RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 SPATA31E1Q6ZUB1 1445 aa6.81□□□□□ -1.32
HDAC9-224ENST00000483142 ZMYM3Q14202 1370 aa6.81□□□□□ -1.32
HDAC9-224ENST00000483142 SLIT1O75093 1534 aa6.81□□□□□ -1.32
HDAC9-224ENST00000483142 MYOM2P54296 1465 aa6.8□□□□□ -1.32
HDAC9-224ENST00000483142 ARHGAP23Q9P227 1491 aa6.8□□□□□ -1.32
HDAC9-224ENST00000483142 PPLO60437 1756 aa6.8□□□□□ -1.32
HDAC9-224ENST00000483142 CAPN15O75808 1086 aa6.8□□□□□ -1.32
HDAC9-224ENST00000483142 NEXMIFQ5QGS0 1516 aa6.8□□□□□ -1.32
HDAC9-224ENST00000483142 TNRQ92752 1358 aa6.8□□□□□ -1.32
HDAC9-224ENST00000483142 WASHC2CQ9Y4E1 1318 aa6.79□□□□□ -1.32
HDAC9-224ENST00000483142 SETD1BQ9UPS6 1966 aaKnown RBP6.79□□□□□ -1.32
HDAC9-224ENST00000483142 CCDC144AA2RUR9 1427 aa6.79□□□□□ -1.32
HDAC9-224ENST00000483142 MYO5BQ9ULV0 1848 aa6.79□□□□□ -1.32
HDAC9-224ENST00000483142 GGT6Q6P531 493 aa6.79□□□□□ -1.32
HDAC9-224ENST00000483142 MPHOSPH9Q99550 1183 aa6.79□□□□□ -1.32
HDAC9-224ENST00000483142 LAMC1P11047 1609 aa6.79□□□□□ -1.32
HDAC9-224ENST00000483142 NRXN1Q9ULB1 1477 aa6.79□□□□□ -1.32
HDAC9-224ENST00000483142 SETD1AO15047 1707 aaKnown RBP6.78□□□□□ -1.32
HDAC9-224ENST00000483142 POLR1AO95602 1720 aaPredicted RBP6.78□□□□□ -1.32
HDAC9-224ENST00000483142 LMTK3Q96Q04 1460 aa6.78□□□□□ -1.32
HDAC9-224ENST00000483142 ARID4BQ4LE39 1312 aaPredicted RBP6.77□□□□□ -1.32
HDAC9-224ENST00000483142 ZFYVE9O95405 1425 aa6.77□□□□□ -1.33
HDAC9-224ENST00000483142 KIAA1210Q9ULL0 1709 aa6.77□□□□□ -1.33
HDAC9-224ENST00000483142 PKD2Q13563 968 aa6.77□□□□□ -1.33
HDAC9-224ENST00000483142 UHRF1BP1Q6BDS2 1440 aa6.76□□□□□ -1.33
HDAC9-224ENST00000483142 NRXN3Q9Y4C0 1643 aa6.76□□□□□ -1.33
HDAC9-224ENST00000483142 KDM4FA0A1W2PPD8 638 aa6.76□□□□□ -1.33
HDAC9-224ENST00000483142 TRIM52Q96A61 297 aa6.76□□□□□ -1.33
HDAC9-224ENST00000483142 DIP2AQ14689 1571 aa6.76□□□□□ -1.33
HDAC9-224ENST00000483142 SETBP1Q9Y6X0 1596 aa6.76□□□□□ -1.33
HDAC9-224ENST00000483142 PRAG1Q86YV5 1406 aa6.76□□□□□ -1.33
HDAC9-224ENST00000483142 ABCB7O75027 752 aa6.75□□□□□ -1.33
HDAC9-224ENST00000483142 DSG3P32926 999 aa6.74□□□□□ -1.33
HDAC9-224ENST00000483142 MLECQ14165 292 aa6.74□□□□□ -1.33
HDAC9-224ENST00000483142 SLC52A1Q9NWF4 448 aa6.74□□□□□ -1.33
HDAC9-224ENST00000483142 IQGAP1P46940 1657 aa6.74□□□□□ -1.33
HDAC9-224ENST00000483142 MED14O60244 1454 aa6.73□□□□□ -1.33
HDAC9-224ENST00000483142 KNDC1Q76NI1 1749 aa6.73□□□□□ -1.33
HDAC9-224ENST00000483142 TRPM1Q7Z4N2 1603 aa6.73□□□□□ -1.33
HDAC9-224ENST00000483142 ASXL1Q8IXJ9 1541 aa6.73□□□□□ -1.33
HDAC9-224ENST00000483142 SLC24A1O60721 1099 aa6.73□□□□□ -1.33
HDAC9-224ENST00000483142 ESF1Q9H501 851 aaKnown RBP6.73□□□□□ -1.33
HDAC9-224ENST00000483142 FBXO3Q9UK99 471 aa6.73□□□□□ -1.33
HDAC9-224ENST00000483142 CFAP65Q6ZU64 1925 aaKnown RBP6.73□□□□□ -1.33
HDAC9-224ENST00000483142 PIK3C2GO75747 1445 aa6.73□□□□□ -1.33
HDAC9-224ENST00000483142 NWD1Q149M9 1564 aa6.73□□□□□ -1.33
HDAC9-224ENST00000483142 SCAF11Q99590 1463 aaKnown RBP6.73□□□□□ -1.33
HDAC9-224ENST00000483142 ADGRB1O14514 1584 aa6.72□□□□□ -1.33
HDAC9-224ENST00000483142 RALGAPBQ86X10 1494 aa6.72□□□□□ -1.33
HDAC9-224ENST00000483142 TMEM2Q9UHN6 1383 aa6.71□□□□□ -1.33
HDAC9-224ENST00000483142 XRN1Q8IZH2 1706 aaKnown RBP6.71□□□□□ -1.34
HDAC9-224ENST00000483142 VASPP50552 380 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-224ENST00000483142 FBXO31Q5XUX0 539 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-224ENST00000483142 TIMELESSQ9UNS1 1208 aa6.71□□□□□ -1.34
HDAC9-224ENST00000483142 STRCQ7RTU9 1775 aa6.71□□□□□ -1.34
HDAC9-224ENST00000483142 RIMS2Q9UQ26 1411 aa6.7□□□□□ -1.34
HDAC9-224ENST00000483142 IDI1Q13907 227 aa6.7□□□□□ -1.34
HDAC9-224ENST00000483142 ZBTB12Q9Y330 459 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-224ENST00000483142 RPGRIP1LQ68CZ1 1315 aa6.7□□□□□ -1.34
HDAC9-224ENST00000483142 CPS1P31327 1500 aa6.7□□□□□ -1.34
HDAC9-224ENST00000483142 GPRASP1Q5JY77 1395 aa6.69□□□□□ -1.34
HDAC9-224ENST00000483142 PLEKHG1Q9ULL1 1385 aa6.69□□□□□ -1.34
HDAC9-224ENST00000483142 ADAMTS13Q76LX8 1427 aa6.69□□□□□ -1.34
HDAC9-224ENST00000483142 CEBPAP49715 358 aaPredicted RBP6.69□□□□□ -1.34
HDAC9-224ENST00000483142 IFNLR1Q8IU57 520 aaPredicted RBP6.69□□□□□ -1.34
HDAC9-224ENST00000483142 STAC3Q96MF2 364 aa6.69□□□□□ -1.34
HDAC9-224ENST00000483142 TECPR2O15040 1411 aa6.68□□□□□ -1.34
HDAC9-224ENST00000483142 DLC1Q96QB1 1528 aa6.68□□□□□ -1.34
HDAC9-224ENST00000483142 ALKQ9UM73 1620 aa6.68□□□□□ -1.34
HDAC9-224ENST00000483142 TONSLQ96HA7 1378 aa6.68□□□□□ -1.34
HDAC9-224ENST00000483142 ARHGEF28Q8N1W1 1705 aaKnown RBP6.67□□□□□ -1.34
HDAC9-224ENST00000483142 NPHP4O75161 1426 aaPredicted RBP6.67□□□□□ -1.34
HDAC9-224ENST00000483142 NKTRP30414 1462 aaKnown RBP6.66□□□□□ -1.34
HDAC9-224ENST00000483142 ADGRB2O60241 1585 aa6.66□□□□□ -1.34
HDAC9-224ENST00000483142 PIK3R4Q99570 1358 aa6.66□□□□□ -1.34
HDAC9-224ENST00000483142 PTCH1Q13635 1447 aa6.66□□□□□ -1.34
HDAC9-224ENST00000483142 CCER1Q8TC90 406 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-224ENST00000483142 SIN3AQ96ST3 1273 aa6.65□□□□□ -1.34
HDAC9-224ENST00000483142 SSUH2Q9Y2M2 353 aa6.65□□□□□ -1.34
HDAC9-224ENST00000483142 CHD2O14647 1828 aaKnown RBP6.64□□□□□ -1.35
HDAC9-224ENST00000483142 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.64□□□□□ -1.35
HDAC9-224ENST00000483142 STRCP1A6NGW2 1772 aa6.63□□□□□ -1.35
HDAC9-224ENST00000483142 THEMISQ8N1K5 641 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-224ENST00000483142 L3MBTL2Q969R5 705 aa6.63□□□□□ -1.35
HDAC9-224ENST00000483142 CDC42BPGQ6DT37 1551 aa6.62□□□□□ -1.35
HDAC9-224ENST00000483142 SBNO2Q9Y2G9 1366 aa6.62□□□□□ -1.35
HDAC9-224ENST00000483142 ADGRF5Q8IZF2 1346 aa6.62□□□□□ -1.35
HDAC9-224ENST00000483142 FAM135BQ49AJ0 1406 aa6.61□□□□□ -1.35
HDAC9-224ENST00000483142 PTPRUQ92729 1446 aa6.61□□□□□ -1.35
HDAC9-224ENST00000483142 LRPPRCP42704 1394 aaKnown RBP6.61□□□□□ -1.35
HDAC9-224ENST00000483142 VGFO15240 615 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-224ENST00000483142 LTKP29376 864 aa6.61□□□□□ -1.35
HDAC9-224ENST00000483142 NALCNQ8IZF0 1738 aa6.61□□□□□ -1.35
HDAC9-224ENST00000483142 QRICH2Q9H0J4 1663 aa6.61□□□□□ -1.35
HDAC9-224ENST00000483142 LTBP4Q8N2S1 1624 aa6.61□□□□□ -1.35
HDAC9-224ENST00000483142 YTHDC2Q9H6S0 1430 aaKnown RBP6.6□□□□□ -1.35
HDAC9-224ENST00000483142 PPP1R15AO75807 674 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-224ENST00000483142 ZEB1P37275 1124 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-224ENST00000483142 TOPAZ1Q8N9V7 1692 aa6.6□□□□□ -1.35
HDAC9-224ENST00000483142 IQSEC2Q5JU85 1478 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms