RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
PTPN18-212ENST00000483617 PIP4K2BP78356 416 aa16.76■□□□□ 0.27
PTPN18-212ENST00000483617 ZFYVE9O95405 1425 aa16.76■□□□□ 0.27
PTPN18-212ENST00000483617 MYO5BQ9ULV0 1848 aa16.75■□□□□ 0.27
PTPN18-212ENST00000483617 RAB3GAP2Q9H2M9 1393 aa16.75■□□□□ 0.27
PTPN18-212ENST00000483617 DISP3Q9P2K9 1392 aa16.75■□□□□ 0.27
PTPN18-212ENST00000483617 NAIPQ13075 1403 aa16.72■□□□□ 0.27
PTPN18-212ENST00000483617 RIMS2Q9UQ26 1411 aa16.72■□□□□ 0.27
PTPN18-212ENST00000483617 NWD1Q149M9 1564 aa16.72■□□□□ 0.27
PTPN18-212ENST00000483617 XIRP1Q702N8 1843 aaKnown RBP16.71■□□□□ 0.27
PTPN18-212ENST00000483617 ZEB1P37275 1124 aaPredicted RBP16.71■□□□□ 0.27
PTPN18-212ENST00000483617 SLC26A8Q96RN1 970 aa16.71■□□□□ 0.27
PTPN18-212ENST00000483617 PLEKHG1Q9ULL1 1385 aa16.71■□□□□ 0.27
PTPN18-212ENST00000483617 HSPA1LP34931 641 aa16.7■□□□□ 0.26
PTPN18-212ENST00000483617 SPHKAPQ2M3C7 1700 aa16.7■□□□□ 0.26
PTPN18-212ENST00000483617 NKTRP30414 1462 aaKnown RBP16.69■□□□□ 0.26
PTPN18-212ENST00000483617 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
PTPN18-212ENST00000483617 CHGAP10645 457 aaKnown RBP16.69■□□□□ 0.26
PTPN18-212ENST00000483617 KCNA6P17658 529 aa16.69■□□□□ 0.26
PTPN18-212ENST00000483617 HDGFP51858 240 aaKnown RBP16.68■□□□□ 0.26
PTPN18-212ENST00000483617 BCANQ96GW7 911 aa16.68■□□□□ 0.26
PTPN18-212ENST00000483617 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
PTPN18-212ENST00000483617 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTPN18-212ENST00000483617 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
PTPN18-212ENST00000483617 TRIM52Q96A61 297 aa16.64■□□□□ 0.25
PTPN18-212ENST00000483617 SENP3Q9H4L4 574 aaPredicted RBP16.64■□□□□ 0.25
PTPN18-212ENST00000483617 CLSPNQ9HAW4 1339 aa16.64■□□□□ 0.25
PTPN18-212ENST00000483617 TRPM2O94759 1503 aa16.63■□□□□ 0.25
PTPN18-212ENST00000483617 ADAMTS13Q76LX8 1427 aa16.62■□□□□ 0.25
PTPN18-212ENST00000483617 CHD2O14647 1828 aaKnown RBP16.62■□□□□ 0.25
PTPN18-212ENST00000483617 CLTCL1P53675 1640 aa16.62■□□□□ 0.25
PTPN18-212ENST00000483617 MED1Q15648 1581 aaPredicted RBP16.61■□□□□ 0.25
PTPN18-212ENST00000483617 NUTM2DQ5VT03 806 aaPredicted RBP16.61■□□□□ 0.25
PTPN18-212ENST00000483617 PROSER2Q86WR7 435 aaPredicted RBP16.61■□□□□ 0.25
PTPN18-212ENST00000483617 ILDR2Q71H61 639 aa16.6■□□□□ 0.25
PTPN18-212ENST00000483617 TBX22Q9Y458 520 aa16.6■□□□□ 0.25
PTPN18-212ENST00000483617 DHX57Q6P158 1386 aaKnown RBP16.6■□□□□ 0.25
PTPN18-212ENST00000483617 RBM33Q96EV2 1170 aaKnown RBP16.59■□□□□ 0.25
PTPN18-212ENST00000483617 PIK3R4Q99570 1358 aa16.58■□□□□ 0.24
PTPN18-212ENST00000483617 NRXN3Q9Y4C0 1643 aa16.57■□□□□ 0.24
PTPN18-212ENST00000483617 SETBP1Q9Y6X0 1596 aa16.57■□□□□ 0.24
PTPN18-212ENST00000483617 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
PTPN18-212ENST00000483617 MSH6P52701 1360 aa16.57■□□□□ 0.24
PTPN18-212ENST00000483617 ROBO1Q9Y6N7 1651 aa16.56■□□□□ 0.24
PTPN18-212ENST00000483617 NEXMIFQ5QGS0 1516 aa16.55■□□□□ 0.24
PTPN18-212ENST00000483617 KIF1BO60333 1816 aa16.55■□□□□ 0.24
PTPN18-212ENST00000483617 ZNF326Q5BKZ1 582 aaKnown RBP16.55■□□□□ 0.24
PTPN18-212ENST00000483617 NCOA3Q9Y6Q9 1424 aa16.54■□□□□ 0.24
PTPN18-212ENST00000483617 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
PTPN18-212ENST00000483617 PTPRUQ92729 1446 aa16.53■□□□□ 0.24
PTPN18-212ENST00000483617 XRN1Q8IZH2 1706 aaKnown RBP16.52■□□□□ 0.24
PTPN18-212ENST00000483617 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
PTPN18-212ENST00000483617 C14orf37Q86TY3 774 aa16.49■□□□□ 0.23
PTPN18-212ENST00000483617 AMOTL2Q9Y2J4 779 aa16.49■□□□□ 0.23
PTPN18-212ENST00000483617 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.48■□□□□ 0.23
PTPN18-212ENST00000483617 SOCS7O14512 581 aa16.48■□□□□ 0.23
PTPN18-212ENST00000483617 SLAIN2Q9P270 581 aa16.47■□□□□ 0.23
PTPN18-212ENST00000483617 METP08581 1390 aa16.47■□□□□ 0.23
PTPN18-212ENST00000483617 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
PTPN18-212ENST00000483617 C19orf44Q9H6X5 657 aa16.45■□□□□ 0.22
PTPN18-212ENST00000483617 PHLPP1O60346 1717 aa16.45■□□□□ 0.22
PTPN18-212ENST00000483617 DCCP43146 1447 aa16.45■□□□□ 0.22
PTPN18-212ENST00000483617 PPLO60437 1756 aa16.44■□□□□ 0.22
PTPN18-212ENST00000483617 FOXD1Q16676 465 aa16.44■□□□□ 0.22
PTPN18-212ENST00000483617 CADPS2Q86UW7 1296 aa16.44■□□□□ 0.22
PTPN18-212ENST00000483617 SETD1AO15047 1707 aaKnown RBP16.44■□□□□ 0.22
PTPN18-212ENST00000483617 RPGRIP1LQ68CZ1 1315 aa16.44■□□□□ 0.22
PTPN18-212ENST00000483617 VGFO15240 615 aaPredicted RBP16.43■□□□□ 0.22
PTPN18-212ENST00000483617 ATF3P18847 181 aa16.43■□□□□ 0.22
PTPN18-212ENST00000483617 CCDC144AA2RUR9 1427 aa16.43■□□□□ 0.22
PTPN18-212ENST00000483617 COL16A1Q07092 1604 aaPredicted RBP16.41■□□□□ 0.22
PTPN18-212ENST00000483617 AHDC1Q5TGY3 1603 aaPredicted RBP16.41■□□□□ 0.22
PTPN18-212ENST00000483617 PTCH1Q13635 1447 aa16.4■□□□□ 0.22
PTPN18-212ENST00000483617 ADGRL3Q9HAR2 1447 aa16.4■□□□□ 0.22
PTPN18-212ENST00000483617 NEUROD1Q13562 356 aa16.39■□□□□ 0.21
PTPN18-212ENST00000483617 TIMELESSQ9UNS1 1208 aa16.39■□□□□ 0.21
PTPN18-212ENST00000483617 NALCNQ8IZF0 1738 aa16.39■□□□□ 0.21
PTPN18-212ENST00000483617 JCADQ9P266 1359 aa16.38■□□□□ 0.21
PTPN18-212ENST00000483617 SPATA31E1Q6ZUB1 1445 aa16.38■□□□□ 0.21
PTPN18-212ENST00000483617 PRAG1Q86YV5 1406 aa16.38■□□□□ 0.21
PTPN18-212ENST00000483617 MST1RQ04912 1400 aa16.37■□□□□ 0.21
PTPN18-212ENST00000483617 IFT172Q9UG01 1749 aa16.36■□□□□ 0.21
PTPN18-212ENST00000483617 ASXL1Q8IXJ9 1541 aa16.36■□□□□ 0.21
PTPN18-212ENST00000483617 BRINP3Q76B58 766 aa16.35■□□□□ 0.21
PTPN18-212ENST00000483617 TONSLQ96HA7 1378 aa16.34■□□□□ 0.21
PTPN18-212ENST00000483617 ANKRD30BQ9BXX2 1392 aa16.34■□□□□ 0.21
PTPN18-212ENST00000483617 ROBO2Q9HCK4 1378 aa16.34■□□□□ 0.21
PTPN18-212ENST00000483617 SIN3AQ96ST3 1273 aa16.33■□□□□ 0.2
PTPN18-212ENST00000483617 RGS17Q9UGC6 210 aaPredicted RBP16.33■□□□□ 0.2
PTPN18-212ENST00000483617 SHPRHQ149N8 1683 aa16.32■□□□□ 0.2
PTPN18-212ENST00000483617 RGL3Q3MIN7 710 aa16.32■□□□□ 0.2
PTPN18-212ENST00000483617 NHSL1Q5SYE7 1610 aa16.32■□□□□ 0.2
PTPN18-212ENST00000483617 ADGRF5Q8IZF2 1346 aa16.32■□□□□ 0.2
PTPN18-212ENST00000483617 PIK3C2GO75747 1445 aa16.31■□□□□ 0.2
PTPN18-212ENST00000483617 SPATA31A6Q5VVP1 1343 aa16.3■□□□□ 0.2
PTPN18-212ENST00000483617 LRP6O75581 1613 aa16.3■□□□□ 0.2
PTPN18-212ENST00000483617 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
PTPN18-212ENST00000483617 KNDC1Q76NI1 1749 aa16.28■□□□□ 0.2
PTPN18-212ENST00000483617 TECPR2O15040 1411 aa16.28■□□□□ 0.2
PTPN18-212ENST00000483617 MYOM2P54296 1465 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms