RNA–Protein interactions for RNA: ENST00000484023.1

ATP13A3-207, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 522 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-207ENST00000484023 AMHR2Q16671 573 aa12.28□□□□□ -0.44
ATP13A3-207ENST00000484023 SOWAHBA6NEL2 793 aa12.27□□□□□ -0.45
ATP13A3-207ENST00000484023 PDE4DQ08499 809 aa12.27□□□□□ -0.45
ATP13A3-207ENST00000484023 RNF166Q96A37 237 aaPredicted RBP12.27□□□□□ -0.45
ATP13A3-207ENST00000484023 LRCH3Q96II8 777 aa12.27□□□□□ -0.45
ATP13A3-207ENST00000484023 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.27□□□□□ -0.45
ATP13A3-207ENST00000484023 THSD4Q6ZMP0 1018 aa12.26□□□□□ -0.45
ATP13A3-207ENST00000484023 TMUB1Q9BVT8 246 aa12.26□□□□□ -0.45
ATP13A3-207ENST00000484023 DAXXQ9UER7 740 aaPredicted RBP12.26□□□□□ -0.45
ATP13A3-207ENST00000484023 RNF40O75150 1001 aa12.25□□□□□ -0.45
ATP13A3-207ENST00000484023 HDGFP51858 240 aaKnown RBP12.25□□□□□ -0.45
ATP13A3-207ENST00000484023 TTLL12Q14166 644 aaPredicted RBP12.24□□□□□ -0.45
ATP13A3-207ENST00000484023 PARP9Q8IXQ6 854 aa12.24□□□□□ -0.45
ATP13A3-207ENST00000484023 GPCPD1Q9NPB8 672 aa12.23□□□□□ -0.45
ATP13A3-207ENST00000484023 CLCN1P35523 988 aa12.22□□□□□ -0.45
ATP13A3-207ENST00000484023 HPS5Q9UPZ3 1129 aa12.22□□□□□ -0.45
ATP13A3-207ENST00000484023 DDX11L8A8MPP1 907 aa12.21□□□□□ -0.45
ATP13A3-207ENST00000484023 PTPN5P54829 565 aa12.21□□□□□ -0.45
ATP13A3-207ENST00000484023 GPBP1L1Q9HC44 474 aaPredicted RBP12.21□□□□□ -0.45
ATP13A3-207ENST00000484023 SLC10A3P09131 477 aa12.2□□□□□ -0.46
ATP13A3-207ENST00000484023 GIGYF2Q6Y7W6 1299 aaKnown RBP12.2□□□□□ -0.46
ATP13A3-207ENST00000484023 SLF2Q8IX21 1173 aa12.2□□□□□ -0.46
ATP13A3-207ENST00000484023 FAM217BQ9NTX9 383 aaPredicted RBP12.19□□□□□ -0.46
ATP13A3-207ENST00000484023 WBP1LQ9NX94 342 aa12.19□□□□□ -0.46
ATP13A3-207ENST00000484023 TSR3Q9UJK0 312 aaKnown RBP12.18□□□□□ -0.46
ATP13A3-207ENST00000484023 PPP4CP60510 307 aa12.17□□□□□ -0.46
ATP13A3-207ENST00000484023 MS4A1P11836 297 aa12.16□□□□□ -0.46
ATP13A3-207ENST00000484023 SSTR3P32745 418 aaPredicted RBP12.16□□□□□ -0.46
ATP13A3-207ENST00000484023 BRPF1P55201 1214 aaPredicted RBP12.16□□□□□ -0.46
ATP13A3-207ENST00000484023 RDH13Q8NBN7 331 aa12.16□□□□□ -0.46
ATP13A3-207ENST00000484023 NEUROD2Q15784 382 aa12.15□□□□□ -0.46
ATP13A3-207ENST00000484023 SLC4A3P48751 1232 aa12.14□□□□□ -0.47
ATP13A3-207ENST00000484023 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
ATP13A3-207ENST00000484023 CD46P15529 392 aa12.13□□□□□ -0.47
ATP13A3-207ENST00000484023 KDM4CQ9H3R0 1056 aa12.13□□□□□ -0.47
ATP13A3-207ENST00000484023 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
ATP13A3-207ENST00000484023 CFHP08603 1231 aa12.12□□□□□ -0.47
ATP13A3-207ENST00000484023 APLP1P51693 650 aa12.11□□□□□ -0.47
ATP13A3-207ENST00000484023 HCSTQ9UBK5 93 aa12.1□□□□□ -0.47
ATP13A3-207ENST00000484023 GCGRP47871 477 aa12.08□□□□□ -0.48
ATP13A3-207ENST00000484023 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
ATP13A3-207ENST00000484023 BEGAINQ9BUH8 593 aa12.07□□□□□ -0.48
ATP13A3-207ENST00000484023 FAM117AQ9C073 453 aa12.06□□□□□ -0.48
ATP13A3-207ENST00000484023 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
ATP13A3-207ENST00000484023 KMT5BQ4FZB7 885 aa12.04□□□□□ -0.48
ATP13A3-207ENST00000484023 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.49
ATP13A3-207ENST00000484023 FUT2Q10981 343 aa12.02□□□□□ -0.49
ATP13A3-207ENST00000484023 NYAP1Q6ZVC0 841 aa12.02□□□□□ -0.49
ATP13A3-207ENST00000484023 PUS10Q3MIT2 529 aaKnown RBP12.01□□□□□ -0.49
ATP13A3-207ENST00000484023 KDM4AO75164 1064 aa12□□□□□ -0.49
ATP13A3-207ENST00000484023 SPIRE2Q8WWL2 714 aa12□□□□□ -0.49
ATP13A3-207ENST00000484023 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
ATP13A3-207ENST00000484023 HLA-CQ95604 372 aa11.99□□□□□ -0.49
ATP13A3-207ENST00000484023 PRR14Q9BWN1 585 aa11.99□□□□□ -0.49
ATP13A3-207ENST00000484023 PCDHB3Q9Y5E6 796 aa11.99□□□□□ -0.49
ATP13A3-207ENST00000484023 COPS2P61201 443 aa11.98□□□□□ -0.49
ATP13A3-207ENST00000484023 NUTM1Q86Y26 1132 aa11.98□□□□□ -0.49
ATP13A3-207ENST00000484023 IL27Q8NEV9 243 aa11.98□□□□□ -0.49
ATP13A3-207ENST00000484023 TBC1D2Q9BYX2 928 aa11.98□□□□□ -0.49
ATP13A3-207ENST00000484023 BLOC1S3Q6QNY0 202 aa11.97□□□□□ -0.49
ATP13A3-207ENST00000484023 ATP6V1AP38606 617 aa11.96□□□□□ -0.49
ATP13A3-207ENST00000484023 GUCA2AQ02747 115 aa11.96□□□□□ -0.49
ATP13A3-207ENST00000484023 MTRQ99707 1265 aa11.96□□□□□ -0.49
ATP13A3-207ENST00000484023 HOXA2O43364 376 aa11.95□□□□□ -0.5
ATP13A3-207ENST00000484023 DDRGK1Q96HY6 314 aa11.95□□□□□ -0.5
ATP13A3-207ENST00000484023 NDUFV2P19404 249 aa11.94□□□□□ -0.5
ATP13A3-207ENST00000484023 TJAP1Q5JTD0 557 aa11.94□□□□□ -0.5
ATP13A3-207ENST00000484023 MORN1Q5T089 497 aa11.94□□□□□ -0.5
ATP13A3-207ENST00000484023 MOXD2PA6NHM9 499 aa11.93□□□□□ -0.5
ATP13A3-207ENST00000484023 ZNF516Q92618 1163 aa11.93□□□□□ -0.5
ATP13A3-207ENST00000484023 USP46P62068 366 aa11.92□□□□□ -0.5
ATP13A3-207ENST00000484023 MYSM1Q5VVJ2 828 aa11.92□□□□□ -0.5
ATP13A3-207ENST00000484023 SLC27A5Q9Y2P5 690 aa11.92□□□□□ -0.5
ATP13A3-207ENST00000484023 SCUBE3Q8IX30 993 aa11.9□□□□□ -0.5
ATP13A3-207ENST00000484023 GRIPAP1Q4V328 841 aa11.89□□□□□ -0.51
ATP13A3-207ENST00000484023 IL21Q9HBE4 155 aa11.89□□□□□ -0.51
ATP13A3-207ENST00000484023 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
ATP13A3-207ENST00000484023 POLR3EQ9NVU0 708 aa11.88□□□□□ -0.51
ATP13A3-207ENST00000484023 PCDHGC3Q9UN70 934 aa11.88□□□□□ -0.51
ATP13A3-207ENST00000484023 TLL1O43897 1013 aa11.87□□□□□ -0.51
ATP13A3-207ENST00000484023 ZPR1O75312 459 aa11.87□□□□□ -0.51
ATP13A3-207ENST00000484023 NR1I2O75469 434 aa11.87□□□□□ -0.51
ATP13A3-207ENST00000484023 DIXDC1Q155Q3 683 aa11.87□□□□□ -0.51
ATP13A3-207ENST00000484023 RSBN1LQ6PCB5 846 aaPredicted RBP11.87□□□□□ -0.51
ATP13A3-207ENST00000484023 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
ATP13A3-207ENST00000484023 LIMD1Q9UGP4 676 aa11.87□□□□□ -0.51
ATP13A3-207ENST00000484023 FDX1P10109 184 aa11.86□□□□□ -0.51
ATP13A3-207ENST00000484023 NKX2-3Q8TAU0 364 aa11.86□□□□□ -0.51
ATP13A3-207ENST00000484023 KCNC4Q03721 635 aa11.85□□□□□ -0.51
ATP13A3-207ENST00000484023 RNF19BQ6ZMZ0 732 aa11.85□□□□□ -0.51
ATP13A3-207ENST00000484023 SYMPKQ92797 1274 aaKnown RBP11.85□□□□□ -0.51
ATP13A3-207ENST00000484023 RSPH6AQ9H0K4 717 aa11.85□□□□□ -0.51
ATP13A3-207ENST00000484023 PCDHB15Q9Y5E8 787 aa11.85□□□□□ -0.51
ATP13A3-207ENST00000484023 SPTLC1O15269 473 aa11.84□□□□□ -0.51
ATP13A3-207ENST00000484023 CSPP1Q1MSJ5 1256 aa11.84□□□□□ -0.51
ATP13A3-207ENST00000484023 SH3D19Q5HYK7 790 aa11.84□□□□□ -0.51
ATP13A3-207ENST00000484023 PROCA1Q8NCQ7 364 aaPredicted RBP11.84□□□□□ -0.51
ATP13A3-207ENST00000484023 THAP11Q96EK4 314 aa11.83□□□□□ -0.52
ATP13A3-207ENST00000484023 PLA2G2EQ9NZK7 142 aa11.83□□□□□ -0.52
ATP13A3-207ENST00000484023 CLK2P49760 499 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms