RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 NKTRP30414 1462 aaKnown RBP20.61■□□□□ 0.89
DCLK1-207ENST00000486239 DIP2AQ14689 1571 aa20.6■□□□□ 0.89
DCLK1-207ENST00000486239 NWD1Q149M9 1564 aa20.6■□□□□ 0.89
DCLK1-207ENST00000486239 RIMS2Q9UQ26 1411 aa20.6■□□□□ 0.89
DCLK1-207ENST00000486239 PPP1R15AO75807 674 aaPredicted RBP20.58■□□□□ 0.89
DCLK1-207ENST00000486239 KCNA6P17658 529 aa20.56■□□□□ 0.88
DCLK1-207ENST00000486239 TRPM2O94759 1503 aa20.55■□□□□ 0.88
DCLK1-207ENST00000486239 XIRP1Q702N8 1843 aaKnown RBP20.55■□□□□ 0.88
DCLK1-207ENST00000486239 SCAF1Q9H7N4 1312 aaKnown RBP20.54■□□□□ 0.88
DCLK1-207ENST00000486239 ALKQ9UM73 1620 aa20.53■□□□□ 0.88
DCLK1-207ENST00000486239 CHGAP10645 457 aaKnown RBP20.53■□□□□ 0.88
DCLK1-207ENST00000486239 BCANQ96GW7 911 aa20.53■□□□□ 0.88
DCLK1-207ENST00000486239 CHD2O14647 1828 aaKnown RBP20.53■□□□□ 0.88
DCLK1-207ENST00000486239 ACIN1Q9UKV3 1341 aaKnown RBP20.53■□□□□ 0.88
DCLK1-207ENST00000486239 PIK3R4Q99570 1358 aa20.52■□□□□ 0.88
DCLK1-207ENST00000486239 KIF1BO60333 1816 aa20.51■□□□□ 0.87
DCLK1-207ENST00000486239 PIP4K2BP78356 416 aa20.51■□□□□ 0.87
DCLK1-207ENST00000486239 SLC26A8Q96RN1 970 aa20.51■□□□□ 0.87
DCLK1-207ENST00000486239 DISP3Q9P2K9 1392 aa20.49■□□□□ 0.87
DCLK1-207ENST00000486239 TBX22Q9Y458 520 aa20.49■□□□□ 0.87
DCLK1-207ENST00000486239 TMEM94Q12767 1356 aa20.48■□□□□ 0.87
DCLK1-207ENST00000486239 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
DCLK1-207ENST00000486239 CLTCL1P53675 1640 aa20.47■□□□□ 0.87
DCLK1-207ENST00000486239 SETBP1Q9Y6X0 1596 aa20.46■□□□□ 0.87
DCLK1-207ENST00000486239 HSPA1LP34931 641 aa20.45■□□□□ 0.86
DCLK1-207ENST00000486239 PROSER2Q86WR7 435 aaPredicted RBP20.45■□□□□ 0.86
DCLK1-207ENST00000486239 ADAMTS13Q76LX8 1427 aa20.44■□□□□ 0.86
DCLK1-207ENST00000486239 TRIM52Q96A61 297 aa20.44■□□□□ 0.86
DCLK1-207ENST00000486239 MSH6P52701 1360 aa20.44■□□□□ 0.86
DCLK1-207ENST00000486239 FAM135BQ49AJ0 1406 aa20.42■□□□□ 0.86
DCLK1-207ENST00000486239 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
DCLK1-207ENST00000486239 NEXMIFQ5QGS0 1516 aa20.41■□□□□ 0.86
DCLK1-207ENST00000486239 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
DCLK1-207ENST00000486239 NRXN3Q9Y4C0 1643 aa20.39■□□□□ 0.86
DCLK1-207ENST00000486239 MED1Q15648 1581 aaPredicted RBP20.38■□□□□ 0.85
DCLK1-207ENST00000486239 XRN1Q8IZH2 1706 aaKnown RBP20.36■□□□□ 0.85
DCLK1-207ENST00000486239 ROBO1Q9Y6N7 1651 aa20.36■□□□□ 0.85
DCLK1-207ENST00000486239 RPGRIP1LQ68CZ1 1315 aa20.35■□□□□ 0.85
DCLK1-207ENST00000486239 NUTM2DQ5VT03 806 aaPredicted RBP20.34■□□□□ 0.85
DCLK1-207ENST00000486239 DCCP43146 1447 aa20.33■□□□□ 0.84
DCLK1-207ENST00000486239 VGFO15240 615 aaPredicted RBP20.32■□□□□ 0.84
DCLK1-207ENST00000486239 CCDC144AA2RUR9 1427 aa20.32■□□□□ 0.84
DCLK1-207ENST00000486239 PPLO60437 1756 aa20.31■□□□□ 0.84
DCLK1-207ENST00000486239 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.3■□□□□ 0.84
DCLK1-207ENST00000486239 C14orf37Q86TY3 774 aa20.3■□□□□ 0.84
DCLK1-207ENST00000486239 CADPS2Q86UW7 1296 aa20.3■□□□□ 0.84
DCLK1-207ENST00000486239 SETD5Q9C0A6 1442 aa20.29■□□□□ 0.84
DCLK1-207ENST00000486239 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
DCLK1-207ENST00000486239 C19orf44Q9H6X5 657 aa20.29■□□□□ 0.84
DCLK1-207ENST00000486239 AMOTL2Q9Y2J4 779 aa20.29■□□□□ 0.84
DCLK1-207ENST00000486239 SLAIN2Q9P270 581 aa20.28■□□□□ 0.84
DCLK1-207ENST00000486239 PTPRUQ92729 1446 aa20.27■□□□□ 0.84
DCLK1-207ENST00000486239 MPHOSPH9Q99550 1183 aa20.27■□□□□ 0.84
DCLK1-207ENST00000486239 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.83
DCLK1-207ENST00000486239 ATF3P18847 181 aa20.26■□□□□ 0.83
DCLK1-207ENST00000486239 SETD1AO15047 1707 aaKnown RBP20.26■□□□□ 0.83
DCLK1-207ENST00000486239 PHLPP1O60346 1717 aa20.25■□□□□ 0.83
DCLK1-207ENST00000486239 RBM33Q96EV2 1170 aaKnown RBP20.25■□□□□ 0.83
DCLK1-207ENST00000486239 PTCH1Q13635 1447 aa20.25■□□□□ 0.83
DCLK1-207ENST00000486239 IFT172Q9UG01 1749 aa20.24■□□□□ 0.83
DCLK1-207ENST00000486239 METP08581 1390 aa20.23■□□□□ 0.83
DCLK1-207ENST00000486239 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
DCLK1-207ENST00000486239 ANKRD30BQ9BXX2 1392 aa20.22■□□□□ 0.83
DCLK1-207ENST00000486239 ADGRL3Q9HAR2 1447 aa20.21■□□□□ 0.83
DCLK1-207ENST00000486239 AHDC1Q5TGY3 1603 aaPredicted RBP20.21■□□□□ 0.83
DCLK1-207ENST00000486239 SPATA31E1Q6ZUB1 1445 aa20.2■□□□□ 0.82
DCLK1-207ENST00000486239 ILDR2Q71H61 639 aa20.2■□□□□ 0.82
DCLK1-207ENST00000486239 SOCS7O14512 581 aa20.19■□□□□ 0.82
DCLK1-207ENST00000486239 NALCNQ8IZF0 1738 aa20.19■□□□□ 0.82
DCLK1-207ENST00000486239 COL16A1Q07092 1604 aaPredicted RBP20.18■□□□□ 0.82
DCLK1-207ENST00000486239 RAB3GAP2Q9H2M9 1393 aa20.18■□□□□ 0.82
DCLK1-207ENST00000486239 JCADQ9P266 1359 aa20.18■□□□□ 0.82
DCLK1-207ENST00000486239 FOXD1Q16676 465 aa20.16■□□□□ 0.82
DCLK1-207ENST00000486239 LAMC1P11047 1609 aa20.16■□□□□ 0.82
DCLK1-207ENST00000486239 MST1RQ04912 1400 aa20.14■□□□□ 0.81
DCLK1-207ENST00000486239 HRCP23327 699 aa20.14■□□□□ 0.81
DCLK1-207ENST00000486239 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
DCLK1-207ENST00000486239 SHPRHQ149N8 1683 aa20.13■□□□□ 0.81
DCLK1-207ENST00000486239 ASXL1Q8IXJ9 1541 aa20.13■□□□□ 0.81
DCLK1-207ENST00000486239 NHSL1Q5SYE7 1610 aa20.13■□□□□ 0.81
DCLK1-207ENST00000486239 PIK3C2GO75747 1445 aa20.12■□□□□ 0.81
DCLK1-207ENST00000486239 MYOM2P54296 1465 aa20.11■□□□□ 0.81
DCLK1-207ENST00000486239 TECPR2O15040 1411 aa20.1■□□□□ 0.81
DCLK1-207ENST00000486239 SPATA31A6Q5VVP1 1343 aa20.1■□□□□ 0.81
DCLK1-207ENST00000486239 RGL3Q3MIN7 710 aa20.09■□□□□ 0.81
DCLK1-207ENST00000486239 BRINP3Q76B58 766 aa20.09■□□□□ 0.81
DCLK1-207ENST00000486239 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.81
DCLK1-207ENST00000486239 CDC42BPGQ6DT37 1551 aa20.08■□□□□ 0.81
DCLK1-207ENST00000486239 ADGRF5Q8IZF2 1346 aa20.07■□□□□ 0.8
DCLK1-207ENST00000486239 NRXN1Q9ULB1 1477 aa20.07■□□□□ 0.8
DCLK1-207ENST00000486239 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
DCLK1-207ENST00000486239 STAC3Q96MF2 364 aa20.04■□□□□ 0.8
DCLK1-207ENST00000486239 ABCC11Q96J66 1382 aa20.04■□□□□ 0.8
DCLK1-207ENST00000486239 C1orf167Q5SNV9 1468 aa20.04■□□□□ 0.8
DCLK1-207ENST00000486239 YTHDC2Q9H6S0 1430 aaKnown RBP20.01■□□□□ 0.79
DCLK1-207ENST00000486239 LRRC59Q96AG4 307 aaKnown RBP20■□□□□ 0.79
DCLK1-207ENST00000486239 SIRT1Q96EB6 747 aa19.99■□□□□ 0.79
DCLK1-207ENST00000486239 DHX57Q6P158 1386 aaKnown RBP19.98■□□□□ 0.79
DCLK1-207ENST00000486239 C14orf93Q9H972 538 aaKnown RBP19.98■□□□□ 0.79
DCLK1-207ENST00000486239 MEX3CQ5U5Q3 659 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms