RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ZFYVE9O95405 1425 aa20.51■□□□□ 0.87
CTDSP1-208ENST00000482272 HSPA1LP34931 641 aa20.49■□□□□ 0.87
CTDSP1-208ENST00000482272 BCANQ96GW7 911 aa20.49■□□□□ 0.87
CTDSP1-208ENST00000482272 NUP155O75694 1391 aa20.47■□□□□ 0.87
CTDSP1-208ENST00000482272 SLC26A8Q96RN1 970 aa20.46■□□□□ 0.87
CTDSP1-208ENST00000482272 SPHKAPQ2M3C7 1700 aa20.45■□□□□ 0.86
CTDSP1-208ENST00000482272 CHGAP10645 457 aaKnown RBP20.45■□□□□ 0.86
CTDSP1-208ENST00000482272 KCNA6P17658 529 aa20.45■□□□□ 0.86
CTDSP1-208ENST00000482272 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
CTDSP1-208ENST00000482272 NWD1Q149M9 1564 aa20.45■□□□□ 0.86
CTDSP1-208ENST00000482272 NAIPQ13075 1403 aa20.44■□□□□ 0.86
CTDSP1-208ENST00000482272 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
CTDSP1-208ENST00000482272 PPP1R15AO75807 674 aaPredicted RBP20.43■□□□□ 0.86
CTDSP1-208ENST00000482272 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.41■□□□□ 0.86
CTDSP1-208ENST00000482272 CHD2O14647 1828 aaKnown RBP20.4■□□□□ 0.86
CTDSP1-208ENST00000482272 PROSER2Q86WR7 435 aaPredicted RBP20.4■□□□□ 0.86
CTDSP1-208ENST00000482272 PLEKHG1Q9ULL1 1385 aa20.39■□□□□ 0.85
CTDSP1-208ENST00000482272 CLTCL1P53675 1640 aa20.38■□□□□ 0.85
CTDSP1-208ENST00000482272 NUTM2DQ5VT03 806 aaPredicted RBP20.37■□□□□ 0.85
CTDSP1-208ENST00000482272 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
CTDSP1-208ENST00000482272 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
CTDSP1-208ENST00000482272 TMEM94Q12767 1356 aa20.36■□□□□ 0.85
CTDSP1-208ENST00000482272 NRXN3Q9Y4C0 1643 aa20.35■□□□□ 0.85
CTDSP1-208ENST00000482272 TBX22Q9Y458 520 aa20.35■□□□□ 0.85
CTDSP1-208ENST00000482272 HFM1A2PYH4 1435 aa20.35■□□□□ 0.85
CTDSP1-208ENST00000482272 NKTRP30414 1462 aaKnown RBP20.34■□□□□ 0.85
CTDSP1-208ENST00000482272 MED1Q15648 1581 aaPredicted RBP20.34■□□□□ 0.85
CTDSP1-208ENST00000482272 TRPM2O94759 1503 aa20.32■□□□□ 0.84
CTDSP1-208ENST00000482272 DIP2AQ14689 1571 aa20.29■□□□□ 0.84
CTDSP1-208ENST00000482272 FAM135BQ49AJ0 1406 aa20.28■□□□□ 0.84
CTDSP1-208ENST00000482272 NEXMIFQ5QGS0 1516 aa20.28■□□□□ 0.84
CTDSP1-208ENST00000482272 ROBO1Q9Y6N7 1651 aa20.28■□□□□ 0.84
CTDSP1-208ENST00000482272 PTPRUQ92729 1446 aa20.27■□□□□ 0.84
CTDSP1-208ENST00000482272 MSH6P52701 1360 aa20.27■□□□□ 0.84
CTDSP1-208ENST00000482272 ZNF326Q5BKZ1 582 aaKnown RBP20.27■□□□□ 0.84
CTDSP1-208ENST00000482272 SETBP1Q9Y6X0 1596 aa20.26■□□□□ 0.83
CTDSP1-208ENST00000482272 TRIM52Q96A61 297 aa20.26■□□□□ 0.83
CTDSP1-208ENST00000482272 KIF1BO60333 1816 aa20.25■□□□□ 0.83
CTDSP1-208ENST00000482272 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
CTDSP1-208ENST00000482272 PIK3R4Q99570 1358 aa20.24■□□□□ 0.83
CTDSP1-208ENST00000482272 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
CTDSP1-208ENST00000482272 C14orf37Q86TY3 774 aa20.23■□□□□ 0.83
CTDSP1-208ENST00000482272 SLAIN2Q9P270 581 aa20.23■□□□□ 0.83
CTDSP1-208ENST00000482272 NCOA3Q9Y6Q9 1424 aa20.22■□□□□ 0.83
CTDSP1-208ENST00000482272 SETD1AO15047 1707 aaKnown RBP20.21■□□□□ 0.83
CTDSP1-208ENST00000482272 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.21■□□□□ 0.83
CTDSP1-208ENST00000482272 AMOTL2Q9Y2J4 779 aa20.2■□□□□ 0.82
CTDSP1-208ENST00000482272 FOXD1Q16676 465 aa20.18■□□□□ 0.82
CTDSP1-208ENST00000482272 SLC4A1APQ9BWU0 796 aaKnown RBP20.18■□□□□ 0.82
CTDSP1-208ENST00000482272 C19orf44Q9H6X5 657 aa20.18■□□□□ 0.82
CTDSP1-208ENST00000482272 METP08581 1390 aa20.18■□□□□ 0.82
CTDSP1-208ENST00000482272 PPLO60437 1756 aa20.16■□□□□ 0.82
CTDSP1-208ENST00000482272 ATF3P18847 181 aa20.16■□□□□ 0.82
CTDSP1-208ENST00000482272 CADPS2Q86UW7 1296 aa20.16■□□□□ 0.82
CTDSP1-208ENST00000482272 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
CTDSP1-208ENST00000482272 VGFO15240 615 aaPredicted RBP20.12■□□□□ 0.81
CTDSP1-208ENST00000482272 NALCNQ8IZF0 1738 aa20.12■□□□□ 0.81
CTDSP1-208ENST00000482272 COL16A1Q07092 1604 aaPredicted RBP20.12■□□□□ 0.81
CTDSP1-208ENST00000482272 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
CTDSP1-208ENST00000482272 RPGRIP1LQ68CZ1 1315 aa20.1■□□□□ 0.81
CTDSP1-208ENST00000482272 SPATA31E1Q6ZUB1 1445 aa20.06■□□□□ 0.8
CTDSP1-208ENST00000482272 ACIN1Q9UKV3 1341 aaKnown RBP20.05■□□□□ 0.8
CTDSP1-208ENST00000482272 MPHOSPH9Q99550 1183 aa20.05■□□□□ 0.8
CTDSP1-208ENST00000482272 RGS17Q9UGC6 210 aaPredicted RBP20.05■□□□□ 0.8
CTDSP1-208ENST00000482272 JCADQ9P266 1359 aa20.05■□□□□ 0.8
CTDSP1-208ENST00000482272 AHDC1Q5TGY3 1603 aaPredicted RBP20.05■□□□□ 0.8
CTDSP1-208ENST00000482272 SETD5Q9C0A6 1442 aa20.03■□□□□ 0.8
CTDSP1-208ENST00000482272 DCCP43146 1447 aa20.02■□□□□ 0.8
CTDSP1-208ENST00000482272 MST1RQ04912 1400 aa20.02■□□□□ 0.8
CTDSP1-208ENST00000482272 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.79
CTDSP1-208ENST00000482272 ROBO2Q9HCK4 1378 aa20.01■□□□□ 0.79
CTDSP1-208ENST00000482272 CCDC144AA2RUR9 1427 aa20.01■□□□□ 0.79
CTDSP1-208ENST00000482272 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
CTDSP1-208ENST00000482272 BRINP3Q76B58 766 aa20■□□□□ 0.79
CTDSP1-208ENST00000482272 NHSL1Q5SYE7 1610 aa20■□□□□ 0.79
CTDSP1-208ENST00000482272 ADGRF5Q8IZF2 1346 aa20■□□□□ 0.79
CTDSP1-208ENST00000482272 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
CTDSP1-208ENST00000482272 PTCH1Q13635 1447 aa19.99■□□□□ 0.79
CTDSP1-208ENST00000482272 PRAG1Q86YV5 1406 aa19.99■□□□□ 0.79
CTDSP1-208ENST00000482272 LRP6O75581 1613 aa19.98■□□□□ 0.79
CTDSP1-208ENST00000482272 SHPRHQ149N8 1683 aa19.98■□□□□ 0.79
CTDSP1-208ENST00000482272 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
CTDSP1-208ENST00000482272 SPATA31A6Q5VVP1 1343 aa19.98■□□□□ 0.79
CTDSP1-208ENST00000482272 POTEAQ6S8J7 498 aa19.94■□□□□ 0.78
CTDSP1-208ENST00000482272 MEX3CQ5U5Q3 659 aaKnown RBP19.93■□□□□ 0.78
CTDSP1-208ENST00000482272 PIK3C2GO75747 1445 aa19.93■□□□□ 0.78
CTDSP1-208ENST00000482272 DDX17Q92841 729 aaKnown RBP19.92■□□□□ 0.78
CTDSP1-208ENST00000482272 LRRC59Q96AG4 307 aaKnown RBP19.92■□□□□ 0.78
CTDSP1-208ENST00000482272 ANKRD30BQ9BXX2 1392 aa19.92■□□□□ 0.78
CTDSP1-208ENST00000482272 KNDC1Q76NI1 1749 aa19.91■□□□□ 0.78
CTDSP1-208ENST00000482272 LAMC1P11047 1609 aa19.91■□□□□ 0.78
CTDSP1-208ENST00000482272 C1orf167Q5SNV9 1468 aa19.9■□□□□ 0.78
CTDSP1-208ENST00000482272 NRXN1Q9ULB1 1477 aa19.89■□□□□ 0.77
CTDSP1-208ENST00000482272 TECPR2O15040 1411 aa19.87■□□□□ 0.77
CTDSP1-208ENST00000482272 NUTM2BA6NNL0 878 aaPredicted RBP19.87■□□□□ 0.77
CTDSP1-208ENST00000482272 NUTM2EB1AL46 878 aaPredicted RBP19.87■□□□□ 0.77
CTDSP1-208ENST00000482272 ZNF772Q68DY9 489 aaPredicted RBP19.87■□□□□ 0.77
CTDSP1-208ENST00000482272 NUTM2AQ8IVF1 878 aaPredicted RBP19.87■□□□□ 0.77
CTDSP1-208ENST00000482272 CDC42BPGQ6DT37 1551 aa19.87■□□□□ 0.77
CTDSP1-208ENST00000482272 PLEKHH1Q9ULM0 1364 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms