RNA–Protein interactions for RNA: ENST00000483474.1

RTCA-204, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 3

Gene RTCA, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-204ENST00000483474 RIMS2Q9UQ26 1411 aa26.03■■□□□ 1.76
RTCA-204ENST00000483474 SLC4A1APQ9BWU0 796 aaKnown RBP26.01■■□□□ 1.75
RTCA-204ENST00000483474 ACIN1Q9UKV3 1341 aaKnown RBP26.01■■□□□ 1.75
RTCA-204ENST00000483474 STRCP1A6NGW2 1772 aa26■■□□□ 1.75
RTCA-204ENST00000483474 SLC26A8Q96RN1 970 aa25.98■■□□□ 1.75
RTCA-204ENST00000483474 ZFYVE9O95405 1425 aa25.97■■□□□ 1.75
RTCA-204ENST00000483474 SCAF1Q9H7N4 1312 aaKnown RBP25.97■■□□□ 1.75
RTCA-204ENST00000483474 ZNF326Q5BKZ1 582 aaKnown RBP25.97■■□□□ 1.75
RTCA-204ENST00000483474 PLEKHG1Q9ULL1 1385 aa25.96■■□□□ 1.75
RTCA-204ENST00000483474 KIF1BO60333 1816 aa25.96■■□□□ 1.75
RTCA-204ENST00000483474 LRRC7Q96NW7 1537 aa25.93■■□□□ 1.74
RTCA-204ENST00000483474 KCNA6P17658 529 aa25.93■■□□□ 1.74
RTCA-204ENST00000483474 SENP3Q9H4L4 574 aaPredicted RBP25.93■■□□□ 1.74
RTCA-204ENST00000483474 TRPM2O94759 1503 aa25.92■■□□□ 1.74
RTCA-204ENST00000483474 PIP4K2BP78356 416 aa25.91■■□□□ 1.74
RTCA-204ENST00000483474 NUTM2DQ5VT03 806 aaPredicted RBP25.91■■□□□ 1.74
RTCA-204ENST00000483474 PROSER2Q86WR7 435 aaPredicted RBP25.88■■□□□ 1.73
RTCA-204ENST00000483474 TBX22Q9Y458 520 aa25.88■■□□□ 1.73
RTCA-204ENST00000483474 CLTCL1P53675 1640 aa25.88■■□□□ 1.73
RTCA-204ENST00000483474 SETD5Q9C0A6 1442 aa25.87■■□□□ 1.73
RTCA-204ENST00000483474 CHD2O14647 1828 aaKnown RBP25.86■■□□□ 1.73
RTCA-204ENST00000483474 DIP2AQ14689 1571 aa25.85■■□□□ 1.73
RTCA-204ENST00000483474 MPHOSPH9Q99550 1183 aa25.83■■□□□ 1.73
RTCA-204ENST00000483474 NKTRP30414 1462 aaKnown RBP25.83■■□□□ 1.73
RTCA-204ENST00000483474 XIRP1Q702N8 1843 aaKnown RBP25.82■■□□□ 1.72
RTCA-204ENST00000483474 NWD1Q149M9 1564 aa25.81■■□□□ 1.72
RTCA-204ENST00000483474 TMEM94Q12767 1356 aa25.8■■□□□ 1.72
RTCA-204ENST00000483474 PIK3R4Q99570 1358 aa25.8■■□□□ 1.72
RTCA-204ENST00000483474 VGFO15240 615 aaPredicted RBP25.78■■□□□ 1.72
RTCA-204ENST00000483474 FOXD1Q16676 465 aa25.77■■□□□ 1.72
RTCA-204ENST00000483474 RPGRIP1LQ68CZ1 1315 aa25.76■■□□□ 1.71
RTCA-204ENST00000483474 CCDC144AA2RUR9 1427 aa25.76■■□□□ 1.71
RTCA-204ENST00000483474 ADAMTS13Q76LX8 1427 aa25.76■■□□□ 1.71
RTCA-204ENST00000483474 MSH6P52701 1360 aa25.74■■□□□ 1.71
RTCA-204ENST00000483474 C14orf37Q86TY3 774 aa25.74■■□□□ 1.71
RTCA-204ENST00000483474 NEXMIFQ5QGS0 1516 aa25.73■■□□□ 1.71
RTCA-204ENST00000483474 RAB3GAP2Q9H2M9 1393 aa25.73■■□□□ 1.71
RTCA-204ENST00000483474 SETBP1Q9Y6X0 1596 aa25.73■■□□□ 1.71
RTCA-204ENST00000483474 HSPA1LP34931 641 aa25.72■■□□□ 1.71
RTCA-204ENST00000483474 RBM33Q96EV2 1170 aaKnown RBP25.71■■□□□ 1.71
RTCA-204ENST00000483474 AMOTL2Q9Y2J4 779 aa25.71■■□□□ 1.71
RTCA-204ENST00000483474 ALKQ9UM73 1620 aa25.69■■□□□ 1.7
RTCA-204ENST00000483474 NCOA3Q9Y6Q9 1424 aa25.69■■□□□ 1.7
RTCA-204ENST00000483474 PPLO60437 1756 aa25.67■■□□□ 1.7
RTCA-204ENST00000483474 NRXN3Q9Y4C0 1643 aa25.66■■□□□ 1.7
RTCA-204ENST00000483474 RGL3Q3MIN7 710 aa25.66■■□□□ 1.7
RTCA-204ENST00000483474 HRCP23327 699 aa25.65■■□□□ 1.7
RTCA-204ENST00000483474 DISP3Q9P2K9 1392 aa25.64■■□□□ 1.69
RTCA-204ENST00000483474 ATF3P18847 181 aa25.62■■□□□ 1.69
RTCA-204ENST00000483474 C19orf44Q9H6X5 657 aa25.61■■□□□ 1.69
RTCA-204ENST00000483474 FAM135BQ49AJ0 1406 aa25.61■■□□□ 1.69
RTCA-204ENST00000483474 CADPS2Q86UW7 1296 aa25.6■■□□□ 1.69
RTCA-204ENST00000483474 SLAIN2Q9P270 581 aa25.6■■□□□ 1.69
RTCA-204ENST00000483474 PTPRUQ92729 1446 aa25.6■■□□□ 1.69
RTCA-204ENST00000483474 METP08581 1390 aa25.59■■□□□ 1.69
RTCA-204ENST00000483474 ANKRD30BQ9BXX2 1392 aa25.59■■□□□ 1.69
RTCA-204ENST00000483474 XRN1Q8IZH2 1706 aaKnown RBP25.58■■□□□ 1.69
RTCA-204ENST00000483474 ROBO1Q9Y6N7 1651 aa25.56■■□□□ 1.68
RTCA-204ENST00000483474 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.56■■□□□ 1.68
RTCA-204ENST00000483474 SPATA31E1Q6ZUB1 1445 aa25.55■■□□□ 1.68
RTCA-204ENST00000483474 IFT172Q9UG01 1749 aa25.53■■□□□ 1.68
RTCA-204ENST00000483474 SETD1AO15047 1707 aaKnown RBP25.51■■□□□ 1.67
RTCA-204ENST00000483474 ADGRF5Q8IZF2 1346 aa25.5■■□□□ 1.67
RTCA-204ENST00000483474 DCCP43146 1447 aa25.49■■□□□ 1.67
RTCA-204ENST00000483474 PHLPP1O60346 1717 aa25.46■■□□□ 1.67
RTCA-204ENST00000483474 PTCH1Q13635 1447 aa25.45■■□□□ 1.66
RTCA-204ENST00000483474 MED1Q15648 1581 aaPredicted RBP25.44■■□□□ 1.66
RTCA-204ENST00000483474 PHF23Q9BUL5 403 aaPredicted RBP25.43■■□□□ 1.66
RTCA-204ENST00000483474 ADGRL3Q9HAR2 1447 aa25.43■■□□□ 1.66
RTCA-204ENST00000483474 PIK3C2GO75747 1445 aa25.4■■□□□ 1.66
RTCA-204ENST00000483474 STK26Q9P289 416 aa25.4■■□□□ 1.66
RTCA-204ENST00000483474 NALCNQ8IZF0 1738 aa25.4■■□□□ 1.66
RTCA-204ENST00000483474 STAC3Q96MF2 364 aa25.39■■□□□ 1.66
RTCA-204ENST00000483474 ROBO2Q9HCK4 1378 aa25.39■■□□□ 1.65
RTCA-204ENST00000483474 MYOM2P54296 1465 aa25.39■■□□□ 1.65
RTCA-204ENST00000483474 LAMC1P11047 1609 aa25.38■■□□□ 1.65
RTCA-204ENST00000483474 PRAG1Q86YV5 1406 aa25.37■■□□□ 1.65
RTCA-204ENST00000483474 C14orf93Q9H972 538 aaKnown RBP25.36■■□□□ 1.65
RTCA-204ENST00000483474 LRPPRCP42704 1394 aaKnown RBP25.35■■□□□ 1.65
RTCA-204ENST00000483474 TMEM132EQ6IEE7 984 aa25.35■■□□□ 1.65
RTCA-204ENST00000483474 DCAF11Q8TEB1 546 aa25.35■■□□□ 1.65
RTCA-204ENST00000483474 DHX57Q6P158 1386 aaKnown RBP25.34■■□□□ 1.65
RTCA-204ENST00000483474 BRINP3Q76B58 766 aa25.34■■□□□ 1.65
RTCA-204ENST00000483474 KDM2AQ9Y2K7 1162 aa25.34■■□□□ 1.65
RTCA-204ENST00000483474 MST1RQ04912 1400 aa25.34■■□□□ 1.65
RTCA-204ENST00000483474 JCADQ9P266 1359 aa25.33■■□□□ 1.65
RTCA-204ENST00000483474 ABCC11Q96J66 1382 aa25.32■■□□□ 1.64
RTCA-204ENST00000483474 KNDC1Q76NI1 1749 aa25.32■■□□□ 1.64
RTCA-204ENST00000483474 AHDC1Q5TGY3 1603 aaPredicted RBP25.32■■□□□ 1.64
RTCA-204ENST00000483474 NRXN1Q9ULB1 1477 aa25.32■■□□□ 1.64
RTCA-204ENST00000483474 YTHDC2Q9H6S0 1430 aaKnown RBP25.31■■□□□ 1.64
RTCA-204ENST00000483474 CFAP70Q5T0N1 1121 aa25.31■■□□□ 1.64
RTCA-204ENST00000483474 TECPR2O15040 1411 aa25.29■■□□□ 1.64
RTCA-204ENST00000483474 ASXL1Q8IXJ9 1541 aa25.29■■□□□ 1.64
RTCA-204ENST00000483474 COL16A1Q07092 1604 aaPredicted RBP25.29■■□□□ 1.64
RTCA-204ENST00000483474 ILDR2Q71H61 639 aa25.28■■□□□ 1.64
RTCA-204ENST00000483474 WAPLQ7Z5K2 1190 aa25.27■■□□□ 1.64
RTCA-204ENST00000483474 SIRT1Q96EB6 747 aa25.27■■□□□ 1.64
RTCA-204ENST00000483474 C1orf167Q5SNV9 1468 aa25.25■■□□□ 1.63
RTCA-204ENST00000483474 LRRC59Q96AG4 307 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms