-211ENST00000486336 NUTM2FA1L443 756 aa16.03■□□□□ 0.16
SNX21-211ENST00000486336 DDX17Q92841 729 aaKnown RBP16.03■□□□□ 0.16
SNX21-211ENST00000486336 JCADQ9P266 1359 aa16.02■□□□□ 0.16
SNX21-211ENST00000486336 PLEKHH1Q9ULM0 1364 aa16.02■□□□□ 0.16
SNX21-211ENST00000486336 SAFB2Q14151 953 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNX21-211ENST00000486336 ORAI2Q96SN7 254 aa16.02■□□□□ 0.16
SNX21-211ENST00000486336 ASXL1Q8IXJ9 1541 aa16.02■□□□□ 0.15
SNX21-211ENST00000486336 NRXN1Q9ULB1 1477 aa16.02■□□□□ 0.15
SNX21-211ENST00000486336 STAC3Q96MF2 364 aa16.01■□□□□ 0.15
SNX21-211ENST00000486336 POGKQ9P215 609 aa16.01■□□□□ 0.15
SNX21-211ENST00000486336 C1orf167Q5SNV9 1468 aa16.01■□□□□ 0.15
SNX21-211ENST00000486336 PRAG1Q86YV5 1406 aa16.01■□□□□ 0.15
SNX21-211ENST00000486336 TRIM26Q12899 539 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms