RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 HRCP23327 699 aa18.67■□□□□ 0.58
SDHB-207ENST00000485515 TRPM2O94759 1503 aa18.67■□□□□ 0.58
SDHB-207ENST00000485515 ILDR1Q86SU0 546 aaPredicted RBP18.66■□□□□ 0.58
SDHB-207ENST00000485515 LTBP4Q8N2S1 1624 aa18.66■□□□□ 0.58
SDHB-207ENST00000485515 FOXD1Q16676 465 aa18.64■□□□□ 0.57
SDHB-207ENST00000485515 ZFYVE9O95405 1425 aa18.64■□□□□ 0.57
SDHB-207ENST00000485515 CPS1P31327 1500 aa18.64■□□□□ 0.57
SDHB-207ENST00000485515 MYO5BQ9ULV0 1848 aa18.63■□□□□ 0.57
SDHB-207ENST00000485515 PLEKHG1Q9ULL1 1385 aa18.63■□□□□ 0.57
SDHB-207ENST00000485515 IQSEC2Q5JU85 1478 aa18.63■□□□□ 0.57
SDHB-207ENST00000485515 NUTM2DQ5VT03 806 aaPredicted RBP18.62■□□□□ 0.57
SDHB-207ENST00000485515 SLC26A8Q96RN1 970 aa18.62■□□□□ 0.57
SDHB-207ENST00000485515 CCDC144AA2RUR9 1427 aa18.62■□□□□ 0.57
SDHB-207ENST00000485515 CLTCL1P53675 1640 aa18.61■□□□□ 0.57
SDHB-207ENST00000485515 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
SDHB-207ENST00000485515 KIF1BO60333 1816 aa18.6■□□□□ 0.57
SDHB-207ENST00000485515 RPGRIP1LQ68CZ1 1315 aa18.58■□□□□ 0.57
SDHB-207ENST00000485515 VGFO15240 615 aaPredicted RBP18.57■□□□□ 0.56
SDHB-207ENST00000485515 KCNA6P17658 529 aa18.57■□□□□ 0.56
SDHB-207ENST00000485515 TBX22Q9Y458 520 aa18.57■□□□□ 0.56
SDHB-207ENST00000485515 UBAP1LF5GYI3 381 aa18.54■□□□□ 0.56
SDHB-207ENST00000485515 TOM1O60784 492 aa18.54■□□□□ 0.56
SDHB-207ENST00000485515 RGL3Q3MIN7 710 aa18.53■□□□□ 0.56
SDHB-207ENST00000485515 TRIM26Q12899 539 aaPredicted RBP18.52■□□□□ 0.56
SDHB-207ENST00000485515 PROSER2Q86WR7 435 aaPredicted RBP18.51■□□□□ 0.55
SDHB-207ENST00000485515 PIK3R4Q99570 1358 aa18.51■□□□□ 0.55
SDHB-207ENST00000485515 DIP2AQ14689 1571 aa18.51■□□□□ 0.55
SDHB-207ENST00000485515 LRRC7Q96NW7 1537 aa18.49■□□□□ 0.55
SDHB-207ENST00000485515 NEXMIFQ5QGS0 1516 aa18.49■□□□□ 0.55
SDHB-207ENST00000485515 ADAMTS13Q76LX8 1427 aa18.48■□□□□ 0.55
SDHB-207ENST00000485515 ANKRD30BQ9BXX2 1392 aa18.47■□□□□ 0.55
SDHB-207ENST00000485515 STRCP1A6NGW2 1772 aa18.47■□□□□ 0.55
SDHB-207ENST00000485515 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
SDHB-207ENST00000485515 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
SDHB-207ENST00000485515 SETBP1Q9Y6X0 1596 aa18.46■□□□□ 0.55
SDHB-207ENST00000485515 SPATA31E1Q6ZUB1 1445 aa18.45■□□□□ 0.54
SDHB-207ENST00000485515 TMEM94Q12767 1356 aa18.44■□□□□ 0.54
SDHB-207ENST00000485515 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
SDHB-207ENST00000485515 AMOTL2Q9Y2J4 779 aa18.44■□□□□ 0.54
SDHB-207ENST00000485515 NWD1Q149M9 1564 aa18.43■□□□□ 0.54
SDHB-207ENST00000485515 PIP4K2BP78356 416 aa18.43■□□□□ 0.54
SDHB-207ENST00000485515 CHD2O14647 1828 aaKnown RBP18.42■□□□□ 0.54
SDHB-207ENST00000485515 PPLO60437 1756 aa18.41■□□□□ 0.54
SDHB-207ENST00000485515 MSH6P52701 1360 aa18.41■□□□□ 0.54
SDHB-207ENST00000485515 RBM33Q96EV2 1170 aaKnown RBP18.39■□□□□ 0.53
SDHB-207ENST00000485515 METP08581 1390 aa18.39■□□□□ 0.53
SDHB-207ENST00000485515 NCOA3Q9Y6Q9 1424 aa18.39■□□□□ 0.53
SDHB-207ENST00000485515 NRXN3Q9Y4C0 1643 aa18.38■□□□□ 0.53
SDHB-207ENST00000485515 STAC3Q96MF2 364 aa18.38■□□□□ 0.53
SDHB-207ENST00000485515 ADGRF5Q8IZF2 1346 aa18.38■□□□□ 0.53
SDHB-207ENST00000485515 ALKQ9UM73 1620 aa18.36■□□□□ 0.53
SDHB-207ENST00000485515 PTPRUQ92729 1446 aa18.35■□□□□ 0.53
SDHB-207ENST00000485515 C19orf44Q9H6X5 657 aa18.35■□□□□ 0.53
SDHB-207ENST00000485515 ATF3P18847 181 aa18.34■□□□□ 0.53
SDHB-207ENST00000485515 DCAF11Q8TEB1 546 aa18.34■□□□□ 0.53
SDHB-207ENST00000485515 KDM2AQ9Y2K7 1162 aa18.33■□□□□ 0.52
SDHB-207ENST00000485515 IFT172Q9UG01 1749 aa18.32■□□□□ 0.52
SDHB-207ENST00000485515 CADPS2Q86UW7 1296 aa18.32■□□□□ 0.52
SDHB-207ENST00000485515 XIRP1Q702N8 1843 aaKnown RBP18.32■□□□□ 0.52
SDHB-207ENST00000485515 MYOM2P54296 1465 aa18.32■□□□□ 0.52
SDHB-207ENST00000485515 PIK3C2GO75747 1445 aa18.32■□□□□ 0.52
SDHB-207ENST00000485515 XRN1Q8IZH2 1706 aaKnown RBP18.3■□□□□ 0.52
SDHB-207ENST00000485515 SLAIN2Q9P270 581 aa18.3■□□□□ 0.52
SDHB-207ENST00000485515 C14orf93Q9H972 538 aaKnown RBP18.29■□□□□ 0.52
SDHB-207ENST00000485515 STK26Q9P289 416 aa18.28■□□□□ 0.52
SDHB-207ENST00000485515 PTCH1Q13635 1447 aa18.27■□□□□ 0.52
SDHB-207ENST00000485515 TMEM132EQ6IEE7 984 aa18.27■□□□□ 0.52
SDHB-207ENST00000485515 DHX57Q6P158 1386 aaKnown RBP18.27■□□□□ 0.51
SDHB-207ENST00000485515 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
SDHB-207ENST00000485515 SETD1AO15047 1707 aaKnown RBP18.26■□□□□ 0.51
SDHB-207ENST00000485515 FAM135BQ49AJ0 1406 aa18.26■□□□□ 0.51
SDHB-207ENST00000485515 HSPA1LP34931 641 aa18.26■□□□□ 0.51
SDHB-207ENST00000485515 CFAP70Q5T0N1 1121 aa18.26■□□□□ 0.51
SDHB-207ENST00000485515 LAMC1P11047 1609 aa18.25■□□□□ 0.51
SDHB-207ENST00000485515 LRPPRCP42704 1394 aaKnown RBP18.25■□□□□ 0.51
SDHB-207ENST00000485515 DCCP43146 1447 aa18.24■□□□□ 0.51
SDHB-207ENST00000485515 NEUROD1Q13562 356 aa18.24■□□□□ 0.51
SDHB-207ENST00000485515 ROBO2Q9HCK4 1378 aa18.24■□□□□ 0.51
SDHB-207ENST00000485515 PRAG1Q86YV5 1406 aa18.23■□□□□ 0.51
SDHB-207ENST00000485515 ABCC11Q96J66 1382 aa18.23■□□□□ 0.51
SDHB-207ENST00000485515 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.23■□□□□ 0.51
SDHB-207ENST00000485515 YTHDC2Q9H6S0 1430 aaKnown RBP18.23■□□□□ 0.51
SDHB-207ENST00000485515 ADGRL3Q9HAR2 1447 aa18.23■□□□□ 0.51
SDHB-207ENST00000485515 SIRT1Q96EB6 747 aa18.2■□□□□ 0.5
SDHB-207ENST00000485515 SIN3AQ96ST3 1273 aa18.2■□□□□ 0.5
SDHB-207ENST00000485515 PCGF6Q9BYE7 350 aa18.2■□□□□ 0.5
SDHB-207ENST00000485515 TECPR2O15040 1411 aa18.2■□□□□ 0.5
SDHB-207ENST00000485515 POGKQ9P215 609 aa18.18■□□□□ 0.5
SDHB-207ENST00000485515 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
SDHB-207ENST00000485515 WAPLQ7Z5K2 1190 aa18.17■□□□□ 0.5
SDHB-207ENST00000485515 L3MBTL2Q969R5 705 aa18.16■□□□□ 0.5
SDHB-207ENST00000485515 ASXL1Q8IXJ9 1541 aa18.15■□□□□ 0.5
SDHB-207ENST00000485515 TRAK1Q9UPV9 953 aa18.15■□□□□ 0.5
SDHB-207ENST00000485515 KNDC1Q76NI1 1749 aa18.15■□□□□ 0.5
SDHB-207ENST00000485515 PRAM1Q96QH2 718 aa18.14■□□□□ 0.49
SDHB-207ENST00000485515 NALCNQ8IZF0 1738 aa18.14■□□□□ 0.49
SDHB-207ENST00000485515 BRINP3Q76B58 766 aa18.13■□□□□ 0.49
SDHB-207ENST00000485515 MST1RQ04912 1400 aa18.13■□□□□ 0.49
SDHB-207ENST00000485515 TONSLQ96HA7 1378 aa18.12■□□□□ 0.49
SDHB-207ENST00000485515 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms