RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-211ENST00000485967 PIK3C2BO00750 1634 aa20.29■□□□□ 0.84
SCAP-211ENST00000485967 TOM1O60784 492 aa20.29■□□□□ 0.84
SCAP-211ENST00000485967 HSPA1LP34931 641 aa20.29■□□□□ 0.84
SCAP-211ENST00000485967 MED1Q15648 1581 aaPredicted RBP20.29■□□□□ 0.84
SCAP-211ENST00000485967 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.84
SCAP-211ENST00000485967 PIP4K2BP78356 416 aa20.27■□□□□ 0.84
SCAP-211ENST00000485967 SPHKAPQ2M3C7 1700 aa20.27■□□□□ 0.83
SCAP-211ENST00000485967 KDM5AP29375 1690 aaKnown RBP20.26■□□□□ 0.83
SCAP-211ENST00000485967 TRPM2O94759 1503 aa20.23■□□□□ 0.83
SCAP-211ENST00000485967 ZNF326Q5BKZ1 582 aaKnown RBP20.23■□□□□ 0.83
SCAP-211ENST00000485967 EID1Q9Y6B2 187 aa20.23■□□□□ 0.83
SCAP-211ENST00000485967 CCDC144AA2RUR9 1427 aa20.22■□□□□ 0.83
SCAP-211ENST00000485967 LTKP29376 864 aa20.22■□□□□ 0.83
SCAP-211ENST00000485967 HDGFP51858 240 aaKnown RBP20.22■□□□□ 0.83
SCAP-211ENST00000485967 TMEM2Q9UHN6 1383 aa20.21■□□□□ 0.83
SCAP-211ENST00000485967 XIRP1Q702N8 1843 aaKnown RBP20.2■□□□□ 0.82
SCAP-211ENST00000485967 TXNDC2Q86VQ3 553 aa20.2■□□□□ 0.82
SCAP-211ENST00000485967 ADGRB3O60242 1522 aa20.19■□□□□ 0.82
SCAP-211ENST00000485967 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
SCAP-211ENST00000485967 ANKRD30BQ9BXX2 1392 aa20.18■□□□□ 0.82
SCAP-211ENST00000485967 PPP1R15AO75807 674 aaPredicted RBP20.17■□□□□ 0.82
SCAP-211ENST00000485967 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.16■□□□□ 0.82
SCAP-211ENST00000485967 TMEM131LA2VDJ0 1609 aa20.16■□□□□ 0.82
SCAP-211ENST00000485967 RGL3Q3MIN7 710 aa20.15■□□□□ 0.82
SCAP-211ENST00000485967 BCANQ96GW7 911 aa20.15■□□□□ 0.82
SCAP-211ENST00000485967 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
SCAP-211ENST00000485967 KIF1BO60333 1816 aa20.13■□□□□ 0.81
SCAP-211ENST00000485967 RIMS2Q9UQ26 1411 aa20.13■□□□□ 0.81
SCAP-211ENST00000485967 NUTM2DQ5VT03 806 aaPredicted RBP20.13■□□□□ 0.81
SCAP-211ENST00000485967 NWD1Q149M9 1564 aa20.11■□□□□ 0.81
SCAP-211ENST00000485967 MYO5BQ9ULV0 1848 aa20.11■□□□□ 0.81
SCAP-211ENST00000485967 RPGRIP1LQ68CZ1 1315 aa20.1■□□□□ 0.81
SCAP-211ENST00000485967 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
SCAP-211ENST00000485967 NKTRP30414 1462 aaKnown RBP20.07■□□□□ 0.8
SCAP-211ENST00000485967 VGFO15240 615 aaPredicted RBP20.07■□□□□ 0.8
SCAP-211ENST00000485967 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
SCAP-211ENST00000485967 ZFYVE9O95405 1425 aa20.07■□□□□ 0.8
SCAP-211ENST00000485967 TMEM94Q12767 1356 aa20.06■□□□□ 0.8
SCAP-211ENST00000485967 SPATA31E1Q6ZUB1 1445 aa20.05■□□□□ 0.8
SCAP-211ENST00000485967 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
SCAP-211ENST00000485967 FAM135BQ49AJ0 1406 aa20.02■□□□□ 0.8
SCAP-211ENST00000485967 KCNA6P17658 529 aa20.02■□□□□ 0.8
SCAP-211ENST00000485967 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
SCAP-211ENST00000485967 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
SCAP-211ENST00000485967 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.8
SCAP-211ENST00000485967 PLEKHG1Q9ULL1 1385 aa20.02■□□□□ 0.8
SCAP-211ENST00000485967 KDM2AQ9Y2K7 1162 aa20.01■□□□□ 0.79
SCAP-211ENST00000485967 ROBO1Q9Y6N7 1651 aa20■□□□□ 0.79
SCAP-211ENST00000485967 DCAF11Q8TEB1 546 aa20■□□□□ 0.79
SCAP-211ENST00000485967 NEXMIFQ5QGS0 1516 aa19.99■□□□□ 0.79
SCAP-211ENST00000485967 CHD2O14647 1828 aaKnown RBP19.97■□□□□ 0.79
SCAP-211ENST00000485967 STAC3Q96MF2 364 aa19.96■□□□□ 0.79
SCAP-211ENST00000485967 TBX22Q9Y458 520 aa19.96■□□□□ 0.79
SCAP-211ENST00000485967 ADGRF5Q8IZF2 1346 aa19.96■□□□□ 0.79
SCAP-211ENST00000485967 PPLO60437 1756 aa19.94■□□□□ 0.78
SCAP-211ENST00000485967 PROSER2Q86WR7 435 aaPredicted RBP19.94■□□□□ 0.78
SCAP-211ENST00000485967 RBM33Q96EV2 1170 aaKnown RBP19.93■□□□□ 0.78
SCAP-211ENST00000485967 CLSPNQ9HAW4 1339 aa19.93■□□□□ 0.78
SCAP-211ENST00000485967 DIP2AQ14689 1571 aa19.92■□□□□ 0.78
SCAP-211ENST00000485967 L3MBTL2Q969R5 705 aa19.92■□□□□ 0.78
SCAP-211ENST00000485967 MSH6P52701 1360 aa19.92■□□□□ 0.78
SCAP-211ENST00000485967 ADAMTS13Q76LX8 1427 aa19.91■□□□□ 0.78
SCAP-211ENST00000485967 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
SCAP-211ENST00000485967 RGS17Q9UGC6 210 aaPredicted RBP19.89■□□□□ 0.77
SCAP-211ENST00000485967 SETBP1Q9Y6X0 1596 aa19.87■□□□□ 0.77
SCAP-211ENST00000485967 MYOM2P54296 1465 aa19.87■□□□□ 0.77
SCAP-211ENST00000485967 PHLPP1O60346 1717 aa19.87■□□□□ 0.77
SCAP-211ENST00000485967 IFT172Q9UG01 1749 aa19.87■□□□□ 0.77
SCAP-211ENST00000485967 NCOA3Q9Y6Q9 1424 aa19.85■□□□□ 0.77
SCAP-211ENST00000485967 PIK3R4Q99570 1358 aa19.85■□□□□ 0.77
SCAP-211ENST00000485967 COL16A1Q07092 1604 aaPredicted RBP19.85■□□□□ 0.77
SCAP-211ENST00000485967 CFAP70Q5T0N1 1121 aa19.85■□□□□ 0.77
SCAP-211ENST00000485967 C14orf93Q9H972 538 aaKnown RBP19.85■□□□□ 0.77
SCAP-211ENST00000485967 AMOTL2Q9Y2J4 779 aa19.85■□□□□ 0.77
SCAP-211ENST00000485967 PIK3C2GO75747 1445 aa19.84■□□□□ 0.77
SCAP-211ENST00000485967 METP08581 1390 aa19.83■□□□□ 0.77
SCAP-211ENST00000485967 NRXN3Q9Y4C0 1643 aa19.83■□□□□ 0.76
SCAP-211ENST00000485967 TMEM132EQ6IEE7 984 aa19.82■□□□□ 0.76
SCAP-211ENST00000485967 SLAIN2Q9P270 581 aa19.82■□□□□ 0.76
SCAP-211ENST00000485967 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.82■□□□□ 0.76
SCAP-211ENST00000485967 NRXN1Q9ULB1 1477 aa19.81■□□□□ 0.76
SCAP-211ENST00000485967 XRN1Q8IZH2 1706 aaKnown RBP19.8■□□□□ 0.76
SCAP-211ENST00000485967 STK26Q9P289 416 aa19.8■□□□□ 0.76
SCAP-211ENST00000485967 TIMELESSQ9UNS1 1208 aa19.79■□□□□ 0.76
SCAP-211ENST00000485967 AHDC1Q5TGY3 1603 aaPredicted RBP19.79■□□□□ 0.76
SCAP-211ENST00000485967 JCADQ9P266 1359 aa19.79■□□□□ 0.76
SCAP-211ENST00000485967 PTPRUQ92729 1446 aa19.78■□□□□ 0.76
SCAP-211ENST00000485967 PRAG1Q86YV5 1406 aa19.76■□□□□ 0.75
SCAP-211ENST00000485967 C14orf37Q86TY3 774 aa19.76■□□□□ 0.75
SCAP-211ENST00000485967 POTEAQ6S8J7 498 aa19.75■□□□□ 0.75
SCAP-211ENST00000485967 LRP6O75581 1613 aa19.74■□□□□ 0.75
SCAP-211ENST00000485967 DCCP43146 1447 aa19.74■□□□□ 0.75
SCAP-211ENST00000485967 SHPRHQ149N8 1683 aa19.74■□□□□ 0.75
SCAP-211ENST00000485967 LAMC1P11047 1609 aa19.73■□□□□ 0.75
SCAP-211ENST00000485967 LRPPRCP42704 1394 aaKnown RBP19.73■□□□□ 0.75
SCAP-211ENST00000485967 CADPS2Q86UW7 1296 aa19.73■□□□□ 0.75
SCAP-211ENST00000485967 NBPF1Q3BBV0 1214 aa19.72■□□□□ 0.75
SCAP-211ENST00000485967 NBPF8Q3BBV2 869 aa19.72■□□□□ 0.75
SCAP-211ENST00000485967 YTHDC2Q9H6S0 1430 aaKnown RBP19.72■□□□□ 0.75
SCAP-211ENST00000485967 C19orf44Q9H6X5 657 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms