RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 SLC26A8Q96RN1 970 aa33.75■■■□□ 2.99
GPCPD1-206ENST00000481690 SENP3Q9H4L4 574 aaPredicted RBP33.74■■■□□ 2.99
GPCPD1-206ENST00000481690 RIMS2Q9UQ26 1411 aa33.73■■■□□ 2.99
GPCPD1-206ENST00000481690 ZFYVE9O95405 1425 aa33.72■■■□□ 2.99
GPCPD1-206ENST00000481690 PPP1R15AO75807 674 aaPredicted RBP33.71■■■□□ 2.99
GPCPD1-206ENST00000481690 HSPA1LP34931 641 aa33.71■■■□□ 2.99
GPCPD1-206ENST00000481690 SPHKAPQ2M3C7 1700 aa33.7■■■□□ 2.98
GPCPD1-206ENST00000481690 KCNA6P17658 529 aa33.66■■■□□ 2.98
GPCPD1-206ENST00000481690 HDGFP51858 240 aaKnown RBP33.66■■■□□ 2.98
GPCPD1-206ENST00000481690 PLEKHG1Q9ULL1 1385 aa33.66■■■□□ 2.98
GPCPD1-206ENST00000481690 NWD1Q149M9 1564 aa33.64■■■□□ 2.98
GPCPD1-206ENST00000481690 NAIPQ13075 1403 aa33.64■■■□□ 2.98
GPCPD1-206ENST00000481690 TMEM94Q12767 1356 aa33.6■■■□□ 2.97
GPCPD1-206ENST00000481690 NUTM2DQ5VT03 806 aaPredicted RBP33.6■■■□□ 2.97
GPCPD1-206ENST00000481690 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.6■■■□□ 2.97
GPCPD1-206ENST00000481690 NKTRP30414 1462 aaKnown RBP33.59■■■□□ 2.97
GPCPD1-206ENST00000481690 CHD2O14647 1828 aaKnown RBP33.59■■■□□ 2.97
GPCPD1-206ENST00000481690 PROSER2Q86WR7 435 aaPredicted RBP33.58■■■□□ 2.97
GPCPD1-206ENST00000481690 RBM33Q96EV2 1170 aaKnown RBP33.56■■■□□ 2.96
GPCPD1-206ENST00000481690 ILDR2Q71H61 639 aa33.55■■■□□ 2.96
GPCPD1-206ENST00000481690 HFM1A2PYH4 1435 aa33.53■■■□□ 2.96
GPCPD1-206ENST00000481690 DIP2AQ14689 1571 aa33.51■■■□□ 2.96
GPCPD1-206ENST00000481690 MED1Q15648 1581 aaPredicted RBP33.51■■■□□ 2.96
GPCPD1-206ENST00000481690 CLTCL1P53675 1640 aa33.5■■■□□ 2.95
GPCPD1-206ENST00000481690 ADAMTS13Q76LX8 1427 aa33.49■■■□□ 2.95
GPCPD1-206ENST00000481690 TRIM52Q96A61 297 aa33.49■■■□□ 2.95
GPCPD1-206ENST00000481690 TRPM2O94759 1503 aa33.48■■■□□ 2.95
GPCPD1-206ENST00000481690 TBX22Q9Y458 520 aa33.48■■■□□ 2.95
GPCPD1-206ENST00000481690 KIF1BO60333 1816 aa33.47■■■□□ 2.95
GPCPD1-206ENST00000481690 ZNF326Q5BKZ1 582 aaKnown RBP33.46■■■□□ 2.95
GPCPD1-206ENST00000481690 MSH6P52701 1360 aa33.44■■■□□ 2.94
GPCPD1-206ENST00000481690 ROBO1Q9Y6N7 1651 aa33.42■■■□□ 2.94
GPCPD1-206ENST00000481690 NRXN3Q9Y4C0 1643 aa33.39■■■□□ 2.94
GPCPD1-206ENST00000481690 FAM135BQ49AJ0 1406 aa33.38■■■□□ 2.93
GPCPD1-206ENST00000481690 PIK3R4Q99570 1358 aa33.37■■■□□ 2.93
GPCPD1-206ENST00000481690 SETBP1Q9Y6X0 1596 aa33.36■■■□□ 2.93
GPCPD1-206ENST00000481690 SLC4A1APQ9BWU0 796 aaKnown RBP33.36■■■□□ 2.93
GPCPD1-206ENST00000481690 NEXMIFQ5QGS0 1516 aa33.35■■■□□ 2.93
GPCPD1-206ENST00000481690 C14orf37Q86TY3 774 aa33.34■■■□□ 2.93
GPCPD1-206ENST00000481690 PTPRUQ92729 1446 aa33.3■■■□□ 2.92
GPCPD1-206ENST00000481690 NCOA3Q9Y6Q9 1424 aa33.29■■■□□ 2.92
GPCPD1-206ENST00000481690 AMOTL2Q9Y2J4 779 aa33.29■■■□□ 2.92
GPCPD1-206ENST00000481690 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.28■■■□□ 2.92
GPCPD1-206ENST00000481690 PHF23Q9BUL5 403 aaPredicted RBP33.28■■■□□ 2.92
GPCPD1-206ENST00000481690 XRN1Q8IZH2 1706 aaKnown RBP33.28■■■□□ 2.92
GPCPD1-206ENST00000481690 SOCS7O14512 581 aa33.27■■■□□ 2.92
GPCPD1-206ENST00000481690 SLAIN2Q9P270 581 aa33.26■■■□□ 2.91
GPCPD1-206ENST00000481690 PHLPP1O60346 1717 aa33.24■■■□□ 2.91
GPCPD1-206ENST00000481690 FOXD1Q16676 465 aa33.22■■■□□ 2.91
GPCPD1-206ENST00000481690 METP08581 1390 aa33.21■■■□□ 2.91
GPCPD1-206ENST00000481690 PPLO60437 1756 aa33.19■■■□□ 2.9
GPCPD1-206ENST00000481690 C19orf44Q9H6X5 657 aa33.18■■■□□ 2.9
GPCPD1-206ENST00000481690 ATF3P18847 181 aa33.17■■■□□ 2.9
GPCPD1-206ENST00000481690 CADPS2Q86UW7 1296 aa33.17■■■□□ 2.9
GPCPD1-206ENST00000481690 SETD1AO15047 1707 aaKnown RBP33.14■■■□□ 2.89
GPCPD1-206ENST00000481690 VGFO15240 615 aaPredicted RBP33.13■■■□□ 2.89
GPCPD1-206ENST00000481690 MPHOSPH9Q99550 1183 aa33.12■■■□□ 2.89
GPCPD1-206ENST00000481690 CCDC144AA2RUR9 1427 aa33.11■■■□□ 2.89
GPCPD1-206ENST00000481690 RPGRIP1LQ68CZ1 1315 aa33.11■■■□□ 2.89
GPCPD1-206ENST00000481690 COL16A1Q07092 1604 aaPredicted RBP33.09■■■□□ 2.89
GPCPD1-206ENST00000481690 DCCP43146 1447 aa33.08■■■□□ 2.89
GPCPD1-206ENST00000481690 SETD5Q9C0A6 1442 aa33.07■■■□□ 2.88
GPCPD1-206ENST00000481690 NALCNQ8IZF0 1738 aa33.07■■■□□ 2.88
GPCPD1-206ENST00000481690 AHDC1Q5TGY3 1603 aaPredicted RBP33.03■■■□□ 2.88
GPCPD1-206ENST00000481690 ADGRL3Q9HAR2 1447 aa33.02■■■□□ 2.88
GPCPD1-206ENST00000481690 JCADQ9P266 1359 aa33.02■■■□□ 2.88
GPCPD1-206ENST00000481690 IFT172Q9UG01 1749 aa33.02■■■□□ 2.88
GPCPD1-206ENST00000481690 RGL3Q3MIN7 710 aa33.01■■■□□ 2.87
GPCPD1-206ENST00000481690 MST1RQ04912 1400 aa32.99■■■□□ 2.87
GPCPD1-206ENST00000481690 ACIN1Q9UKV3 1341 aaKnown RBP32.99■■■□□ 2.87
GPCPD1-206ENST00000481690 PTCH1Q13635 1447 aa32.98■■■□□ 2.87
GPCPD1-206ENST00000481690 SPATA31E1Q6ZUB1 1445 aa32.98■■■□□ 2.87
GPCPD1-206ENST00000481690 BRINP3Q76B58 766 aa32.98■■■□□ 2.87
GPCPD1-206ENST00000481690 ASXL1Q8IXJ9 1541 aa32.97■■■□□ 2.87
GPCPD1-206ENST00000481690 RAB3GAP2Q9H2M9 1393 aa32.96■■■□□ 2.87
GPCPD1-206ENST00000481690 RGS17Q9UGC6 210 aaPredicted RBP32.95■■■□□ 2.87
GPCPD1-206ENST00000481690 ADGRF5Q8IZF2 1346 aa32.94■■■□□ 2.86
GPCPD1-206ENST00000481690 ROBO2Q9HCK4 1378 aa32.94■■■□□ 2.86
GPCPD1-206ENST00000481690 SHPRHQ149N8 1683 aa32.92■■■□□ 2.86
GPCPD1-206ENST00000481690 NHSL1Q5SYE7 1610 aa32.91■■■□□ 2.86
GPCPD1-206ENST00000481690 ANKRD30BQ9BXX2 1392 aa32.91■■■□□ 2.86
GPCPD1-206ENST00000481690 PRAG1Q86YV5 1406 aa32.89■■■□□ 2.86
GPCPD1-206ENST00000481690 SPATA31A6Q5VVP1 1343 aa32.85■■■□□ 2.85
GPCPD1-206ENST00000481690 LRP6O75581 1613 aa32.84■■■□□ 2.85
GPCPD1-206ENST00000481690 C1orf167Q5SNV9 1468 aa32.82■■■□□ 2.84
GPCPD1-206ENST00000481690 PIK3C2GO75747 1445 aa32.82■■■□□ 2.84
GPCPD1-206ENST00000481690 MEX3CQ5U5Q3 659 aaKnown RBP32.81■■■□□ 2.84
GPCPD1-206ENST00000481690 POTEAQ6S8J7 498 aa32.8■■■□□ 2.84
GPCPD1-206ENST00000481690 STK26Q9P289 416 aa32.8■■■□□ 2.84
GPCPD1-206ENST00000481690 KNDC1Q76NI1 1749 aa32.8■■■□□ 2.84
GPCPD1-206ENST00000481690 DDX17Q92841 729 aaKnown RBP32.79■■■□□ 2.84
GPCPD1-206ENST00000481690 CDC42BPGQ6DT37 1551 aa32.75■■■□□ 2.83
GPCPD1-206ENST00000481690 LRPPRCP42704 1394 aaKnown RBP32.75■■■□□ 2.83
GPCPD1-206ENST00000481690 TMEM132EQ6IEE7 984 aa32.75■■■□□ 2.83
GPCPD1-206ENST00000481690 NUTM2BA6NNL0 878 aaPredicted RBP32.74■■■□□ 2.83
GPCPD1-206ENST00000481690 NUTM2EB1AL46 878 aaPredicted RBP32.74■■■□□ 2.83
GPCPD1-206ENST00000481690 NUTM2AQ8IVF1 878 aaPredicted RBP32.74■■■□□ 2.83
GPCPD1-206ENST00000481690 TECPR2O15040 1411 aa32.74■■■□□ 2.83
GPCPD1-206ENST00000481690 MYOM2P54296 1465 aa32.74■■■□□ 2.83
GPCPD1-206ENST00000481690 LAMC1P11047 1609 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms