RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 CCDC146Q8IYE0 955 aa25.64■■□□□ 1.69
RPUSD3-216ENST00000484134 EIF2AK4Q9P2K8 1649 aaKnown RBP25.64■■□□□ 1.69
RPUSD3-216ENST00000484134 CDC42BPBQ9Y5S2 1711 aa25.63■■□□□ 1.69
RPUSD3-216ENST00000484134 UNC13BO14795 1591 aa25.63■■□□□ 1.69
RPUSD3-216ENST00000484134 IGHDP01880 384 aa25.62■■□□□ 1.69
RPUSD3-216ENST00000484134 NUP160Q12769 1436 aa25.62■■□□□ 1.69
RPUSD3-216ENST00000484134 EIF3AQ14152 1382 aaKnown RBP25.59■■□□□ 1.69
RPUSD3-216ENST00000484134 RSPH4AQ5TD94 716 aa25.59■■□□□ 1.69
RPUSD3-216ENST00000484134 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
RPUSD3-216ENST00000484134 ERCC6Q03468 1493 aa25.59■■□□□ 1.69
RPUSD3-216ENST00000484134 SEC24BO95487 1268 aa25.58■■□□□ 1.69
RPUSD3-216ENST00000484134 RNF17Q9BXT8 1623 aaKnown RBP25.58■■□□□ 1.69
RPUSD3-216ENST00000484134 APAF1O14727 1248 aa25.58■■□□□ 1.69
RPUSD3-216ENST00000484134 DMRT2Q9Y5R5 561 aa25.57■■□□□ 1.68
RPUSD3-216ENST00000484134 SYCP2Q9BX26 1530 aa25.56■■□□□ 1.68
RPUSD3-216ENST00000484134 PREX2Q70Z35 1606 aa25.56■■□□□ 1.68
RPUSD3-216ENST00000484134 IQGAP3Q86VI3 1631 aa25.56■■□□□ 1.68
RPUSD3-216ENST00000484134 NKTRP30414 1462 aaKnown RBP25.55■■□□□ 1.68
RPUSD3-216ENST00000484134 PIK3C2GO75747 1445 aa25.54■■□□□ 1.68
RPUSD3-216ENST00000484134 ATP10AO60312 1499 aa25.53■■□□□ 1.68
RPUSD3-216ENST00000484134 POGKQ9P215 609 aa25.53■■□□□ 1.68
RPUSD3-216ENST00000484134 ASXL1Q8IXJ9 1541 aa25.52■■□□□ 1.68
RPUSD3-216ENST00000484134 VIRMAQ69YN4 1812 aaKnown RBP25.51■■□□□ 1.67
RPUSD3-216ENST00000484134 FAM43AQ8N2R8 423 aa25.49■■□□□ 1.67
RPUSD3-216ENST00000484134 MAST1Q9Y2H9 1570 aa25.49■■□□□ 1.67
RPUSD3-216ENST00000484134 EIF5BO60841 1220 aaKnown RBP25.49■■□□□ 1.67
RPUSD3-216ENST00000484134 SYNMO15061 1565 aa25.48■■□□□ 1.67
RPUSD3-216ENST00000484134 IQGAP1P46940 1657 aa25.48■■□□□ 1.67
RPUSD3-216ENST00000484134 E9PSI1 815 aa25.47■■□□□ 1.67
RPUSD3-216ENST00000484134 ABCC2Q92887 1545 aa25.46■■□□□ 1.67
RPUSD3-216ENST00000484134 PANK1Q8TE04 598 aa25.46■■□□□ 1.67
RPUSD3-216ENST00000484134 MADDQ8WXG6 1647 aa25.45■■□□□ 1.67
RPUSD3-216ENST00000484134 SLKQ9H2G2 1235 aaPredicted RBP25.44■■□□□ 1.66
RPUSD3-216ENST00000484134 COG6Q9Y2V7 657 aa25.44■■□□□ 1.66
RPUSD3-216ENST00000484134 NLRP1Q9C000 1473 aa25.44■■□□□ 1.66
RPUSD3-216ENST00000484134 CLUAP1Q96AJ1 413 aa25.44■■□□□ 1.66
RPUSD3-216ENST00000484134 MYOM1P52179 1685 aa25.43■■□□□ 1.66
RPUSD3-216ENST00000484134 PDE3AQ14432 1141 aa25.43■■□□□ 1.66
RPUSD3-216ENST00000484134 CDCA8Q53HL2 280 aa25.43■■□□□ 1.66
RPUSD3-216ENST00000484134 ARHGAP5Q13017 1502 aa25.43■■□□□ 1.66
RPUSD3-216ENST00000484134 NPC1L1Q9UHC9 1359 aa25.43■■□□□ 1.66
RPUSD3-216ENST00000484134 CGNL1Q0VF96 1302 aa25.43■■□□□ 1.66
RPUSD3-216ENST00000484134 PLXNC1O60486 1568 aa25.42■■□□□ 1.66
RPUSD3-216ENST00000484134 TTC37Q6PGP7 1564 aa25.41■■□□□ 1.66
RPUSD3-216ENST00000484134 MAPK8IP3Q9UPT6 1336 aa25.41■■□□□ 1.66
RPUSD3-216ENST00000484134 SCAF11Q99590 1463 aaKnown RBP25.4■■□□□ 1.66
RPUSD3-216ENST00000484134 ANTXR1Q9H6X2 564 aa25.4■■□□□ 1.66
RPUSD3-216ENST00000484134 UBE2Q2Q8WVN8 375 aa25.4■■□□□ 1.66
RPUSD3-216ENST00000484134 BECN1Q14457 450 aa25.38■■□□□ 1.65
RPUSD3-216ENST00000484134 DUOX2Q9NRD8 1548 aa25.38■■□□□ 1.65
RPUSD3-216ENST00000484134 CENPJQ9HC77 1338 aaPredicted RBP25.38■■□□□ 1.65
RPUSD3-216ENST00000484134 RSPH6AQ9H0K4 717 aa25.37■■□□□ 1.65
RPUSD3-216ENST00000484134 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.36■■□□□ 1.65
RPUSD3-216ENST00000484134 WWC1Q8IX03 1113 aa25.36■■□□□ 1.65
RPUSD3-216ENST00000484134 CARD14Q9BXL6 1004 aa25.36■■□□□ 1.65
RPUSD3-216ENST00000484134 CANXP27824 592 aaKnown RBP25.34■■□□□ 1.65
RPUSD3-216ENST00000484134 RRAGDQ9NQL2 400 aaPredicted RBP25.34■■□□□ 1.65
RPUSD3-216ENST00000484134 SCAPERQ9BY12 1400 aa25.34■■□□□ 1.65
RPUSD3-216ENST00000484134 TNNQ9UQP3 1299 aa25.33■■□□□ 1.65
RPUSD3-216ENST00000484134 PCDHB15Q9Y5E8 787 aa25.33■■□□□ 1.65
RPUSD3-216ENST00000484134 SPHKAPQ2M3C7 1700 aa25.31■■□□□ 1.64
RPUSD3-216ENST00000484134 RLBP1P12271 317 aa25.3■■□□□ 1.64
RPUSD3-216ENST00000484134 TBC1D32Q96NH3 1257 aa25.3■■□□□ 1.64
RPUSD3-216ENST00000484134 TBC1D2Q9BYX2 928 aa25.3■■□□□ 1.64
RPUSD3-216ENST00000484134 NINLQ9Y2I6 1382 aa25.3■■□□□ 1.64
RPUSD3-216ENST00000484134 NGEFQ8N5V2 710 aa25.29■■□□□ 1.64
RPUSD3-216ENST00000484134 RARSP54136 660 aaKnown RBP25.28■■□□□ 1.64
RPUSD3-216ENST00000484134 KDM5AP29375 1690 aaKnown RBP25.27■■□□□ 1.64
RPUSD3-216ENST00000484134 PDZRN3Q9UPQ7 1066 aa25.27■■□□□ 1.64
RPUSD3-216ENST00000484134 NEUROD2Q15784 382 aa25.26■■□□□ 1.63
RPUSD3-216ENST00000484134 RRP7AQ9Y3A4 280 aaKnown RBP25.26■■□□□ 1.63
RPUSD3-216ENST00000484134 CEP152O94986 1710 aa25.26■■□□□ 1.63
RPUSD3-216ENST00000484134 L1TD1Q5T7N2 865 aaKnown RBP25.25■■□□□ 1.63
RPUSD3-216ENST00000484134 ERVK-7P63135 1459 aa25.24■■□□□ 1.63
RPUSD3-216ENST00000484134 PMFBP1Q8TBY8 1022 aa25.24■■□□□ 1.63
RPUSD3-216ENST00000484134 TRPM2O94759 1503 aa25.24■■□□□ 1.63
RPUSD3-216ENST00000484134 CLTCL1P53675 1640 aa25.23■■□□□ 1.63
RPUSD3-216ENST00000484134 SPRYD3Q8NCJ5 442 aa25.23■■□□□ 1.63
RPUSD3-216ENST00000484134 BCL2L13Q9BXK5 485 aa25.23■■□□□ 1.63
RPUSD3-216ENST00000484134 ARXQ96QS3 562 aa25.22■■□□□ 1.63
RPUSD3-216ENST00000484134 POLR3AO14802 1390 aaPredicted RBP25.22■■□□□ 1.63
RPUSD3-216ENST00000484134 XRCC6P12956 609 aaKnown RBP eCLIP25.22■■□□□ 1.63
RPUSD3-216ENST00000484134 CFAP70Q5T0N1 1121 aa25.22■■□□□ 1.63
RPUSD3-216ENST00000484134 PTPRTO14522 1441 aa25.21■■□□□ 1.63
RPUSD3-216ENST00000484134 STAC3Q96MF2 364 aa25.21■■□□□ 1.63
RPUSD3-216ENST00000484134 UPF2Q9HAU5 1272 aaKnown RBP25.21■■□□□ 1.63
RPUSD3-216ENST00000484134 TRAPPC8Q9Y2L5 1435 aa25.19■■□□□ 1.62
RPUSD3-216ENST00000484134 FSD2A1L4K1 749 aa25.18■■□□□ 1.62
RPUSD3-216ENST00000484134 TCP11L2Q8N4U5 519 aa25.18■■□□□ 1.62
RPUSD3-216ENST00000484134 PHF23Q9BUL5 403 aaPredicted RBP25.17■■□□□ 1.62
RPUSD3-216ENST00000484134 MCM4P33991 863 aa25.17■■□□□ 1.62
RPUSD3-216ENST00000484134 ZMYM3Q14202 1370 aa25.16■■□□□ 1.62
RPUSD3-216ENST00000484134 TNNT2P45379 298 aaPredicted RBP25.16■■□□□ 1.62
RPUSD3-216ENST00000484134 PANK2Q9BZ23 570 aa25.16■■□□□ 1.62
RPUSD3-216ENST00000484134 SHPRHQ149N8 1683 aa25.16■■□□□ 1.62
RPUSD3-216ENST00000484134 AAMPQ13685 434 aa25.15■■□□□ 1.62
RPUSD3-216ENST00000484134 GZF1Q9H116 711 aaPredicted RBP25.15■■□□□ 1.62
RPUSD3-216ENST00000484134 RUNDC1Q96C34 613 aa25.15■■□□□ 1.62
RPUSD3-216ENST00000484134 RWDD1Q9H446 243 aaPredicted RBP25.14■■□□□ 1.61
RPUSD3-216ENST00000484134 GOLGA6L3A6NEY3 463 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms