RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 MAGI2Q86UL8 1455 aa18.51■□□□□ 0.55
CCDC78-211ENST00000481804 SYCP2Q9BX26 1530 aa18.5■□□□□ 0.55
CCDC78-211ENST00000481804 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
CCDC78-211ENST00000481804 SAMD9LQ8IVG5 1584 aa18.5■□□□□ 0.55
CCDC78-211ENST00000481804 SPINK5Q9NQ38 1064 aaPredicted RBP18.49■□□□□ 0.55
CCDC78-211ENST00000481804 E9PSI1 815 aa18.49■□□□□ 0.55
CCDC78-211ENST00000481804 BECN1Q14457 450 aa18.49■□□□□ 0.55
CCDC78-211ENST00000481804 SLKQ9H2G2 1235 aaPredicted RBP18.49■□□□□ 0.55
CCDC78-211ENST00000481804 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
CCDC78-211ENST00000481804 EIF3AQ14152 1382 aaKnown RBP18.47■□□□□ 0.55
CCDC78-211ENST00000481804 NEUROD2Q15784 382 aa18.47■□□□□ 0.55
CCDC78-211ENST00000481804 COG6Q9Y2V7 657 aa18.47■□□□□ 0.55
CCDC78-211ENST00000481804 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.55
CCDC78-211ENST00000481804 IGHDP01880 384 aa18.46■□□□□ 0.55
CCDC78-211ENST00000481804 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
CCDC78-211ENST00000481804 CENPJQ9HC77 1338 aaPredicted RBP18.45■□□□□ 0.54
CCDC78-211ENST00000481804 UPF2Q9HAU5 1272 aaKnown RBP18.45■□□□□ 0.54
CCDC78-211ENST00000481804 CGNL1Q0VF96 1302 aa18.45■□□□□ 0.54
CCDC78-211ENST00000481804 LAMC1P11047 1609 aa18.45■□□□□ 0.54
CCDC78-211ENST00000481804 PANK1Q8TE04 598 aa18.45■□□□□ 0.54
CCDC78-211ENST00000481804 CHD1O14646 1710 aa18.44■□□□□ 0.54
CCDC78-211ENST00000481804 CLUAP1Q96AJ1 413 aa18.43■□□□□ 0.54
CCDC78-211ENST00000481804 MAPK8IP3Q9UPT6 1336 aa18.43■□□□□ 0.54
CCDC78-211ENST00000481804 ARXQ96QS3 562 aa18.43■□□□□ 0.54
CCDC78-211ENST00000481804 ASXL1Q8IXJ9 1541 aa18.42■□□□□ 0.54
CCDC78-211ENST00000481804 MYO5CQ9NQX4 1742 aa18.42■□□□□ 0.54
CCDC78-211ENST00000481804 PIK3C2GO75747 1445 aa18.41■□□□□ 0.54
CCDC78-211ENST00000481804 CDC42BPBQ9Y5S2 1711 aa18.41■□□□□ 0.54
CCDC78-211ENST00000481804 PREX2Q70Z35 1606 aa18.4■□□□□ 0.54
CCDC78-211ENST00000481804 TNNT2P45379 298 aaPredicted RBP18.4■□□□□ 0.54
CCDC78-211ENST00000481804 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
CCDC78-211ENST00000481804 UNC13BO14795 1591 aa18.4■□□□□ 0.54
CCDC78-211ENST00000481804 TRMT2AQ8IZ69 625 aaKnown RBP18.4■□□□□ 0.54
CCDC78-211ENST00000481804 PDE3AQ14432 1141 aa18.4■□□□□ 0.54
CCDC78-211ENST00000481804 SEC24BO95487 1268 aa18.39■□□□□ 0.53
CCDC78-211ENST00000481804 POGKQ9P215 609 aa18.39■□□□□ 0.53
CCDC78-211ENST00000481804 SCAF11Q99590 1463 aaKnown RBP18.38■□□□□ 0.53
CCDC78-211ENST00000481804 RRP7AQ9Y3A4 280 aaKnown RBP18.38■□□□□ 0.53
CCDC78-211ENST00000481804 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
CCDC78-211ENST00000481804 BCL2L13Q9BXK5 485 aa18.36■□□□□ 0.53
CCDC78-211ENST00000481804 EFCAB2Q5VUJ9 269 aa18.36■□□□□ 0.53
CCDC78-211ENST00000481804 DUOX2Q9NRD8 1548 aa18.35■□□□□ 0.53
CCDC78-211ENST00000481804 SPRYD3Q8NCJ5 442 aa18.35■□□□□ 0.53
CCDC78-211ENST00000481804 WWC1Q8IX03 1113 aa18.34■□□□□ 0.53
CCDC78-211ENST00000481804 PMFBP1Q8TBY8 1022 aa18.34■□□□□ 0.53
CCDC78-211ENST00000481804 NGEFQ8N5V2 710 aa18.34■□□□□ 0.53
CCDC78-211ENST00000481804 ATP10AO60312 1499 aa18.34■□□□□ 0.53
CCDC78-211ENST00000481804 USP19O94966 1318 aa18.34■□□□□ 0.53
CCDC78-211ENST00000481804 SYNMO15061 1565 aa18.34■□□□□ 0.53
CCDC78-211ENST00000481804 FAM43AQ8N2R8 423 aa18.33■□□□□ 0.53
CCDC78-211ENST00000481804 TTC37Q6PGP7 1564 aa18.33■□□□□ 0.53
CCDC78-211ENST00000481804 MAST1Q9Y2H9 1570 aa18.33■□□□□ 0.53
CCDC78-211ENST00000481804 CFAP70Q5T0N1 1121 aa18.33■□□□□ 0.52
CCDC78-211ENST00000481804 MORC1Q86VD1 984 aa18.32■□□□□ 0.52
CCDC78-211ENST00000481804 CLASP1Q7Z460 1538 aa18.32■□□□□ 0.52
CCDC78-211ENST00000481804 SPAG9O60271 1321 aaKnown RBP18.32■□□□□ 0.52
CCDC78-211ENST00000481804 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
CCDC78-211ENST00000481804 L1TD1Q5T7N2 865 aaKnown RBP18.31■□□□□ 0.52
CCDC78-211ENST00000481804 STAC3Q96MF2 364 aa18.31■□□□□ 0.52
CCDC78-211ENST00000481804 NINLQ9Y2I6 1382 aa18.31■□□□□ 0.52
CCDC78-211ENST00000481804 ABCC2Q92887 1545 aa18.31■□□□□ 0.52
CCDC78-211ENST00000481804 RNF17Q9BXT8 1623 aaKnown RBP18.3■□□□□ 0.52
CCDC78-211ENST00000481804 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
CCDC78-211ENST00000481804 CARD14Q9BXL6 1004 aa18.3■□□□□ 0.52
CCDC78-211ENST00000481804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.29■□□□□ 0.52
CCDC78-211ENST00000481804 PDZRN3Q9UPQ7 1066 aa18.29■□□□□ 0.52
CCDC78-211ENST00000481804 PLXNC1O60486 1568 aa18.28■□□□□ 0.52
CCDC78-211ENST00000481804 RSPH6AQ9H0K4 717 aa18.28■□□□□ 0.52
CCDC78-211ENST00000481804 RWDD1Q9H446 243 aaPredicted RBP18.28■□□□□ 0.52
CCDC78-211ENST00000481804 CHGAP10645 457 aaKnown RBP18.28■□□□□ 0.52
CCDC78-211ENST00000481804 RARSP54136 660 aaKnown RBP18.28■□□□□ 0.52
CCDC78-211ENST00000481804 AFAP1Q8N556 730 aa18.28■□□□□ 0.52
CCDC78-211ENST00000481804 MADDQ8WXG6 1647 aa18.28■□□□□ 0.52
CCDC78-211ENST00000481804 TCP11L2Q8N4U5 519 aa18.27■□□□□ 0.52
CCDC78-211ENST00000481804 GZF1Q9H116 711 aaPredicted RBP18.27■□□□□ 0.52
CCDC78-211ENST00000481804 TNNQ9UQP3 1299 aa18.27■□□□□ 0.52
CCDC78-211ENST00000481804 PCDHB15Q9Y5E8 787 aa18.27■□□□□ 0.52
CCDC78-211ENST00000481804 FTSJ3Q8IY81 847 aaKnown RBP18.27■□□□□ 0.51
CCDC78-211ENST00000481804 RUNDC1Q96C34 613 aa18.26■□□□□ 0.51
CCDC78-211ENST00000481804 RLBP1P12271 317 aa18.25■□□□□ 0.51
CCDC78-211ENST00000481804 KANK1Q14678 1352 aa18.25■□□□□ 0.51
CCDC78-211ENST00000481804 SCAPERQ9BY12 1400 aa18.25■□□□□ 0.51
CCDC78-211ENST00000481804 IQGAP1P46940 1657 aa18.25■□□□□ 0.51
CCDC78-211ENST00000481804 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
CCDC78-211ENST00000481804 KIF3BO15066 747 aa18.24■□□□□ 0.51
CCDC78-211ENST00000481804 TBC1D32Q96NH3 1257 aa18.24■□□□□ 0.51
CCDC78-211ENST00000481804 MFAP1P55081 439 aaKnown RBP18.23■□□□□ 0.51
CCDC78-211ENST00000481804 CFAP53Q96M91 514 aa18.23■□□□□ 0.51
CCDC78-211ENST00000481804 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
CCDC78-211ENST00000481804 KDM5AP29375 1690 aaKnown RBP18.22■□□□□ 0.51
CCDC78-211ENST00000481804 ADGRF5Q8IZF2 1346 aa18.22■□□□□ 0.51
CCDC78-211ENST00000481804 GOLGA6L3A6NEY3 463 aa18.22■□□□□ 0.51
CCDC78-211ENST00000481804 AAMPQ13685 434 aa18.22■□□□□ 0.51
CCDC78-211ENST00000481804 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.51
CCDC78-211ENST00000481804 POLR3AO14802 1390 aaPredicted RBP18.21■□□□□ 0.5
CCDC78-211ENST00000481804 MYH16Q9H6N6 1097 aa18.2■□□□□ 0.5
CCDC78-211ENST00000481804 SLC12A5Q9H2X9 1139 aa18.2■□□□□ 0.5
CCDC78-211ENST00000481804 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
CCDC78-211ENST00000481804 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.5
CCDC78-211ENST00000481804 ANTXR1Q9H6X2 564 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms