RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 GPRASP1Q5JY77 1395 aa19.69■□□□□ 0.74
PCDH17-202ENST00000484979 NAP1L5Q96NT1 182 aaPredicted RBP19.69■□□□□ 0.74
PCDH17-202ENST00000484979 SLC52A1Q9NWF4 448 aa19.69■□□□□ 0.74
PCDH17-202ENST00000484979 ZBED9Q6R2W3 1325 aa19.69■□□□□ 0.74
PCDH17-202ENST00000484979 TPM4P67936 248 aa19.68■□□□□ 0.74
PCDH17-202ENST00000484979 NOL10Q9BSC4 688 aaKnown RBP19.68■□□□□ 0.74
PCDH17-202ENST00000484979 MARCH6O60337 910 aa19.68■□□□□ 0.74
PCDH17-202ENST00000484979 RUFY2Q8WXA3 655 aa19.68■□□□□ 0.74
PCDH17-202ENST00000484979 LRRC9Q6ZRR7 1453 aa19.68■□□□□ 0.74
PCDH17-202ENST00000484979 IFT140Q96RY7 1462 aa19.68■□□□□ 0.74
PCDH17-202ENST00000484979 COG6Q9Y2V7 657 aa19.68■□□□□ 0.74
PCDH17-202ENST00000484979 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
PCDH17-202ENST00000484979 CFAP70Q5T0N1 1121 aa19.67■□□□□ 0.74
PCDH17-202ENST00000484979 ARHGAP5Q13017 1502 aa19.67■□□□□ 0.74
PCDH17-202ENST00000484979 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
PCDH17-202ENST00000484979 DIAPH3Q9NSV4 1193 aa19.67■□□□□ 0.74
PCDH17-202ENST00000484979 SF3A1Q15459 793 aaKnown RBP19.66■□□□□ 0.74
PCDH17-202ENST00000484979 TSPYL4Q9UJ04 414 aa19.66■□□□□ 0.74
PCDH17-202ENST00000484979 AMOTL1Q8IY63 956 aa19.65■□□□□ 0.74
PCDH17-202ENST00000484979 CABP2Q9NPB3 220 aa19.65■□□□□ 0.74
PCDH17-202ENST00000484979 NOL8Q76FK4 1167 aaKnown RBP19.65■□□□□ 0.74
PCDH17-202ENST00000484979 AKAP17AQ02040 695 aaKnown RBP19.65■□□□□ 0.74
PCDH17-202ENST00000484979 DZIP1LQ8IYY4 767 aaKnown RBP19.65■□□□□ 0.74
PCDH17-202ENST00000484979 SYNE3Q6ZMZ3 975 aa19.64■□□□□ 0.73
PCDH17-202ENST00000484979 RRBP1Q9P2E9 1410 aaKnown RBP19.64■□□□□ 0.73
PCDH17-202ENST00000484979 ROCK1Q13464 1354 aa19.64■□□□□ 0.73
PCDH17-202ENST00000484979 G3BP1Q13283 466 aaKnown RBP eCLIP19.63■□□□□ 0.73
PCDH17-202ENST00000484979 HSP90AB4PQ58FF6 505 aa19.63■□□□□ 0.73
PCDH17-202ENST00000484979 IFIT2P09913 472 aaKnown RBP19.63■□□□□ 0.73
PCDH17-202ENST00000484979 NECTIN2Q92692 538 aa19.63■□□□□ 0.73
PCDH17-202ENST00000484979 VPS37DQ86XT2 251 aa19.63■□□□□ 0.73
PCDH17-202ENST00000484979 ABTB2Q8N961 1025 aa19.63■□□□□ 0.73
PCDH17-202ENST00000484979 HFM1A2PYH4 1435 aa19.62■□□□□ 0.73
PCDH17-202ENST00000484979 HMOX1P09601 288 aa19.62■□□□□ 0.73
PCDH17-202ENST00000484979 RRP1P56182 461 aaKnown RBP19.62■□□□□ 0.73
PCDH17-202ENST00000484979 PLEKHH2Q8IVE3 1493 aa19.62■□□□□ 0.73
PCDH17-202ENST00000484979 ZKSCAN1P17029 563 aaPredicted RBP19.62■□□□□ 0.73
PCDH17-202ENST00000484979 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
PCDH17-202ENST00000484979 PRDM2Q13029 1718 aa19.62■□□□□ 0.73
PCDH17-202ENST00000484979 REC8O95072 547 aa19.61■□□□□ 0.73
PCDH17-202ENST00000484979 NUTM2GQ5VZR2 741 aa19.61■□□□□ 0.73
PCDH17-202ENST00000484979 KIF7Q2M1P5 1343 aa19.61■□□□□ 0.73
PCDH17-202ENST00000484979 PLIN1O60240 522 aa19.61■□□□□ 0.73
PCDH17-202ENST00000484979 ESCO1Q5FWF5 840 aa19.61■□□□□ 0.73
PCDH17-202ENST00000484979 FAM184AQ8NB25 1140 aa19.61■□□□□ 0.73
PCDH17-202ENST00000484979 SCAPERQ9BY12 1400 aa19.6■□□□□ 0.73
PCDH17-202ENST00000484979 ATP6V1DQ9Y5K8 247 aa19.6■□□□□ 0.73
PCDH17-202ENST00000484979 GZF1Q9H116 711 aaPredicted RBP19.6■□□□□ 0.73
PCDH17-202ENST00000484979 CCDC7Q96M83 1385 aa19.6■□□□□ 0.73
PCDH17-202ENST00000484979 NESP48681 1621 aa19.59■□□□□ 0.73
PCDH17-202ENST00000484979 MTHFSP49914 203 aa19.59■□□□□ 0.73
PCDH17-202ENST00000484979 VPS53Q5VIR6 699 aa19.59■□□□□ 0.73
PCDH17-202ENST00000484979 TRIM34Q9BYJ4 488 aa19.58■□□□□ 0.72
PCDH17-202ENST00000484979 GAS2L2Q8NHY3 880 aa19.58■□□□□ 0.72
PCDH17-202ENST00000484979 KIF21BO75037 1637 aa19.58■□□□□ 0.72
PCDH17-202ENST00000484979 H3BQV1 296 aa19.57■□□□□ 0.72
PCDH17-202ENST00000484979 IFFO2Q5TF58 517 aa19.57■□□□□ 0.72
PCDH17-202ENST00000484979 RIC3Q7Z5B4 369 aa19.57■□□□□ 0.72
PCDH17-202ENST00000484979 FAM161AQ3B820 660 aa19.57■□□□□ 0.72
PCDH17-202ENST00000484979 TROQ12816 1431 aaPredicted RBP19.57■□□□□ 0.72
PCDH17-202ENST00000484979 ANKLE2Q86XL3 938 aa19.57■□□□□ 0.72
PCDH17-202ENST00000484979 ZNF692Q9BU19 519 aaPredicted RBP19.56■□□□□ 0.72
PCDH17-202ENST00000484979 TRDNQ13061 729 aa19.56■□□□□ 0.72
PCDH17-202ENST00000484979 IPO9Q96P70 1041 aaKnown RBP19.56■□□□□ 0.72
PCDH17-202ENST00000484979 PRAM1Q96QH2 718 aa19.56■□□□□ 0.72
PCDH17-202ENST00000484979 APPP05067 770 aa19.56■□□□□ 0.72
PCDH17-202ENST00000484979 EXOC6Q8TAG9 804 aa19.56■□□□□ 0.72
PCDH17-202ENST00000484979 CRBNQ96SW2 442 aa19.56■□□□□ 0.72
PCDH17-202ENST00000484979 RAPGEF3O95398 923 aa19.55■□□□□ 0.72
PCDH17-202ENST00000484979 PLEKHO1Q53GL0 409 aaPredicted RBP19.55■□□□□ 0.72
PCDH17-202ENST00000484979 RNF20Q5VTR2 975 aa19.54■□□□□ 0.72
PCDH17-202ENST00000484979 PHF14O94880 888 aa19.54■□□□□ 0.72
PCDH17-202ENST00000484979 AAMPQ13685 434 aa19.54■□□□□ 0.72
PCDH17-202ENST00000484979 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
PCDH17-202ENST00000484979 POGZQ7Z3K3 1410 aa19.54■□□□□ 0.72
PCDH17-202ENST00000484979 TOPBP1Q92547 1522 aa19.54■□□□□ 0.72
PCDH17-202ENST00000484979 WASHC2AQ641Q2 1341 aa19.53■□□□□ 0.72
PCDH17-202ENST00000484979 RBM33Q96EV2 1170 aaKnown RBP19.53■□□□□ 0.72
PCDH17-202ENST00000484979 USP35Q9P2H5 1018 aa19.53■□□□□ 0.72
PCDH17-202ENST00000484979 FOXD4L1Q9NU39 408 aa19.53■□□□□ 0.72
PCDH17-202ENST00000484979 CPLX1O14810 134 aa19.51■□□□□ 0.71
PCDH17-202ENST00000484979 ERC2O15083 957 aa19.51■□□□□ 0.71
PCDH17-202ENST00000484979 CTDP1Q9Y5B0 961 aaPredicted RBP19.51■□□□□ 0.71
PCDH17-202ENST00000484979 C9orf84Q5VXU9 1444 aa19.51■□□□□ 0.71
PCDH17-202ENST00000484979 AIMP1Q12904 312 aaKnown RBP19.51■□□□□ 0.71
PCDH17-202ENST00000484979 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
PCDH17-202ENST00000484979 TCP11L2Q8N4U5 519 aa19.5■□□□□ 0.71
PCDH17-202ENST00000484979 UBTFL1P0CB47 393 aaPredicted RBP19.49■□□□□ 0.71
PCDH17-202ENST00000484979 TRIM29Q14134 588 aa19.49■□□□□ 0.71
PCDH17-202ENST00000484979 RPGRIP1LQ68CZ1 1315 aa19.48■□□□□ 0.71
PCDH17-202ENST00000484979 TATP17735 454 aaPredicted RBP19.48■□□□□ 0.71
PCDH17-202ENST00000484979 PDE4AP27815 886 aa19.48■□□□□ 0.71
PCDH17-202ENST00000484979 CREBRFQ8IUR6 639 aa19.48■□□□□ 0.71
PCDH17-202ENST00000484979 SLC26A8Q96RN1 970 aa19.48■□□□□ 0.71
PCDH17-202ENST00000484979 RTN4Q9NQC3 1192 aaKnown RBP19.48■□□□□ 0.71
PCDH17-202ENST00000484979 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
PCDH17-202ENST00000484979 GNAI3P08754 354 aa19.48■□□□□ 0.71
PCDH17-202ENST00000484979 EFCAB5A4FU69 1503 aa19.48■□□□□ 0.71
PCDH17-202ENST00000484979 CEP89Q96ST8 783 aa19.47■□□□□ 0.71
PCDH17-202ENST00000484979 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms