RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 RIMS2Q9UQ26 1411 aa38.28■■■■□ 3.72
PDCD4-208ENST00000483670 KIF1BO60333 1816 aa38.27■■■■□ 3.72
PDCD4-208ENST00000483670 ZNF335Q9H4Z2 1342 aaPredicted RBP38.26■■■■□ 3.72
PDCD4-208ENST00000483670 PPP1R15AO75807 674 aaPredicted RBP38.21■■■■□ 3.71
PDCD4-208ENST00000483670 IQSEC2Q5JU85 1478 aa38.2■■■■□ 3.71
PDCD4-208ENST00000483670 CPS1P31327 1500 aa38.19■■■■□ 3.7
PDCD4-208ENST00000483670 PLEKHG1Q9ULL1 1385 aa38.19■■■■□ 3.7
PDCD4-208ENST00000483670 FOXD1Q16676 465 aa38.17■■■■□ 3.7
PDCD4-208ENST00000483670 CCDC144AA2RUR9 1427 aa38.16■■■■□ 3.7
PDCD4-208ENST00000483670 ZNF326Q5BKZ1 582 aaKnown RBP38.14■■■■□ 3.7
PDCD4-208ENST00000483670 FBXO41Q8TF61 875 aa38.11■■■■□ 3.69
PDCD4-208ENST00000483670 BCANQ96GW7 911 aa38.11■■■■□ 3.69
PDCD4-208ENST00000483670 RPGRIP1LQ68CZ1 1315 aa38.06■■■■□ 3.68
PDCD4-208ENST00000483670 NEXMIFQ5QGS0 1516 aa38.05■■■■□ 3.68
PDCD4-208ENST00000483670 SLC26A8Q96RN1 970 aa38.04■■■■□ 3.68
PDCD4-208ENST00000483670 DIP2AQ14689 1571 aa38.04■■■■□ 3.68
PDCD4-208ENST00000483670 TRIM26Q12899 539 aaPredicted RBP38.01■■■■□ 3.68
PDCD4-208ENST00000483670 NUTM2DQ5VT03 806 aaPredicted RBP38.01■■■■□ 3.68
PDCD4-208ENST00000483670 TBX22Q9Y458 520 aa38.01■■■■□ 3.68
PDCD4-208ENST00000483670 STRCP1A6NGW2 1772 aa38■■■■□ 3.67
PDCD4-208ENST00000483670 VGFO15240 615 aaPredicted RBP37.97■■■■□ 3.67
PDCD4-208ENST00000483670 ILDR1Q86SU0 546 aaPredicted RBP37.97■■■■□ 3.67
PDCD4-208ENST00000483670 KCNA6P17658 529 aa37.96■■■■□ 3.67
PDCD4-208ENST00000483670 SETBP1Q9Y6X0 1596 aa37.96■■■■□ 3.67
PDCD4-208ENST00000483670 SPATA31E1Q6ZUB1 1445 aa37.95■■■■□ 3.67
PDCD4-208ENST00000483670 ADAMTS13Q76LX8 1427 aa37.95■■■■□ 3.67
PDCD4-208ENST00000483670 PIK3R4Q99570 1358 aa37.93■■■■□ 3.66
PDCD4-208ENST00000483670 ANKRD30BQ9BXX2 1392 aa37.93■■■■□ 3.66
PDCD4-208ENST00000483670 PPLO60437 1756 aa37.93■■■■□ 3.66
PDCD4-208ENST00000483670 NWD1Q149M9 1564 aa37.93■■■■□ 3.66
PDCD4-208ENST00000483670 LRRC7Q96NW7 1537 aa37.91■■■■□ 3.66
PDCD4-208ENST00000483670 CHD2O14647 1828 aaKnown RBP37.9■■■■□ 3.66
PDCD4-208ENST00000483670 NKTRP30414 1462 aaKnown RBP37.9■■■■□ 3.66
PDCD4-208ENST00000483670 NRXN3Q9Y4C0 1643 aa37.88■■■■□ 3.65
PDCD4-208ENST00000483670 SENP3Q9H4L4 574 aaPredicted RBP37.87■■■■□ 3.65
PDCD4-208ENST00000483670 RGL3Q3MIN7 710 aa37.84■■■■□ 3.65
PDCD4-208ENST00000483670 IFT172Q9UG01 1749 aa37.83■■■■□ 3.65
PDCD4-208ENST00000483670 UBAP1LF5GYI3 381 aa37.77■■■■□ 3.64
PDCD4-208ENST00000483670 PROSER2Q86WR7 435 aaPredicted RBP37.76■■■■□ 3.64
PDCD4-208ENST00000483670 TOM1O60784 492 aa37.75■■■■□ 3.63
PDCD4-208ENST00000483670 XIRP1Q702N8 1843 aaKnown RBP37.74■■■■□ 3.63
PDCD4-208ENST00000483670 TMEM94Q12767 1356 aa37.73■■■■□ 3.63
PDCD4-208ENST00000483670 ALKQ9UM73 1620 aa37.7■■■■□ 3.63
PDCD4-208ENST00000483670 NCOA3Q9Y6Q9 1424 aa37.7■■■■□ 3.62
PDCD4-208ENST00000483670 AMOTL2Q9Y2J4 779 aa37.69■■■■□ 3.62
PDCD4-208ENST00000483670 METP08581 1390 aa37.68■■■■□ 3.62
PDCD4-208ENST00000483670 SETD1AO15047 1707 aaKnown RBP37.68■■■■□ 3.62
PDCD4-208ENST00000483670 MYOM2P54296 1465 aa37.68■■■■□ 3.62
PDCD4-208ENST00000483670 XRN1Q8IZH2 1706 aaKnown RBP37.67■■■■□ 3.62
PDCD4-208ENST00000483670 ADGRF5Q8IZF2 1346 aa37.67■■■■□ 3.62
PDCD4-208ENST00000483670 STAC3Q96MF2 364 aa37.66■■■■□ 3.62
PDCD4-208ENST00000483670 PTPRUQ92729 1446 aa37.66■■■■□ 3.62
PDCD4-208ENST00000483670 PIK3C2GO75747 1445 aa37.64■■■■□ 3.62
PDCD4-208ENST00000483670 NRXN1Q9ULB1 1477 aa37.61■■■■□ 3.61
PDCD4-208ENST00000483670 MSH6P52701 1360 aa37.59■■■■□ 3.61
PDCD4-208ENST00000483670 LAMC1P11047 1609 aa37.57■■■■□ 3.6
PDCD4-208ENST00000483670 PRAG1Q86YV5 1406 aa37.56■■■■□ 3.6
PDCD4-208ENST00000483670 DHX57Q6P158 1386 aaKnown RBP37.55■■■■□ 3.6
PDCD4-208ENST00000483670 RBM33Q96EV2 1170 aaKnown RBP37.53■■■■□ 3.6
PDCD4-208ENST00000483670 PTCH1Q13635 1447 aa37.53■■■■□ 3.6
PDCD4-208ENST00000483670 C14orf37Q86TY3 774 aa37.52■■■■□ 3.6
PDCD4-208ENST00000483670 PIP4K2BP78356 416 aa37.51■■■■□ 3.6
PDCD4-208ENST00000483670 DCAF11Q8TEB1 546 aa37.51■■■■□ 3.6
PDCD4-208ENST00000483670 SCAF1Q9H7N4 1312 aaKnown RBP37.5■■■■□ 3.59
PDCD4-208ENST00000483670 C19orf44Q9H6X5 657 aa37.49■■■■□ 3.59
PDCD4-208ENST00000483670 C14orf93Q9H972 538 aaKnown RBP37.49■■■■□ 3.59
PDCD4-208ENST00000483670 KDM2AQ9Y2K7 1162 aa37.43■■■■□ 3.58
PDCD4-208ENST00000483670 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.43■■■■□ 3.58
PDCD4-208ENST00000483670 DCCP43146 1447 aa37.43■■■■□ 3.58
PDCD4-208ENST00000483670 LRPPRCP42704 1394 aaKnown RBP37.42■■■■□ 3.58
PDCD4-208ENST00000483670 CADPS2Q86UW7 1296 aa37.42■■■■□ 3.58
PDCD4-208ENST00000483670 TECPR2O15040 1411 aa37.42■■■■□ 3.58
PDCD4-208ENST00000483670 KNDC1Q76NI1 1749 aa37.41■■■■□ 3.58
PDCD4-208ENST00000483670 ASXL1Q8IXJ9 1541 aa37.41■■■■□ 3.58
PDCD4-208ENST00000483670 ATF3P18847 181 aa37.4■■■■□ 3.58
PDCD4-208ENST00000483670 ABCC11Q96J66 1382 aa37.4■■■■□ 3.58
PDCD4-208ENST00000483670 CFAP70Q5T0N1 1121 aa37.39■■■■□ 3.58
PDCD4-208ENST00000483670 ROBO2Q9HCK4 1378 aa37.39■■■■□ 3.58
PDCD4-208ENST00000483670 FAM135BQ49AJ0 1406 aa37.38■■■■□ 3.57
PDCD4-208ENST00000483670 ADGRL3Q9HAR2 1447 aa37.38■■■■□ 3.57
PDCD4-208ENST00000483670 YTHDC2Q9H6S0 1430 aaKnown RBP37.37■■■■□ 3.57
PDCD4-208ENST00000483670 TMEM132EQ6IEE7 984 aa37.36■■■■□ 3.57
PDCD4-208ENST00000483670 SLAIN2Q9P270 581 aa37.35■■■■□ 3.57
PDCD4-208ENST00000483670 NALCNQ8IZF0 1738 aa37.33■■■■□ 3.57
PDCD4-208ENST00000483670 SIN3AQ96ST3 1273 aa37.32■■■■□ 3.56
PDCD4-208ENST00000483670 STK26Q9P289 416 aa37.32■■■■□ 3.56
PDCD4-208ENST00000483670 SIRT1Q96EB6 747 aa37.31■■■■□ 3.56
PDCD4-208ENST00000483670 PCGF6Q9BYE7 350 aa37.31■■■■□ 3.56
PDCD4-208ENST00000483670 ROBO1Q9Y6N7 1651 aa37.28■■■■□ 3.56
PDCD4-208ENST00000483670 NEUROD1Q13562 356 aa37.28■■■■□ 3.56
PDCD4-208ENST00000483670 ADGRB1O14514 1584 aa37.28■■■■□ 3.56
PDCD4-208ENST00000483670 KIAA1210Q9ULL0 1709 aa37.27■■■■□ 3.56
PDCD4-208ENST00000483670 HSPA1LP34931 641 aa37.26■■■■□ 3.56
PDCD4-208ENST00000483670 L3MBTL2Q969R5 705 aa37.24■■■■□ 3.55
PDCD4-208ENST00000483670 DLC1Q96QB1 1528 aa37.24■■■■□ 3.55
PDCD4-208ENST00000483670 MST1RQ04912 1400 aa37.19■■■■□ 3.54
PDCD4-208ENST00000483670 CDC42BPGQ6DT37 1551 aa37.18■■■■□ 3.54
PDCD4-208ENST00000483670 WAPLQ7Z5K2 1190 aa37.17■■■■□ 3.54
PDCD4-208ENST00000483670 TONSLQ96HA7 1378 aa37.12■■■■□ 3.53
PDCD4-208ENST00000483670 PLEKHH1Q9ULM0 1364 aa37.12■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms