RNA–Protein interactions for RNA: ENST00000483145.1

CCDC57-209, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-209ENST00000483145 NEUROD1Q13562 356 aa15.2■□□□□ 0.02
CCDC57-209ENST00000483145 STAG3Q9UJ98 1225 aa15.2■□□□□ 0.02
CCDC57-209ENST00000483145 NPHP4O75161 1426 aaPredicted RBP15.19■□□□□ 0.02
CCDC57-209ENST00000483145 IFT172Q9UG01 1749 aa15.19■□□□□ 0.02
CCDC57-209ENST00000483145 UBAP1LF5GYI3 381 aa15.18■□□□□ 0.02
CCDC57-209ENST00000483145 PPLO60437 1756 aa15.18■□□□□ 0.02
CCDC57-209ENST00000483145 MED14O60244 1454 aa15.17■□□□□ 0.02
CCDC57-209ENST00000483145 TONSLQ96HA7 1378 aa15.17■□□□□ 0.02
CCDC57-209ENST00000483145 TIMELESSQ9UNS1 1208 aa15.17■□□□□ 0.02
CCDC57-209ENST00000483145 NEXMIFQ5QGS0 1516 aa15.17■□□□□ 0.02
CCDC57-209ENST00000483145 IQGAP1P46940 1657 aa15.16■□□□□ 0.02
CCDC57-209ENST00000483145 CHGAP10645 457 aaKnown RBP15.16■□□□□ 0.02
CCDC57-209ENST00000483145 SLIT1O75093 1534 aa15.16■□□□□ 0.02
CCDC57-209ENST00000483145 CPS1P31327 1500 aa15.16■□□□□ 0.02
CCDC57-209ENST00000483145 RPGRIP1LQ68CZ1 1315 aa15.16■□□□□ 0.02
CCDC57-209ENST00000483145 EID1Q9Y6B2 187 aa15.15■□□□□ 0.02
CCDC57-209ENST00000483145 ARHGAP23Q9P227 1491 aa15.14■□□□□ 0.01
CCDC57-209ENST00000483145 TMEM2Q9UHN6 1383 aa15.14■□□□□ 0.01
CCDC57-209ENST00000483145 ZFYVE9O95405 1425 aa15.14■□□□□ 0.01
CCDC57-209ENST00000483145 MYOM2P54296 1465 aa15.14■□□□□ 0.01
CCDC57-209ENST00000483145 SCAF11Q99590 1463 aaKnown RBP15.14■□□□□ 0.01
CCDC57-209ENST00000483145 RGL3Q3MIN7 710 aa15.13■□□□□ 0.01
CCDC57-209ENST00000483145 ZNF326Q5BKZ1 582 aaKnown RBP15.13■□□□□ 0.01
CCDC57-209ENST00000483145 TXNDC2Q86VQ3 553 aa15.13■□□□□ 0.01
CCDC57-209ENST00000483145 L3MBTL2Q969R5 705 aa15.13■□□□□ 0.01
CCDC57-209ENST00000483145 RIMS2Q9UQ26 1411 aa15.12■□□□□ 0.01
CCDC57-209ENST00000483145 STAC3Q96MF2 364 aa15.12■□□□□ 0.01
CCDC57-209ENST00000483145 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
CCDC57-209ENST00000483145 NRXN1Q9ULB1 1477 aa15.1■□□□□ 0.01
CCDC57-209ENST00000483145 TOM1O60784 492 aa15.1■□□□□ 0.01
CCDC57-209ENST00000483145 LTKP29376 864 aa15.09■□□□□ 0.01
CCDC57-209ENST00000483145 ZEB1P37275 1124 aaPredicted RBP15.08■□□□□ 0
CCDC57-209ENST00000483145 HDGFP51858 240 aaKnown RBP15.08■□□□□ 0
CCDC57-209ENST00000483145 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.08■□□□□ 0
CCDC57-209ENST00000483145 DCAF11Q8TEB1 546 aa15.08■□□□□ 0
CCDC57-209ENST00000483145 PIP4K2BP78356 416 aa15.07■□□□□ 0
CCDC57-209ENST00000483145 PRAG1Q86YV5 1406 aa15.07■□□□□ 0
CCDC57-209ENST00000483145 VGFO15240 615 aaPredicted RBP15.06■□□□□ 0
CCDC57-209ENST00000483145 PIK3C2GO75747 1445 aa15.06■□□□□ 0
CCDC57-209ENST00000483145 DISP3Q9P2K9 1392 aa15.05■□□□□ -0
CCDC57-209ENST00000483145 SETBP1Q9Y6X0 1596 aa15.05■□□□□ -0
CCDC57-209ENST00000483145 KIAA1210Q9ULL0 1709 aa15.04■□□□□ -0
CCDC57-209ENST00000483145 LAMC1P11047 1609 aa15.04■□□□□ -0
CCDC57-209ENST00000483145 PLEKHG1Q9ULL1 1385 aa15.04■□□□□ -0
CCDC57-209ENST00000483145 ADGRF5Q8IZF2 1346 aa15.04■□□□□ -0
CCDC57-209ENST00000483145 PPP1R15AO75807 674 aaPredicted RBP15.04■□□□□ -0
CCDC57-209ENST00000483145 BCANQ96GW7 911 aa15.04■□□□□ -0
CCDC57-209ENST00000483145 KDM2AQ9Y2K7 1162 aa15.04■□□□□ -0
CCDC57-209ENST00000483145 NRXN3Q9Y4C0 1643 aa15.03■□□□□ -0
CCDC57-209ENST00000483145 STRCP1A6NGW2 1772 aa15.03■□□□□ -0
CCDC57-209ENST00000483145 NUTM2DQ5VT03 806 aaPredicted RBP15.02■□□□□ -0
CCDC57-209ENST00000483145 TRPM1Q7Z4N2 1603 aa15.02□□□□□ -0.01
CCDC57-209ENST00000483145 LRRC7Q96NW7 1537 aa15.02□□□□□ -0.01
CCDC57-209ENST00000483145 SETD1AO15047 1707 aaKnown RBP15.01□□□□□ -0.01
CCDC57-209ENST00000483145 DIP2AQ14689 1571 aa15.01□□□□□ -0.01
CCDC57-209ENST00000483145 RALGAPBQ86X10 1494 aa15.01□□□□□ -0.01
CCDC57-209ENST00000483145 ALKQ9UM73 1620 aa14.99□□□□□ -0.01
CCDC57-209ENST00000483145 NBPF8Q3BBV2 869 aa14.99□□□□□ -0.01
CCDC57-209ENST00000483145 SLC26A8Q96RN1 970 aa14.99□□□□□ -0.01
CCDC57-209ENST00000483145 SENP3Q9H4L4 574 aaPredicted RBP14.98□□□□□ -0.01
CCDC57-209ENST00000483145 ADAMTS13Q76LX8 1427 aa14.98□□□□□ -0.01
CCDC57-209ENST00000483145 HSPA1LP34931 641 aa14.97□□□□□ -0.01
CCDC57-209ENST00000483145 C14orf93Q9H972 538 aaKnown RBP14.97□□□□□ -0.01
CCDC57-209ENST00000483145 KCNA6P17658 529 aa14.96□□□□□ -0.01
CCDC57-209ENST00000483145 GPRASP1Q5JY77 1395 aa14.96□□□□□ -0.02
CCDC57-209ENST00000483145 ADGRB1O14514 1584 aa14.95□□□□□ -0.02
CCDC57-209ENST00000483145 ASXL1Q8IXJ9 1541 aa14.95□□□□□ -0.02
CCDC57-209ENST00000483145 CFAP70Q5T0N1 1121 aa14.94□□□□□ -0.02
CCDC57-209ENST00000483145 PROSER2Q86WR7 435 aaPredicted RBP14.94□□□□□ -0.02
CCDC57-209ENST00000483145 ROCK2O75116 1388 aaKnown RBP14.94□□□□□ -0.02
CCDC57-209ENST00000483145 TBX22Q9Y458 520 aa14.93□□□□□ -0.02
CCDC57-209ENST00000483145 TMEM94Q12767 1356 aa14.92□□□□□ -0.02
CCDC57-209ENST00000483145 PIK3R4Q99570 1358 aa14.92□□□□□ -0.02
CCDC57-209ENST00000483145 XIRP1Q702N8 1843 aaKnown RBP14.91□□□□□ -0.02
CCDC57-209ENST00000483145 NKTRP30414 1462 aaKnown RBP14.9□□□□□ -0.02
CCDC57-209ENST00000483145 METP08581 1390 aa14.9□□□□□ -0.02
CCDC57-209ENST00000483145 KNDC1Q76NI1 1749 aa14.9□□□□□ -0.02
CCDC57-209ENST00000483145 NBPF1Q3BBV0 1214 aa14.9□□□□□ -0.02
CCDC57-209ENST00000483145 CHD2O14647 1828 aaKnown RBP14.89□□□□□ -0.03
CCDC57-209ENST00000483145 RBM33Q96EV2 1170 aaKnown RBP14.89□□□□□ -0.03
CCDC57-209ENST00000483145 NWD1Q149M9 1564 aa14.89□□□□□ -0.03
CCDC57-209ENST00000483145 XRN1Q8IZH2 1706 aaKnown RBP14.89□□□□□ -0.03
CCDC57-209ENST00000483145 ILDR2Q71H61 639 aa14.88□□□□□ -0.03
CCDC57-209ENST00000483145 TECPR2O15040 1411 aa14.88□□□□□ -0.03
CCDC57-209ENST00000483145 YTHDC2Q9H6S0 1430 aaKnown RBP14.88□□□□□ -0.03
CCDC57-209ENST00000483145 LRPPRCP42704 1394 aaKnown RBP14.87□□□□□ -0.03
CCDC57-209ENST00000483145 MSH6P52701 1360 aa14.87□□□□□ -0.03
CCDC57-209ENST00000483145 ARHGEF28Q8N1W1 1705 aaKnown RBP14.87□□□□□ -0.03
CCDC57-209ENST00000483145 TMEM132EQ6IEE7 984 aa14.87□□□□□ -0.03
CCDC57-209ENST00000483145 CARD11Q9BXL7 1154 aa14.87□□□□□ -0.03
CCDC57-209ENST00000483145 DLC1Q96QB1 1528 aa14.87□□□□□ -0.03
CCDC57-209ENST00000483145 PTPRUQ92729 1446 aa14.86□□□□□ -0.03
CCDC57-209ENST00000483145 ABCC11Q96J66 1382 aa14.85□□□□□ -0.03
CCDC57-209ENST00000483145 C14orf37Q86TY3 774 aa14.85□□□□□ -0.03
CCDC57-209ENST00000483145 MED1Q15648 1581 aaPredicted RBP14.85□□□□□ -0.03
CCDC57-209ENST00000483145 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
CCDC57-209ENST00000483145 USP47Q96K76 1375 aa14.85□□□□□ -0.03
CCDC57-209ENST00000483145 PTCH1Q13635 1447 aa14.84□□□□□ -0.03
CCDC57-209ENST00000483145 PHF23Q9BUL5 403 aaPredicted RBP14.84□□□□□ -0.03
CCDC57-209ENST00000483145 FAM135BQ49AJ0 1406 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms