RNA–Protein interactions for RNA: ENST00000484023.1

ATP13A3-207, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 522 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-207ENST00000484023 AEBP2Q6ZN18 517 aaPredicted RBP29.21■■■□□ 2.27
ATP13A3-207ENST00000484023 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
ATP13A3-207ENST00000484023 PHF23Q9BUL5 403 aaPredicted RBP25.13■■□□□ 1.61
ATP13A3-207ENST00000484023 SENP3Q9H4L4 574 aaPredicted RBP24.66■■□□□ 1.54
ATP13A3-207ENST00000484023 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
ATP13A3-207ENST00000484023 FOXD1Q16676 465 aa22.96■■□□□ 1.27
ATP13A3-207ENST00000484023 PPP6R1Q9UPN7 881 aa22.18■■□□□ 1.14
ATP13A3-207ENST00000484023 ADRA2BP18089 450 aa22.15■■□□□ 1.14
ATP13A3-207ENST00000484023 PIAS4Q8N2W9 510 aaPredicted RBP21.64■■□□□ 1.05
ATP13A3-207ENST00000484023 MSH5O43196 834 aa21.06■□□□□ 0.96
ATP13A3-207ENST00000484023 PPP4R3CPQ6ZMV5 832 aa20.42■□□□□ 0.86
ATP13A3-207ENST00000484023 MAPK8IP2Q13387 824 aaPredicted RBP20.11■□□□□ 0.81
ATP13A3-207ENST00000484023 SCAF1Q9H7N4 1312 aaKnown RBP20.1■□□□□ 0.81
ATP13A3-207ENST00000484023 KCNA4P22459 653 aa20.03■□□□□ 0.8
ATP13A3-207ENST00000484023 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
ATP13A3-207ENST00000484023 CNKSR2Q8WXI2 1034 aa19.8■□□□□ 0.76
ATP13A3-207ENST00000484023 DMRT2Q9Y5R5 561 aa19.72■□□□□ 0.75
ATP13A3-207ENST00000484023 NPM3O75607 178 aaKnown RBP19.62■□□□□ 0.73
ATP13A3-207ENST00000484023 RNF216Q9NWF9 866 aaPredicted RBP19.39■□□□□ 0.69
ATP13A3-207ENST00000484023 HOXD11P31277 338 aaPredicted RBP19.32■□□□□ 0.68
ATP13A3-207ENST00000484023 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
ATP13A3-207ENST00000484023 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
ATP13A3-207ENST00000484023 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
ATP13A3-207ENST00000484023 DCAF8L1A6NGE4 600 aa18.9■□□□□ 0.62
ATP13A3-207ENST00000484023 EHMT2Q96KQ7 1210 aa18.6■□□□□ 0.57
ATP13A3-207ENST00000484023 SLC4A2P04920 1241 aa18.53■□□□□ 0.56
ATP13A3-207ENST00000484023 ZBTB22O15209 634 aa18.46■□□□□ 0.55
ATP13A3-207ENST00000484023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.546e-6■□□□□ 8.2
ATP13A3-207ENST00000484023 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
ATP13A3-207ENST00000484023 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
ATP13A3-207ENST00000484023 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
ATP13A3-207ENST00000484023 RNF39Q9H2S5 420 aa18.1■□□□□ 0.49
ATP13A3-207ENST00000484023 MYCNP04198 464 aaPredicted RBP18.07■□□□□ 0.48
ATP13A3-207ENST00000484023 C1QBPQ07021 282 aaKnown RBP17.84■□□□□ 0.45
ATP13A3-207ENST00000484023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
ATP13A3-207ENST00000484023 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
ATP13A3-207ENST00000484023 SAMD1Q6SPF0 538 aaPredicted RBP17.79■□□□□ 0.44
ATP13A3-207ENST00000484023 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
ATP13A3-207ENST00000484023 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
ATP13A3-207ENST00000484023 ATXN8OSP0DMR3 200 aa17.65■□□□□ 0.42
ATP13A3-207ENST00000484023 CACNB1Q02641 598 aaPredicted RBP17.6■□□□□ 0.41
ATP13A3-207ENST00000484023 APLP2Q06481 763 aa17.59■□□□□ 0.41
ATP13A3-207ENST00000484023 CAPN15O75808 1086 aa17.55■□□□□ 0.4
ATP13A3-207ENST00000484023 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
ATP13A3-207ENST00000484023 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
ATP13A3-207ENST00000484023 ABCB7O75027 752 aa17.28■□□□□ 0.36
ATP13A3-207ENST00000484023 DSG3P32926 999 aa17.26■□□□□ 0.35
ATP13A3-207ENST00000484023 POLA2Q14181 598 aa17.22■□□□□ 0.35
ATP13A3-207ENST00000484023 MKRN4PQ13434 485 aaPredicted RBP16.9■□□□□ 0.3
ATP13A3-207ENST00000484023 FBLN2P98095 1184 aa16.82■□□□□ 0.28
ATP13A3-207ENST00000484023 ZBTB12Q9Y330 459 aaPredicted RBP16.82■□□□□ 0.28
ATP13A3-207ENST00000484023 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
ATP13A3-207ENST00000484023 FKBP8Q14318 412 aa16.57■□□□□ 0.24
ATP13A3-207ENST00000484023 SPDYE4A6NLX3 237 aa16.49■□□□□ 0.23
ATP13A3-207ENST00000484023 SPDYE2BA6NHP3 402 aa16.42■□□□□ 0.22
ATP13A3-207ENST00000484023 SPDYE6P0CI01 402 aa16.42■□□□□ 0.22
ATP13A3-207ENST00000484023 SPDYE2Q495Y8 402 aa16.42■□□□□ 0.22
ATP13A3-207ENST00000484023 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
ATP13A3-207ENST00000484023 RBM42Q9BTD8 480 aaKnown RBP16.35■□□□□ 0.21
ATP13A3-207ENST00000484023 SSUH2Q9Y2M2 353 aa16.33■□□□□ 0.2
ATP13A3-207ENST00000484023 PROM2Q8N271 834 aa16.21■□□□□ 0.19
ATP13A3-207ENST00000484023 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
ATP13A3-207ENST00000484023 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
ATP13A3-207ENST00000484023 REM2Q8IYK8 340 aaPredicted RBP16.09■□□□□ 0.17
ATP13A3-207ENST00000484023 SPDYE1Q8NFV5 336 aaPredicted RBP15.93■□□□□ 0.14
ATP13A3-207ENST00000484023 PITPNM1O00562 1244 aa15.92■□□□□ 0.14
ATP13A3-207ENST00000484023 CLEC11AQ9Y240 323 aa15.92■□□□□ 0.14
ATP13A3-207ENST00000484023 FBXO3Q9UK99 471 aa15.87■□□□□ 0.13
ATP13A3-207ENST00000484023 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
ATP13A3-207ENST00000484023 PRR29P0C7W0 189 aa15.75■□□□□ 0.11
ATP13A3-207ENST00000484023 VASPP50552 380 aaPredicted RBP15.72■□□□□ 0.11
ATP13A3-207ENST00000484023 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
ATP13A3-207ENST00000484023 MIER1Q8N108 512 aa15.63■□□□□ 0.09
ATP13A3-207ENST00000484023 PLCD3Q8N3E9 789 aa15.6■□□□□ 0.09
ATP13A3-207ENST00000484023 CREBZFQ9NS37 354 aa15.6■□□□□ 0.09
ATP13A3-207ENST00000484023 FXR2P51116 673 aaKnown RBP eCLIP15.59■□□□□ 0.09
ATP13A3-207ENST00000484023 CHADLQ6NUI6 762 aa15.57■□□□□ 0.08
ATP13A3-207ENST00000484023 PIP4P2Q8N4L2 257 aa15.57■□□□□ 0.08
ATP13A3-207ENST00000484023 IFNLR1Q8IU57 520 aaPredicted RBP15.56■□□□□ 0.08
ATP13A3-207ENST00000484023 PRKAR2AP13861 404 aaKnown RBP15.51■□□□□ 0.07
ATP13A3-207ENST00000484023 PLEKHG5O94827 1062 aa15.46■□□□□ 0.07
ATP13A3-207ENST00000484023 MNX1P50219 401 aaPredicted RBP15.44■□□□□ 0.06
ATP13A3-207ENST00000484023 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
ATP13A3-207ENST00000484023 FARP1Q9Y4F1 1045 aaPredicted RBP15.36■□□□□ 0.05
ATP13A3-207ENST00000484023 ZBTB47Q9UFB7 747 aaPredicted RBP15.34■□□□□ 0.05
ATP13A3-207ENST00000484023 SPOCK2Q92563 424 aa15.31■□□□□ 0.04
ATP13A3-207ENST00000484023 NPM1P06748 294 aaKnown RBP eCLIP15.25■□□□□ 0.03
ATP13A3-207ENST00000484023 NUBP1P53384 320 aa15.25■□□□□ 0.03
ATP13A3-207ENST00000484023 POTEHQ6S545 545 aa15.2■□□□□ 0.02
ATP13A3-207ENST00000484023 RASEFQ8IZ41 740 aa15.19■□□□□ 0.02
ATP13A3-207ENST00000484023 RTN4Q9NQC3 1192 aaKnown RBP15.15■□□□□ 0.02
ATP13A3-207ENST00000484023 AMER1Q5JTC6 1135 aaPredicted RBP15.1■□□□□ 0.01
ATP13A3-207ENST00000484023 TSPYL2Q9H2G4 693 aaPredicted RBP15.1■□□□□ 0.01
ATP13A3-207ENST00000484023 DCAF8Q5TAQ9 597 aa15.09■□□□□ 0.01
ATP13A3-207ENST00000484023 CIZ1Q9ULV3 898 aaPredicted RBP15.09■□□□□ 0.01
ATP13A3-207ENST00000484023 FAM212AQ96EL1 285 aa15.07■□□□□ 0
ATP13A3-207ENST00000484023 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
ATP13A3-207ENST00000484023 C19orf67A6NJJ6 358 aa15.05■□□□□ -0
ATP13A3-207ENST00000484023 PKD2Q13563 968 aa15.05■□□□□ -0
ATP13A3-207ENST00000484023 HAX1O00165 279 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms