RNA–Protein interactions for RNA: ENST00000483683.1

COL4A2-208, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-208ENST00000483683 LRRC7Q96NW7 1537 aa22.21■■□□□ 1.15
COL4A2-208ENST00000483683 SLC4A1APQ9BWU0 796 aaKnown RBP22.2■■□□□ 1.14
COL4A2-208ENST00000483683 PLEKHG1Q9ULL1 1385 aa22.2■■□□□ 1.14
COL4A2-208ENST00000483683 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.19■■□□□ 1.14
COL4A2-208ENST00000483683 TRPM2O94759 1503 aa22.17■■□□□ 1.14
COL4A2-208ENST00000483683 PPP1R15AO75807 674 aaPredicted RBP22.16■■□□□ 1.14
COL4A2-208ENST00000483683 KCNA6P17658 529 aa22.16■■□□□ 1.14
COL4A2-208ENST00000483683 NUTM2DQ5VT03 806 aaPredicted RBP22.15■■□□□ 1.14
COL4A2-208ENST00000483683 SETD5Q9C0A6 1442 aa22.14■■□□□ 1.13
COL4A2-208ENST00000483683 CLTCL1P53675 1640 aa22.13■■□□□ 1.13
COL4A2-208ENST00000483683 BCANQ96GW7 911 aa22.13■■□□□ 1.13
COL4A2-208ENST00000483683 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
COL4A2-208ENST00000483683 TBX22Q9Y458 520 aa22.13■■□□□ 1.13
COL4A2-208ENST00000483683 TOM1O60784 492 aa22.12■■□□□ 1.13
COL4A2-208ENST00000483683 ADAMTS13Q76LX8 1427 aa22.12■■□□□ 1.13
COL4A2-208ENST00000483683 ALKQ9UM73 1620 aa22.11■■□□□ 1.13
COL4A2-208ENST00000483683 MPHOSPH9Q99550 1183 aa22.11■■□□□ 1.13
COL4A2-208ENST00000483683 FOXD1Q16676 465 aa22.09■■□□□ 1.13
COL4A2-208ENST00000483683 ZNF326Q5BKZ1 582 aaKnown RBP22.08■■□□□ 1.13
COL4A2-208ENST00000483683 XIRP1Q702N8 1843 aaKnown RBP22.08■■□□□ 1.12
COL4A2-208ENST00000483683 NWD1Q149M9 1564 aa22.08■■□□□ 1.12
COL4A2-208ENST00000483683 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
COL4A2-208ENST00000483683 TMEM94Q12767 1356 aa22.06■■□□□ 1.12
COL4A2-208ENST00000483683 NKTRP30414 1462 aaKnown RBP22.05■■□□□ 1.12
COL4A2-208ENST00000483683 RAB3GAP2Q9H2M9 1393 aa22.05■■□□□ 1.12
COL4A2-208ENST00000483683 PROSER2Q86WR7 435 aaPredicted RBP22.05■■□□□ 1.12
COL4A2-208ENST00000483683 CHD2O14647 1828 aaKnown RBP22.05■■□□□ 1.12
COL4A2-208ENST00000483683 KIF1BO60333 1816 aa22.04■■□□□ 1.12
COL4A2-208ENST00000483683 PIP4K2BP78356 416 aa22.04■■□□□ 1.12
COL4A2-208ENST00000483683 NEXMIFQ5QGS0 1516 aa22.04■■□□□ 1.12
COL4A2-208ENST00000483683 PIK3R4Q99570 1358 aa22.03■■□□□ 1.12
COL4A2-208ENST00000483683 DIP2AQ14689 1571 aa22.03■■□□□ 1.12
COL4A2-208ENST00000483683 SETBP1Q9Y6X0 1596 aa22.01■■□□□ 1.11
COL4A2-208ENST00000483683 RBM33Q96EV2 1170 aaKnown RBP22.01■■□□□ 1.11
COL4A2-208ENST00000483683 NRXN3Q9Y4C0 1643 aa22.01■■□□□ 1.11
COL4A2-208ENST00000483683 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
COL4A2-208ENST00000483683 RPGRIP1LQ68CZ1 1315 aa21.99■■□□□ 1.11
COL4A2-208ENST00000483683 PTPRUQ92729 1446 aa21.98■■□□□ 1.11
COL4A2-208ENST00000483683 HRCP23327 699 aa21.97■■□□□ 1.11
COL4A2-208ENST00000483683 HSPA1LP34931 641 aa21.97■■□□□ 1.11
COL4A2-208ENST00000483683 CCDC144AA2RUR9 1427 aa21.97■■□□□ 1.11
COL4A2-208ENST00000483683 VGFO15240 615 aaPredicted RBP21.96■■□□□ 1.11
COL4A2-208ENST00000483683 SPATA31E1Q6ZUB1 1445 aa21.96■■□□□ 1.11
COL4A2-208ENST00000483683 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
COL4A2-208ENST00000483683 METP08581 1390 aa21.94■■□□□ 1.1
COL4A2-208ENST00000483683 NCOA3Q9Y6Q9 1424 aa21.93■■□□□ 1.1
COL4A2-208ENST00000483683 MSH6P52701 1360 aa21.9■■□□□ 1.1
COL4A2-208ENST00000483683 PPLO60437 1756 aa21.9■■□□□ 1.1
COL4A2-208ENST00000483683 RGL3Q3MIN7 710 aa21.9■■□□□ 1.1
COL4A2-208ENST00000483683 FAM135BQ49AJ0 1406 aa21.89■■□□□ 1.1
COL4A2-208ENST00000483683 XRN1Q8IZH2 1706 aaKnown RBP21.89■■□□□ 1.09
COL4A2-208ENST00000483683 ANKRD30BQ9BXX2 1392 aa21.87■■□□□ 1.09
COL4A2-208ENST00000483683 ADGRF5Q8IZF2 1346 aa21.86■■□□□ 1.09
COL4A2-208ENST00000483683 C19orf44Q9H6X5 657 aa21.86■■□□□ 1.09
COL4A2-208ENST00000483683 SETD1AO15047 1707 aaKnown RBP21.86■■□□□ 1.09
COL4A2-208ENST00000483683 SLAIN2Q9P270 581 aa21.85■■□□□ 1.09
COL4A2-208ENST00000483683 C14orf37Q86TY3 774 aa21.82■■□□□ 1.08
COL4A2-208ENST00000483683 IFT172Q9UG01 1749 aa21.82■■□□□ 1.08
COL4A2-208ENST00000483683 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.8■■□□□ 1.08
COL4A2-208ENST00000483683 DISP3Q9P2K9 1392 aa21.8■■□□□ 1.08
COL4A2-208ENST00000483683 CADPS2Q86UW7 1296 aa21.8■■□□□ 1.08
COL4A2-208ENST00000483683 PRAG1Q86YV5 1406 aa21.79■■□□□ 1.08
COL4A2-208ENST00000483683 ROBO1Q9Y6N7 1651 aa21.79■■□□□ 1.08
COL4A2-208ENST00000483683 ATF3P18847 181 aa21.77■■□□□ 1.08
COL4A2-208ENST00000483683 PTCH1Q13635 1447 aa21.77■■□□□ 1.08
COL4A2-208ENST00000483683 ROBO2Q9HCK4 1378 aa21.76■■□□□ 1.07
COL4A2-208ENST00000483683 PIK3C2GO75747 1445 aa21.76■■□□□ 1.07
COL4A2-208ENST00000483683 DCCP43146 1447 aa21.76■■□□□ 1.07
COL4A2-208ENST00000483683 ADGRL3Q9HAR2 1447 aa21.74■■□□□ 1.07
COL4A2-208ENST00000483683 NRXN1Q9ULB1 1477 aa21.74■■□□□ 1.07
COL4A2-208ENST00000483683 MYOM2P54296 1465 aa21.72■■□□□ 1.07
COL4A2-208ENST00000483683 C14orf93Q9H972 538 aaKnown RBP21.72■■□□□ 1.07
COL4A2-208ENST00000483683 ASXL1Q8IXJ9 1541 aa21.71■■□□□ 1.07
COL4A2-208ENST00000483683 TMEM132EQ6IEE7 984 aa21.71■■□□□ 1.07
COL4A2-208ENST00000483683 LRPPRCP42704 1394 aaKnown RBP21.7■■□□□ 1.06
COL4A2-208ENST00000483683 ABCC11Q96J66 1382 aa21.69■■□□□ 1.06
COL4A2-208ENST00000483683 TECPR2O15040 1411 aa21.69■■□□□ 1.06
COL4A2-208ENST00000483683 MST1RQ04912 1400 aa21.69■■□□□ 1.06
COL4A2-208ENST00000483683 MED1Q15648 1581 aaPredicted RBP21.69■■□□□ 1.06
COL4A2-208ENST00000483683 NALCNQ8IZF0 1738 aa21.69■■□□□ 1.06
COL4A2-208ENST00000483683 BRINP3Q76B58 766 aa21.68■■□□□ 1.06
COL4A2-208ENST00000483683 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
COL4A2-208ENST00000483683 ILDR2Q71H61 639 aa21.67■■□□□ 1.06
COL4A2-208ENST00000483683 STK26Q9P289 416 aa21.67■■□□□ 1.06
COL4A2-208ENST00000483683 DHX57Q6P158 1386 aaKnown RBP21.65■■□□□ 1.06
COL4A2-208ENST00000483683 YTHDC2Q9H6S0 1430 aaKnown RBP21.64■■□□□ 1.06
COL4A2-208ENST00000483683 DCAF11Q8TEB1 546 aa21.64■■□□□ 1.05
COL4A2-208ENST00000483683 STAC3Q96MF2 364 aa21.64■■□□□ 1.05
COL4A2-208ENST00000483683 AHDC1Q5TGY3 1603 aaPredicted RBP21.63■■□□□ 1.05
COL4A2-208ENST00000483683 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
COL4A2-208ENST00000483683 PHLPP1O60346 1717 aa21.63■■□□□ 1.05
COL4A2-208ENST00000483683 COL16A1Q07092 1604 aaPredicted RBP21.62■■□□□ 1.05
COL4A2-208ENST00000483683 SIRT1Q96EB6 747 aa21.62■■□□□ 1.05
COL4A2-208ENST00000483683 KDM2AQ9Y2K7 1162 aa21.62■■□□□ 1.05
COL4A2-208ENST00000483683 C1orf167Q5SNV9 1468 aa21.61■■□□□ 1.05
COL4A2-208ENST00000483683 PLEKHH1Q9ULM0 1364 aa21.61■■□□□ 1.05
COL4A2-208ENST00000483683 KNDC1Q76NI1 1749 aa21.6■■□□□ 1.05
COL4A2-208ENST00000483683 LAMC1P11047 1609 aa21.59■■□□□ 1.05
COL4A2-208ENST00000483683 JCADQ9P266 1359 aa21.59■■□□□ 1.05
COL4A2-208ENST00000483683 ADGRB1O14514 1584 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms