RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 TOM1O60784 492 aa31.19■■■□□ 2.58
TRA2A-206ENST00000482395 CHGAP10645 457 aaKnown RBP31.18■■■□□ 2.58
TRA2A-206ENST00000482395 TRPM2O94759 1503 aa31.17■■■□□ 2.58
TRA2A-206ENST00000482395 PPP1R15AO75807 674 aaPredicted RBP31.16■■■□□ 2.58
TRA2A-206ENST00000482395 NWD1Q149M9 1564 aa31.14■■■□□ 2.58
TRA2A-206ENST00000482395 XIRP1Q702N8 1843 aaKnown RBP31.14■■■□□ 2.58
TRA2A-206ENST00000482395 KIF1BO60333 1816 aa31.13■■■□□ 2.57
TRA2A-206ENST00000482395 TRIM52Q96A61 297 aa31.12■■■□□ 2.57
TRA2A-206ENST00000482395 KCNA6P17658 529 aa31.11■■■□□ 2.57
TRA2A-206ENST00000482395 CLTCL1P53675 1640 aa31.11■■■□□ 2.57
TRA2A-206ENST00000482395 DIP2AQ14689 1571 aa31.11■■■□□ 2.57
TRA2A-206ENST00000482395 BCANQ96GW7 911 aa31.11■■■□□ 2.57
TRA2A-206ENST00000482395 SLC26A8Q96RN1 970 aa31.11■■■□□ 2.57
TRA2A-206ENST00000482395 NKTRP30414 1462 aaKnown RBP31.1■■■□□ 2.57
TRA2A-206ENST00000482395 CHD2O14647 1828 aaKnown RBP31.1■■■□□ 2.57
TRA2A-206ENST00000482395 ACIN1Q9UKV3 1341 aaKnown RBP31.07■■■□□ 2.56
TRA2A-206ENST00000482395 ALKQ9UM73 1620 aa31.06■■■□□ 2.56
TRA2A-206ENST00000482395 SLC4A1APQ9BWU0 796 aaKnown RBP31.05■■■□□ 2.56
TRA2A-206ENST00000482395 TBX22Q9Y458 520 aa31.03■■■□□ 2.56
TRA2A-206ENST00000482395 SCAF1Q9H7N4 1312 aaKnown RBP31.02■■■□□ 2.56
TRA2A-206ENST00000482395 PIK3R4Q99570 1358 aa31.01■■■□□ 2.55
TRA2A-206ENST00000482395 ADAMTS13Q76LX8 1427 aa31■■■□□ 2.55
TRA2A-206ENST00000482395 PIP4K2BP78356 416 aa31■■■□□ 2.55
TRA2A-206ENST00000482395 TMEM94Q12767 1356 aa30.98■■■□□ 2.55
TRA2A-206ENST00000482395 ZNF326Q5BKZ1 582 aaKnown RBP30.98■■■□□ 2.55
TRA2A-206ENST00000482395 SETBP1Q9Y6X0 1596 aa30.97■■■□□ 2.55
TRA2A-206ENST00000482395 NEXMIFQ5QGS0 1516 aa30.96■■■□□ 2.55
TRA2A-206ENST00000482395 NUTM2DQ5VT03 806 aaPredicted RBP30.95■■■□□ 2.55
TRA2A-206ENST00000482395 PROSER2Q86WR7 435 aaPredicted RBP30.95■■■□□ 2.55
TRA2A-206ENST00000482395 NRXN3Q9Y4C0 1643 aa30.94■■■□□ 2.54
TRA2A-206ENST00000482395 SETD5Q9C0A6 1442 aa30.93■■■□□ 2.54
TRA2A-206ENST00000482395 SENP3Q9H4L4 574 aaPredicted RBP30.91■■■□□ 2.54
TRA2A-206ENST00000482395 NCOA3Q9Y6Q9 1424 aa30.9■■■□□ 2.54
TRA2A-206ENST00000482395 HSPA1LP34931 641 aa30.87■■■□□ 2.53
TRA2A-206ENST00000482395 MSH6P52701 1360 aa30.87■■■□□ 2.53
TRA2A-206ENST00000482395 MPHOSPH9Q99550 1183 aa30.86■■■□□ 2.53
TRA2A-206ENST00000482395 PPLO60437 1756 aa30.85■■■□□ 2.53
TRA2A-206ENST00000482395 RPGRIP1LQ68CZ1 1315 aa30.85■■■□□ 2.53
TRA2A-206ENST00000482395 CCDC144AA2RUR9 1427 aa30.84■■■□□ 2.53
TRA2A-206ENST00000482395 XRN1Q8IZH2 1706 aaKnown RBP30.84■■■□□ 2.53
TRA2A-206ENST00000482395 FAM135BQ49AJ0 1406 aa30.81■■■□□ 2.52
TRA2A-206ENST00000482395 DISP3Q9P2K9 1392 aa30.8■■■□□ 2.52
TRA2A-206ENST00000482395 VGFO15240 615 aaPredicted RBP30.8■■■□□ 2.52
TRA2A-206ENST00000482395 PTPRUQ92729 1446 aa30.79■■■□□ 2.52
TRA2A-206ENST00000482395 RAB3GAP2Q9H2M9 1393 aa30.79■■■□□ 2.52
TRA2A-206ENST00000482395 FOXD1Q16676 465 aa30.78■■■□□ 2.52
TRA2A-206ENST00000482395 AMOTL2Q9Y2J4 779 aa30.78■■■□□ 2.52
TRA2A-206ENST00000482395 RBM33Q96EV2 1170 aaKnown RBP30.77■■■□□ 2.52
TRA2A-206ENST00000482395 ROBO1Q9Y6N7 1651 aa30.77■■■□□ 2.52
TRA2A-206ENST00000482395 SETD1AO15047 1707 aaKnown RBP30.76■■■□□ 2.51
TRA2A-206ENST00000482395 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.74■■■□□ 2.51
TRA2A-206ENST00000482395 IFT172Q9UG01 1749 aa30.73■■■□□ 2.51
TRA2A-206ENST00000482395 SOCS7O14512 581 aa30.72■■■□□ 2.51
TRA2A-206ENST00000482395 METP08581 1390 aa30.71■■■□□ 2.51
TRA2A-206ENST00000482395 C14orf37Q86TY3 774 aa30.71■■■□□ 2.51
TRA2A-206ENST00000482395 SPATA31E1Q6ZUB1 1445 aa30.71■■■□□ 2.51
TRA2A-206ENST00000482395 MED1Q15648 1581 aaPredicted RBP30.68■■■□□ 2.5
TRA2A-206ENST00000482395 DCCP43146 1447 aa30.68■■■□□ 2.5
TRA2A-206ENST00000482395 HRCP23327 699 aa30.68■■■□□ 2.5
TRA2A-206ENST00000482395 C19orf44Q9H6X5 657 aa30.68■■■□□ 2.5
TRA2A-206ENST00000482395 CADPS2Q86UW7 1296 aa30.67■■■□□ 2.5
TRA2A-206ENST00000482395 ANKRD30BQ9BXX2 1392 aa30.66■■■□□ 2.5
TRA2A-206ENST00000482395 SLAIN2Q9P270 581 aa30.66■■■□□ 2.5
TRA2A-206ENST00000482395 PRAG1Q86YV5 1406 aa30.64■■■□□ 2.49
TRA2A-206ENST00000482395 PTCH1Q13635 1447 aa30.63■■■□□ 2.49
TRA2A-206ENST00000482395 ATF3P18847 181 aa30.62■■■□□ 2.49
TRA2A-206ENST00000482395 PHLPP1O60346 1717 aa30.6■■■□□ 2.49
TRA2A-206ENST00000482395 RGL3Q3MIN7 710 aa30.59■■■□□ 2.49
TRA2A-206ENST00000482395 ILDR2Q71H61 639 aa30.59■■■□□ 2.49
TRA2A-206ENST00000482395 ADGRL3Q9HAR2 1447 aa30.58■■■□□ 2.49
TRA2A-206ENST00000482395 NALCNQ8IZF0 1738 aa30.58■■■□□ 2.49
TRA2A-206ENST00000482395 ADGRF5Q8IZF2 1346 aa30.53■■■□□ 2.48
TRA2A-206ENST00000482395 PIK3C2GO75747 1445 aa30.53■■■□□ 2.48
TRA2A-206ENST00000482395 AHDC1Q5TGY3 1603 aaPredicted RBP30.52■■■□□ 2.48
TRA2A-206ENST00000482395 MYOM2P54296 1465 aa30.51■■■□□ 2.48
TRA2A-206ENST00000482395 LAMC1P11047 1609 aa30.51■■■□□ 2.47
TRA2A-206ENST00000482395 KNDC1Q76NI1 1749 aa30.5■■■□□ 2.47
TRA2A-206ENST00000482395 COL16A1Q07092 1604 aaPredicted RBP30.49■■■□□ 2.47
TRA2A-206ENST00000482395 MST1RQ04912 1400 aa30.48■■■□□ 2.47
TRA2A-206ENST00000482395 ROBO2Q9HCK4 1378 aa30.48■■■□□ 2.47
TRA2A-206ENST00000482395 NRXN1Q9ULB1 1477 aa30.47■■■□□ 2.47
TRA2A-206ENST00000482395 TECPR2O15040 1411 aa30.45■■■□□ 2.46
TRA2A-206ENST00000482395 JCADQ9P266 1359 aa30.43■■■□□ 2.46
TRA2A-206ENST00000482395 ASXL1Q8IXJ9 1541 aa30.43■■■□□ 2.46
TRA2A-206ENST00000482395 PHF23Q9BUL5 403 aaPredicted RBP30.43■■■□□ 2.46
TRA2A-206ENST00000482395 NHSL1Q5SYE7 1610 aa30.43■■■□□ 2.46
TRA2A-206ENST00000482395 BRINP3Q76B58 766 aa30.42■■■□□ 2.46
TRA2A-206ENST00000482395 LRPPRCP42704 1394 aaKnown RBP30.41■■■□□ 2.46
TRA2A-206ENST00000482395 SHPRHQ149N8 1683 aa30.39■■■□□ 2.45
TRA2A-206ENST00000482395 ABCC11Q96J66 1382 aa30.39■■■□□ 2.45
TRA2A-206ENST00000482395 CDC42BPGQ6DT37 1551 aa30.38■■■□□ 2.45
TRA2A-206ENST00000482395 STAC3Q96MF2 364 aa30.37■■■□□ 2.45
TRA2A-206ENST00000482395 C14orf93Q9H972 538 aaKnown RBP30.36■■■□□ 2.45
TRA2A-206ENST00000482395 YTHDC2Q9H6S0 1430 aaKnown RBP30.36■■■□□ 2.45
TRA2A-206ENST00000482395 C1orf167Q5SNV9 1468 aa30.34■■■□□ 2.45
TRA2A-206ENST00000482395 DHX57Q6P158 1386 aaKnown RBP30.31■■■□□ 2.44
TRA2A-206ENST00000482395 TMEM132EQ6IEE7 984 aa30.31■■■□□ 2.44
TRA2A-206ENST00000482395 SPATA31A6Q5VVP1 1343 aa30.3■■■□□ 2.44
TRA2A-206ENST00000482395 SIRT1Q96EB6 747 aa30.3■■■□□ 2.44
TRA2A-206ENST00000482395 STK26Q9P289 416 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms