RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.99■■■□□ 2.39
CLIP2-205ENST00000482424 PLEKHG1Q9ULL1 1385 aa29.99■■■□□ 2.39
CLIP2-205ENST00000482424 ACIN1Q9UKV3 1341 aaKnown RBP29.98■■■□□ 2.39
CLIP2-205ENST00000482424 SETD5Q9C0A6 1442 aa29.98■■■□□ 2.39
CLIP2-205ENST00000482424 CLTCL1P53675 1640 aa29.97■■■□□ 2.39
CLIP2-205ENST00000482424 SLC26A8Q96RN1 970 aa29.95■■■□□ 2.39
CLIP2-205ENST00000482424 LRRC7Q96NW7 1537 aa29.94■■■□□ 2.38
CLIP2-205ENST00000482424 PPP1R15AO75807 674 aaPredicted RBP29.93■■■□□ 2.38
CLIP2-205ENST00000482424 MPHOSPH9Q99550 1183 aa29.91■■■□□ 2.38
CLIP2-205ENST00000482424 UBAP1LF5GYI3 381 aa29.9■■■□□ 2.38
CLIP2-205ENST00000482424 KCNA6P17658 529 aa29.89■■■□□ 2.38
CLIP2-205ENST00000482424 KIF1BO60333 1816 aa29.89■■■□□ 2.38
CLIP2-205ENST00000482424 BCANQ96GW7 911 aa29.88■■■□□ 2.37
CLIP2-205ENST00000482424 TBX22Q9Y458 520 aa29.88■■■□□ 2.37
CLIP2-205ENST00000482424 NUTM2DQ5VT03 806 aaPredicted RBP29.87■■■□□ 2.37
CLIP2-205ENST00000482424 RAB3GAP2Q9H2M9 1393 aa29.87■■■□□ 2.37
CLIP2-205ENST00000482424 ADAMTS13Q76LX8 1427 aa29.86■■■□□ 2.37
CLIP2-205ENST00000482424 FOXD1Q16676 465 aa29.85■■■□□ 2.37
CLIP2-205ENST00000482424 NWD1Q149M9 1564 aa29.84■■■□□ 2.37
CLIP2-205ENST00000482424 ZNF326Q5BKZ1 582 aaKnown RBP29.83■■■□□ 2.37
CLIP2-205ENST00000482424 TOM1O60784 492 aa29.82■■■□□ 2.36
CLIP2-205ENST00000482424 CHD2O14647 1828 aaKnown RBP29.82■■■□□ 2.36
CLIP2-205ENST00000482424 DIP2AQ14689 1571 aa29.81■■■□□ 2.36
CLIP2-205ENST00000482424 NEXMIFQ5QGS0 1516 aa29.81■■■□□ 2.36
CLIP2-205ENST00000482424 XIRP1Q702N8 1843 aaKnown RBP29.81■■■□□ 2.36
CLIP2-205ENST00000482424 SENP3Q9H4L4 574 aaPredicted RBP29.81■■■□□ 2.36
CLIP2-205ENST00000482424 ALKQ9UM73 1620 aa29.79■■■□□ 2.36
CLIP2-205ENST00000482424 HRCP23327 699 aa29.79■■■□□ 2.36
CLIP2-205ENST00000482424 NKTRP30414 1462 aaKnown RBP29.79■■■□□ 2.36
CLIP2-205ENST00000482424 PIK3R4Q99570 1358 aa29.77■■■□□ 2.36
CLIP2-205ENST00000482424 SETBP1Q9Y6X0 1596 aa29.77■■■□□ 2.36
CLIP2-205ENST00000482424 NRXN3Q9Y4C0 1643 aa29.76■■■□□ 2.35
CLIP2-205ENST00000482424 RPGRIP1LQ68CZ1 1315 aa29.74■■■□□ 2.35
CLIP2-205ENST00000482424 CCDC144AA2RUR9 1427 aa29.74■■■□□ 2.35
CLIP2-205ENST00000482424 TMEM94Q12767 1356 aa29.74■■■□□ 2.35
CLIP2-205ENST00000482424 PROSER2Q86WR7 435 aaPredicted RBP29.73■■■□□ 2.35
CLIP2-205ENST00000482424 VGFO15240 615 aaPredicted RBP29.69■■■□□ 2.34
CLIP2-205ENST00000482424 PIP4K2BP78356 416 aa29.68■■■□□ 2.34
CLIP2-205ENST00000482424 SPATA31E1Q6ZUB1 1445 aa29.68■■■□□ 2.34
CLIP2-205ENST00000482424 PPLO60437 1756 aa29.67■■■□□ 2.34
CLIP2-205ENST00000482424 PTPRUQ92729 1446 aa29.66■■■□□ 2.34
CLIP2-205ENST00000482424 RBM33Q96EV2 1170 aaKnown RBP29.65■■■□□ 2.34
CLIP2-205ENST00000482424 NCOA3Q9Y6Q9 1424 aa29.64■■■□□ 2.34
CLIP2-205ENST00000482424 AMOTL2Q9Y2J4 779 aa29.63■■■□□ 2.33
CLIP2-205ENST00000482424 SCAF1Q9H7N4 1312 aaKnown RBP29.63■■■□□ 2.33
CLIP2-205ENST00000482424 METP08581 1390 aa29.63■■■□□ 2.33
CLIP2-205ENST00000482424 XRN1Q8IZH2 1706 aaKnown RBP29.59■■■□□ 2.33
CLIP2-205ENST00000482424 RGL3Q3MIN7 710 aa29.58■■■□□ 2.33
CLIP2-205ENST00000482424 ANKRD30BQ9BXX2 1392 aa29.58■■■□□ 2.33
CLIP2-205ENST00000482424 SETD1AO15047 1707 aaKnown RBP29.57■■■□□ 2.32
CLIP2-205ENST00000482424 IFT172Q9UG01 1749 aa29.57■■■□□ 2.32
CLIP2-205ENST00000482424 MSH6P52701 1360 aa29.57■■■□□ 2.32
CLIP2-205ENST00000482424 HSPA1LP34931 641 aa29.56■■■□□ 2.32
CLIP2-205ENST00000482424 ADGRF5Q8IZF2 1346 aa29.53■■■□□ 2.32
CLIP2-205ENST00000482424 FAM135BQ49AJ0 1406 aa29.53■■■□□ 2.32
CLIP2-205ENST00000482424 C19orf44Q9H6X5 657 aa29.5■■■□□ 2.31
CLIP2-205ENST00000482424 PRAG1Q86YV5 1406 aa29.47■■■□□ 2.31
CLIP2-205ENST00000482424 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.47■■■□□ 2.31
CLIP2-205ENST00000482424 SLAIN2Q9P270 581 aa29.46■■■□□ 2.31
CLIP2-205ENST00000482424 PIK3C2GO75747 1445 aa29.45■■■□□ 2.3
CLIP2-205ENST00000482424 C14orf37Q86TY3 774 aa29.44■■■□□ 2.3
CLIP2-205ENST00000482424 CADPS2Q86UW7 1296 aa29.43■■■□□ 2.3
CLIP2-205ENST00000482424 PTCH1Q13635 1447 aa29.43■■■□□ 2.3
CLIP2-205ENST00000482424 ROBO1Q9Y6N7 1651 aa29.42■■■□□ 2.3
CLIP2-205ENST00000482424 MYOM2P54296 1465 aa29.42■■■□□ 2.3
CLIP2-205ENST00000482424 NRXN1Q9ULB1 1477 aa29.42■■■□□ 2.3
CLIP2-205ENST00000482424 DCCP43146 1447 aa29.41■■■□□ 2.3
CLIP2-205ENST00000482424 ATF3P18847 181 aa29.39■■■□□ 2.3
CLIP2-205ENST00000482424 ROBO2Q9HCK4 1378 aa29.38■■■□□ 2.29
CLIP2-205ENST00000482424 ADGRL3Q9HAR2 1447 aa29.36■■■□□ 2.29
CLIP2-205ENST00000482424 C14orf93Q9H972 538 aaKnown RBP29.35■■■□□ 2.29
CLIP2-205ENST00000482424 ASXL1Q8IXJ9 1541 aa29.35■■■□□ 2.29
CLIP2-205ENST00000482424 NALCNQ8IZF0 1738 aa29.33■■■□□ 2.29
CLIP2-205ENST00000482424 TECPR2O15040 1411 aa29.32■■■□□ 2.28
CLIP2-205ENST00000482424 LRPPRCP42704 1394 aaKnown RBP29.32■■■□□ 2.28
CLIP2-205ENST00000482424 STAC3Q96MF2 364 aa29.32■■■□□ 2.28
CLIP2-205ENST00000482424 ABCC11Q96J66 1382 aa29.31■■■□□ 2.28
CLIP2-205ENST00000482424 TMEM132EQ6IEE7 984 aa29.3■■■□□ 2.28
CLIP2-205ENST00000482424 LAMC1P11047 1609 aa29.3■■■□□ 2.28
CLIP2-205ENST00000482424 MST1RQ04912 1400 aa29.28■■■□□ 2.28
CLIP2-205ENST00000482424 DHX57Q6P158 1386 aaKnown RBP29.28■■■□□ 2.28
CLIP2-205ENST00000482424 DISP3Q9P2K9 1392 aa29.28■■■□□ 2.28
CLIP2-205ENST00000482424 CFAP70Q5T0N1 1121 aa29.28■■■□□ 2.28
CLIP2-205ENST00000482424 KNDC1Q76NI1 1749 aa29.28■■■□□ 2.28
CLIP2-205ENST00000482424 DCAF11Q8TEB1 546 aa29.27■■■□□ 2.28
CLIP2-205ENST00000482424 YTHDC2Q9H6S0 1430 aaKnown RBP29.26■■■□□ 2.27
CLIP2-205ENST00000482424 TRIM26Q12899 539 aaPredicted RBP29.24■■■□□ 2.27
CLIP2-205ENST00000482424 STK26Q9P289 416 aa29.24■■■□□ 2.27
CLIP2-205ENST00000482424 BRINP3Q76B58 766 aa29.23■■■□□ 2.27
CLIP2-205ENST00000482424 SIRT1Q96EB6 747 aa29.23■■■□□ 2.27
CLIP2-205ENST00000482424 PHLPP1O60346 1717 aa29.23■■■□□ 2.27
CLIP2-205ENST00000482424 MED1Q15648 1581 aaPredicted RBP29.22■■■□□ 2.27
CLIP2-205ENST00000482424 KDM2AQ9Y2K7 1162 aa29.22■■■□□ 2.27
CLIP2-205ENST00000482424 AHDC1Q5TGY3 1603 aaPredicted RBP29.21■■■□□ 2.27
CLIP2-205ENST00000482424 WAPLQ7Z5K2 1190 aa29.2■■■□□ 2.26
CLIP2-205ENST00000482424 COL16A1Q07092 1604 aaPredicted RBP29.18■■■□□ 2.26
CLIP2-205ENST00000482424 ADGRB1O14514 1584 aa29.18■■■□□ 2.26
CLIP2-205ENST00000482424 C1orf167Q5SNV9 1468 aa29.17■■■□□ 2.26
CLIP2-205ENST00000482424 PLEKHH1Q9ULM0 1364 aa29.16■■■□□ 2.26
CLIP2-205ENST00000482424 CDC42BPGQ6DT37 1551 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms