RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
RAPGEF1-207ENST00000481260 SETD5Q9C0A6 1442 aa17.11■□□□□ 0.33
RAPGEF1-207ENST00000481260 TRPM2O94759 1503 aa17.11■□□□□ 0.33
RAPGEF1-207ENST00000481260 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
RAPGEF1-207ENST00000481260 LRRC7Q96NW7 1537 aa17.1■□□□□ 0.33
RAPGEF1-207ENST00000481260 RAB3GAP2Q9H2M9 1393 aa17.09■□□□□ 0.33
RAPGEF1-207ENST00000481260 CPS1P31327 1500 aa17.09■□□□□ 0.33
RAPGEF1-207ENST00000481260 IQSEC2Q5JU85 1478 aa17.08■□□□□ 0.32
RAPGEF1-207ENST00000481260 UBAP1LF5GYI3 381 aa17.08■□□□□ 0.32
RAPGEF1-207ENST00000481260 BCANQ96GW7 911 aa17.08■□□□□ 0.32
RAPGEF1-207ENST00000481260 MPHOSPH9Q99550 1183 aa17.08■□□□□ 0.32
RAPGEF1-207ENST00000481260 ALKQ9UM73 1620 aa17.07■□□□□ 0.32
RAPGEF1-207ENST00000481260 PLEKHG1Q9ULL1 1385 aa17.07■□□□□ 0.32
RAPGEF1-207ENST00000481260 PPP1R15AO75807 674 aaPredicted RBP17.07■□□□□ 0.32
RAPGEF1-207ENST00000481260 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
RAPGEF1-207ENST00000481260 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
RAPGEF1-207ENST00000481260 NEXMIFQ5QGS0 1516 aa17.02■□□□□ 0.32
RAPGEF1-207ENST00000481260 PIP4K2BP78356 416 aa17.02■□□□□ 0.32
RAPGEF1-207ENST00000481260 ILDR2Q71H61 639 aa17.02■□□□□ 0.32
RAPGEF1-207ENST00000481260 XIRP1Q702N8 1843 aaKnown RBP17.01■□□□□ 0.31
RAPGEF1-207ENST00000481260 NRXN3Q9Y4C0 1643 aa17.01■□□□□ 0.31
RAPGEF1-207ENST00000481260 KCNA6P17658 529 aa17.01■□□□□ 0.31
RAPGEF1-207ENST00000481260 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
RAPGEF1-207ENST00000481260 PTPRUQ92729 1446 aa17■□□□□ 0.31
RAPGEF1-207ENST00000481260 TMEM94Q12767 1356 aa17■□□□□ 0.31
RAPGEF1-207ENST00000481260 NWD1Q149M9 1564 aa16.99■□□□□ 0.31
RAPGEF1-207ENST00000481260 DISP3Q9P2K9 1392 aa16.99■□□□□ 0.31
RAPGEF1-207ENST00000481260 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
RAPGEF1-207ENST00000481260 TBX22Q9Y458 520 aa16.98■□□□□ 0.31
RAPGEF1-207ENST00000481260 HDGFP51858 240 aaKnown RBP16.97■□□□□ 0.31
RAPGEF1-207ENST00000481260 PROSER2Q86WR7 435 aaPredicted RBP16.97■□□□□ 0.31
RAPGEF1-207ENST00000481260 METP08581 1390 aa16.97■□□□□ 0.31
RAPGEF1-207ENST00000481260 KIF1BO60333 1816 aa16.96■□□□□ 0.31
RAPGEF1-207ENST00000481260 SPATA31E1Q6ZUB1 1445 aa16.96■□□□□ 0.3
RAPGEF1-207ENST00000481260 SETBP1Q9Y6X0 1596 aa16.95■□□□□ 0.3
RAPGEF1-207ENST00000481260 RGL3Q3MIN7 710 aa16.95■□□□□ 0.3
RAPGEF1-207ENST00000481260 CHD2O14647 1828 aaKnown RBP16.94■□□□□ 0.3
RAPGEF1-207ENST00000481260 HSPA1LP34931 641 aa16.94■□□□□ 0.3
RAPGEF1-207ENST00000481260 CCDC144AA2RUR9 1427 aa16.94■□□□□ 0.3
RAPGEF1-207ENST00000481260 TOM1O60784 492 aa16.93■□□□□ 0.3
RAPGEF1-207ENST00000481260 NKTRP30414 1462 aaKnown RBP16.93■□□□□ 0.3
RAPGEF1-207ENST00000481260 AMOTL2Q9Y2J4 779 aa16.92■□□□□ 0.3
RAPGEF1-207ENST00000481260 ADGRF5Q8IZF2 1346 aa16.92■□□□□ 0.3
RAPGEF1-207ENST00000481260 DIP2AQ14689 1571 aa16.91■□□□□ 0.3
RAPGEF1-207ENST00000481260 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.3
RAPGEF1-207ENST00000481260 PPLO60437 1756 aa16.89■□□□□ 0.3
RAPGEF1-207ENST00000481260 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
RAPGEF1-207ENST00000481260 XRN1Q8IZH2 1706 aaKnown RBP16.87■□□□□ 0.29
RAPGEF1-207ENST00000481260 SOCS7O14512 581 aa16.87■□□□□ 0.29
RAPGEF1-207ENST00000481260 RPGRIP1LQ68CZ1 1315 aa16.87■□□□□ 0.29
RAPGEF1-207ENST00000481260 PIK3R4Q99570 1358 aa16.87■□□□□ 0.29
RAPGEF1-207ENST00000481260 VGFO15240 615 aaPredicted RBP16.85■□□□□ 0.29
RAPGEF1-207ENST00000481260 IFT172Q9UG01 1749 aa16.84■□□□□ 0.29
RAPGEF1-207ENST00000481260 HRCP23327 699 aa16.84■□□□□ 0.29
RAPGEF1-207ENST00000481260 ASXL1Q8IXJ9 1541 aa16.82■□□□□ 0.28
RAPGEF1-207ENST00000481260 MSH6P52701 1360 aa16.82■□□□□ 0.28
RAPGEF1-207ENST00000481260 ROBO2Q9HCK4 1378 aa16.82■□□□□ 0.28
RAPGEF1-207ENST00000481260 C14orf37Q86TY3 774 aa16.82■□□□□ 0.28
RAPGEF1-207ENST00000481260 TMEM132EQ6IEE7 984 aa16.81■□□□□ 0.28
RAPGEF1-207ENST00000481260 PIK3C2GO75747 1445 aa16.79■□□□□ 0.28
RAPGEF1-207ENST00000481260 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
RAPGEF1-207ENST00000481260 ACIN1Q9UKV3 1341 aaKnown RBP16.79■□□□□ 0.28
RAPGEF1-207ENST00000481260 SLAIN2Q9P270 581 aa16.79■□□□□ 0.28
RAPGEF1-207ENST00000481260 ROBO1Q9Y6N7 1651 aa16.78■□□□□ 0.28
RAPGEF1-207ENST00000481260 STK26Q9P289 416 aa16.78■□□□□ 0.28
RAPGEF1-207ENST00000481260 FAM135BQ49AJ0 1406 aa16.78■□□□□ 0.28
RAPGEF1-207ENST00000481260 CFAP70Q5T0N1 1121 aa16.77■□□□□ 0.28
RAPGEF1-207ENST00000481260 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.27
RAPGEF1-207ENST00000481260 NRXN1Q9ULB1 1477 aa16.76■□□□□ 0.27
RAPGEF1-207ENST00000481260 C19orf44Q9H6X5 657 aa16.76■□□□□ 0.27
RAPGEF1-207ENST00000481260 NCOA3Q9Y6Q9 1424 aa16.76■□□□□ 0.27
RAPGEF1-207ENST00000481260 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
RAPGEF1-207ENST00000481260 PLEKHH1Q9ULM0 1364 aa16.76■□□□□ 0.27
RAPGEF1-207ENST00000481260 KDM2AQ9Y2K7 1162 aa16.75■□□□□ 0.27
RAPGEF1-207ENST00000481260 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
RAPGEF1-207ENST00000481260 WAPLQ7Z5K2 1190 aa16.74■□□□□ 0.27
RAPGEF1-207ENST00000481260 MYOM2P54296 1465 aa16.73■□□□□ 0.27
RAPGEF1-207ENST00000481260 ADGRL3Q9HAR2 1447 aa16.73■□□□□ 0.27
RAPGEF1-207ENST00000481260 ATF3P18847 181 aa16.73■□□□□ 0.27
RAPGEF1-207ENST00000481260 C14orf93Q9H972 538 aaKnown RBP16.73■□□□□ 0.27
RAPGEF1-207ENST00000481260 MST1RQ04912 1400 aa16.72■□□□□ 0.27
RAPGEF1-207ENST00000481260 DCAF11Q8TEB1 546 aa16.72■□□□□ 0.27
RAPGEF1-207ENST00000481260 PRAG1Q86YV5 1406 aa16.71■□□□□ 0.27
RAPGEF1-207ENST00000481260 CADPS2Q86UW7 1296 aa16.71■□□□□ 0.27
RAPGEF1-207ENST00000481260 DDX17Q92841 729 aaKnown RBP16.71■□□□□ 0.27
RAPGEF1-207ENST00000481260 SIN3AQ96ST3 1273 aa16.71■□□□□ 0.27
RAPGEF1-207ENST00000481260 LRPPRCP42704 1394 aaKnown RBP16.71■□□□□ 0.27
RAPGEF1-207ENST00000481260 BRINP3Q76B58 766 aa16.7■□□□□ 0.26
RAPGEF1-207ENST00000481260 YTHDC2Q9H6S0 1430 aaKnown RBP16.7■□□□□ 0.26
RAPGEF1-207ENST00000481260 MED1Q15648 1581 aaPredicted RBP16.69■□□□□ 0.26
RAPGEF1-207ENST00000481260 TECPR2O15040 1411 aa16.68■□□□□ 0.26
RAPGEF1-207ENST00000481260 DCCP43146 1447 aa16.68■□□□□ 0.26
RAPGEF1-207ENST00000481260 ABCC11Q96J66 1382 aa16.67■□□□□ 0.26
RAPGEF1-207ENST00000481260 TRIM26Q12899 539 aaPredicted RBP16.67■□□□□ 0.26
RAPGEF1-207ENST00000481260 ADGRB1O14514 1584 aa16.66■□□□□ 0.26
RAPGEF1-207ENST00000481260 COL16A1Q07092 1604 aaPredicted RBP16.66■□□□□ 0.26
RAPGEF1-207ENST00000481260 PHLPP1O60346 1717 aa16.65■□□□□ 0.26
RAPGEF1-207ENST00000481260 SAFB2Q14151 953 aaKnown RBP eCLIP16.65■□□□□ 0.26
RAPGEF1-207ENST00000481260 ORAI2Q96SN7 254 aa16.65■□□□□ 0.26
RAPGEF1-207ENST00000481260 C1orf167Q5SNV9 1468 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms