RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 PPARGC1BQ86YN6 1023 aaKnown RBP31.29■■■□□ 2.6
CHRD-215ENST00000485883 UNC13BO14795 1591 aa31.29■■■□□ 2.6
CHRD-215ENST00000485883 ROCK1Q13464 1354 aa31.28■■■□□ 2.6
CHRD-215ENST00000485883 MYO5BQ9ULV0 1848 aa31.27■■■□□ 2.6
CHRD-215ENST00000485883 FAM135BQ49AJ0 1406 aa31.26■■■□□ 2.6
CHRD-215ENST00000485883 RIMS2Q9UQ26 1411 aa31.26■■■□□ 2.6
CHRD-215ENST00000485883 ITGAEP38570 1179 aa31.26■■■□□ 2.59
CHRD-215ENST00000485883 CHGAP10645 457 aaKnown RBP31.25■■■□□ 2.59
CHRD-215ENST00000485883 GCC2Q8IWJ2 1684 aa31.25■■■□□ 2.59
CHRD-215ENST00000485883 TMEM131LA2VDJ0 1609 aa31.24■■■□□ 2.59
CHRD-215ENST00000485883 PLEKHG1Q9ULL1 1385 aa31.24■■■□□ 2.59
CHRD-215ENST00000485883 NWD1Q149M9 1564 aa31.23■■■□□ 2.59
CHRD-215ENST00000485883 PPP1R15AO75807 674 aaPredicted RBP31.23■■■□□ 2.59
CHRD-215ENST00000485883 NKTRP30414 1462 aaKnown RBP31.21■■■□□ 2.59
CHRD-215ENST00000485883 NUTM2DQ5VT03 806 aaPredicted RBP31.21■■■□□ 2.59
CHRD-215ENST00000485883 E9PCH4 1651 aa31.21■■■□□ 2.59
CHRD-215ENST00000485883 HDGFP51858 240 aaKnown RBP31.19■■■□□ 2.58
CHRD-215ENST00000485883 NUP155O75694 1391 aa31.17■■■□□ 2.58
CHRD-215ENST00000485883 IQGAP3Q86VI3 1631 aa31.16■■■□□ 2.58
CHRD-215ENST00000485883 RGS17Q9UGC6 210 aaPredicted RBP31.16■■■□□ 2.58
CHRD-215ENST00000485883 ROBO1Q9Y6N7 1651 aa31.14■■■□□ 2.58
CHRD-215ENST00000485883 TBX22Q9Y458 520 aa31.14■■■□□ 2.58
CHRD-215ENST00000485883 MSH6P52701 1360 aa31.14■■■□□ 2.58
CHRD-215ENST00000485883 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.13■■■□□ 2.57
CHRD-215ENST00000485883 CHD2O14647 1828 aaKnown RBP31.12■■■□□ 2.57
CHRD-215ENST00000485883 ADAMTS13Q76LX8 1427 aa31.11■■■□□ 2.57
CHRD-215ENST00000485883 SLAIN2Q9P270 581 aa31.09■■■□□ 2.57
CHRD-215ENST00000485883 C14orf37Q86TY3 774 aa31■■■□□ 2.55
CHRD-215ENST00000485883 NCOA3Q9Y6Q9 1424 aa30.98■■■□□ 2.55
CHRD-215ENST00000485883 DIP2AQ14689 1571 aa30.98■■■□□ 2.55
CHRD-215ENST00000485883 PIK3R4Q99570 1358 aa30.98■■■□□ 2.55
CHRD-215ENST00000485883 PTPRUQ92729 1446 aa30.98■■■□□ 2.55
CHRD-215ENST00000485883 POTEAQ6S8J7 498 aa30.96■■■□□ 2.55
CHRD-215ENST00000485883 AMOTL2Q9Y2J4 779 aa30.96■■■□□ 2.55
CHRD-215ENST00000485883 PHLPP1O60346 1717 aa30.94■■■□□ 2.54
CHRD-215ENST00000485883 C19orf44Q9H6X5 657 aa30.93■■■□□ 2.54
CHRD-215ENST00000485883 SPHKAPQ2M3C7 1700 aa30.92■■■□□ 2.54
CHRD-215ENST00000485883 TRPM2O94759 1503 aa30.92■■■□□ 2.54
CHRD-215ENST00000485883 RRBP1Q9P2E9 1410 aaKnown RBP30.91■■■□□ 2.54
CHRD-215ENST00000485883 ZNF326Q5BKZ1 582 aaKnown RBP30.91■■■□□ 2.54
CHRD-215ENST00000485883 JCADQ9P266 1359 aa30.91■■■□□ 2.54
CHRD-215ENST00000485883 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.9■■■□□ 2.54
CHRD-215ENST00000485883 CADPS2Q86UW7 1296 aa30.9■■■□□ 2.54
CHRD-215ENST00000485883 ATF3P18847 181 aa30.89■■■□□ 2.54
CHRD-215ENST00000485883 NRXN3Q9Y4C0 1643 aa30.88■■■□□ 2.53
CHRD-215ENST00000485883 NAIPQ13075 1403 aa30.87■■■□□ 2.53
CHRD-215ENST00000485883 COL16A1Q07092 1604 aaPredicted RBP30.87■■■□□ 2.53
CHRD-215ENST00000485883 SETBP1Q9Y6X0 1596 aa30.85■■■□□ 2.53
CHRD-215ENST00000485883 METP08581 1390 aa30.84■■■□□ 2.53
CHRD-215ENST00000485883 CLTCL1P53675 1640 aa30.84■■■□□ 2.53
CHRD-215ENST00000485883 BRINP3Q76B58 766 aa30.8■■■□□ 2.52
CHRD-215ENST00000485883 XRN1Q8IZH2 1706 aaKnown RBP30.8■■■□□ 2.52
CHRD-215ENST00000485883 NEXMIFQ5QGS0 1516 aa30.78■■■□□ 2.52
CHRD-215ENST00000485883 AHDC1Q5TGY3 1603 aaPredicted RBP30.77■■■□□ 2.52
CHRD-215ENST00000485883 LRP6O75581 1613 aa30.76■■■□□ 2.52
CHRD-215ENST00000485883 TRIM52Q96A61 297 aa30.75■■■□□ 2.51
CHRD-215ENST00000485883 SPATA31A6Q5VVP1 1343 aa30.73■■■□□ 2.51
CHRD-215ENST00000485883 DCCP43146 1447 aa30.73■■■□□ 2.51
CHRD-215ENST00000485883 MST1RQ04912 1400 aa30.71■■■□□ 2.51
CHRD-215ENST00000485883 HFM1A2PYH4 1435 aa30.7■■■□□ 2.5
CHRD-215ENST00000485883 MEX3CQ5U5Q3 659 aaKnown RBP30.68■■■□□ 2.5
CHRD-215ENST00000485883 ASXL1Q8IXJ9 1541 aa30.68■■■□□ 2.5
CHRD-215ENST00000485883 KIF1BO60333 1816 aa30.67■■■□□ 2.5
CHRD-215ENST00000485883 SLC4A1APQ9BWU0 796 aaKnown RBP30.66■■■□□ 2.5
CHRD-215ENST00000485883 ADGRL3Q9HAR2 1447 aa30.65■■■□□ 2.5
CHRD-215ENST00000485883 SHPRHQ149N8 1683 aa30.65■■■□□ 2.5
CHRD-215ENST00000485883 DDX17Q92841 729 aaKnown RBP30.64■■■□□ 2.5
CHRD-215ENST00000485883 NUTM2BA6NNL0 878 aaPredicted RBP30.63■■■□□ 2.49
CHRD-215ENST00000485883 NUTM2EB1AL46 878 aaPredicted RBP30.63■■■□□ 2.49
CHRD-215ENST00000485883 NUTM2AQ8IVF1 878 aaPredicted RBP30.63■■■□□ 2.49
CHRD-215ENST00000485883 VGFO15240 615 aaPredicted RBP30.62■■■□□ 2.49
CHRD-215ENST00000485883 SETD1AO15047 1707 aaKnown RBP30.61■■■□□ 2.49
CHRD-215ENST00000485883 FOXD1Q16676 465 aa30.61■■■□□ 2.49
CHRD-215ENST00000485883 NALCNQ8IZF0 1738 aa30.59■■■□□ 2.49
CHRD-215ENST00000485883 SETD5Q9C0A6 1442 aa30.59■■■□□ 2.49
CHRD-215ENST00000485883 ZNF772Q68DY9 489 aaPredicted RBP30.59■■■□□ 2.49
CHRD-215ENST00000485883 ROBO2Q9HCK4 1378 aa30.58■■■□□ 2.49
CHRD-215ENST00000485883 NHSL1Q5SYE7 1610 aa30.57■■■□□ 2.48
CHRD-215ENST00000485883 RPGRIP1LQ68CZ1 1315 aa30.55■■■□□ 2.48
CHRD-215ENST00000485883 LRRC59Q96AG4 307 aaKnown RBP30.54■■■□□ 2.48
CHRD-215ENST00000485883 PTCH1Q13635 1447 aa30.54■■■□□ 2.48
CHRD-215ENST00000485883 C1orf167Q5SNV9 1468 aa30.53■■■□□ 2.48
CHRD-215ENST00000485883 ORAI2Q96SN7 254 aa30.49■■■□□ 2.47
CHRD-215ENST00000485883 PNPLA6Q8IY17 1366 aa30.49■■■□□ 2.47
CHRD-215ENST00000485883 PPLO60437 1756 aa30.49■■■□□ 2.47
CHRD-215ENST00000485883 AFF2P51816 1311 aa30.48■■■□□ 2.47
CHRD-215ENST00000485883 PRAG1Q86YV5 1406 aa30.46■■■□□ 2.47
CHRD-215ENST00000485883 ADGRF5Q8IZF2 1346 aa30.46■■■□□ 2.47
CHRD-215ENST00000485883 RXRBP28702 533 aa30.45■■■□□ 2.47
CHRD-215ENST00000485883 RGL3Q3MIN7 710 aa30.45■■■□□ 2.47
CHRD-215ENST00000485883 C8orf37Q96NL8 207 aa30.43■■■□□ 2.46
CHRD-215ENST00000485883 MPHOSPH9Q99550 1183 aa30.43■■■□□ 2.46
CHRD-215ENST00000485883 CCDC144AA2RUR9 1427 aa30.41■■■□□ 2.46
CHRD-215ENST00000485883 SOS2Q07890 1332 aaPredicted RBP30.4■■■□□ 2.46
CHRD-215ENST00000485883 SPATA31E1Q6ZUB1 1445 aa30.39■■■□□ 2.46
CHRD-215ENST00000485883 UPF1Q92900 1129 aaKnown RBP eCLIP30.39■■■□□ 2.46
CHRD-215ENST00000485883 ADAMTS2O95450 1211 aa30.38■■■□□ 2.45
CHRD-215ENST00000485883 LAMC1P11047 1609 aa30.36■■■□□ 2.45
CHRD-215ENST00000485883 STK26Q9P289 416 aa30.36■■■□□ 2.45
CHRD-215ENST00000485883 WAPLQ7Z5K2 1190 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms