RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 DNMBPQ6XZF7 1577 aa11.73□□□□□ -0.53
GARNL3-216ENST00000481242 HMGB2P26583 209 aaKnown RBP11.73□□□□□ -0.53
GARNL3-216ENST00000481242 GNAI1P63096 354 aa11.73□□□□□ -0.53
GARNL3-216ENST00000481242 WWC1Q8IX03 1113 aa11.73□□□□□ -0.53
GARNL3-216ENST00000481242 KIAA0586Q9BVV6 1533 aa11.73□□□□□ -0.53
GARNL3-216ENST00000481242 NESP48681 1621 aa11.73□□□□□ -0.53
GARNL3-216ENST00000481242 AAMPQ13685 434 aa11.72□□□□□ -0.53
GARNL3-216ENST00000481242 ZBED9Q6R2W3 1325 aa11.72□□□□□ -0.53
GARNL3-216ENST00000481242 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
GARNL3-216ENST00000481242 RPGRIP1LQ68CZ1 1315 aa11.72□□□□□ -0.53
GARNL3-216ENST00000481242 HSP90B1P14625 803 aaKnown RBP11.72□□□□□ -0.53
GARNL3-216ENST00000481242 C9orf78Q9NZ63 289 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-216ENST00000481242 HSP90AA2PQ14568 343 aaPredicted RBP11.71□□□□□ -0.53
GARNL3-216ENST00000481242 RUNDC1Q96C34 613 aa11.71□□□□□ -0.53
GARNL3-216ENST00000481242 NOL10Q9BSC4 688 aaKnown RBP11.71□□□□□ -0.53
GARNL3-216ENST00000481242 EHBP1L1Q8N3D4 1523 aa11.71□□□□□ -0.53
GARNL3-216ENST00000481242 ST18O60284 1047 aa11.71□□□□□ -0.53
GARNL3-216ENST00000481242 AMOTL1Q8IY63 956 aa11.71□□□□□ -0.53
GARNL3-216ENST00000481242 SNAPC4Q5SXM2 1469 aa11.71□□□□□ -0.53
GARNL3-216ENST00000481242 HSP90AB4PQ58FF6 505 aa11.71□□□□□ -0.54
GARNL3-216ENST00000481242 PROSER2Q86WR7 435 aaPredicted RBP11.71□□□□□ -0.54
GARNL3-216ENST00000481242 DDX19BQ9UMR2 479 aa11.71□□□□□ -0.54
GARNL3-216ENST00000481242 PRXQ9BXM0 1461 aa11.71□□□□□ -0.54
GARNL3-216ENST00000481242 LAMC3Q9Y6N6 1575 aa11.71□□□□□ -0.54
GARNL3-216ENST00000481242 RUFY2Q8WXA3 655 aa11.7□□□□□ -0.54
GARNL3-216ENST00000481242 NLRP6P59044 892 aa11.7□□□□□ -0.54
GARNL3-216ENST00000481242 ZNF692Q9BU19 519 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-216ENST00000481242 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
GARNL3-216ENST00000481242 SCAPERQ9BY12 1400 aa11.7□□□□□ -0.54
GARNL3-216ENST00000481242 TPM4P67936 248 aa11.7□□□□□ -0.54
GARNL3-216ENST00000481242 CLSTN1O94985 981 aa11.7□□□□□ -0.54
GARNL3-216ENST00000481242 RRP7AQ9Y3A4 280 aaKnown RBP11.7□□□□□ -0.54
GARNL3-216ENST00000481242 KIF16BQ96L93 1317 aa11.69□□□□□ -0.54
GARNL3-216ENST00000481242 RIPK4P57078 832 aa11.69□□□□□ -0.54
GARNL3-216ENST00000481242 CPLX2Q6PUV4 134 aaKnown RBP11.69□□□□□ -0.54
GARNL3-216ENST00000481242 CENPQQ7L2Z9 268 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-216ENST00000481242 ANKLE2Q86XL3 938 aa11.69□□□□□ -0.54
GARNL3-216ENST00000481242 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-216ENST00000481242 C9orf84Q5VXU9 1444 aa11.69□□□□□ -0.54
GARNL3-216ENST00000481242 APAF1O14727 1248 aa11.69□□□□□ -0.54
GARNL3-216ENST00000481242 MSH5O43196 834 aa11.69□□□□□ -0.54
GARNL3-216ENST00000481242 KIAA2012Q0VF49 1180 aa11.69□□□□□ -0.54
GARNL3-216ENST00000481242 ANO8Q9HCE9 1232 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-216ENST00000481242 TOMM22Q9NS69 142 aa11.68□□□□□ -0.54
GARNL3-216ENST00000481242 NLRP2Q9NX02 1062 aa11.68□□□□□ -0.54
GARNL3-216ENST00000481242 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
GARNL3-216ENST00000481242 ELL2O00472 640 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-216ENST00000481242 IPO9Q96P70 1041 aaKnown RBP11.67□□□□□ -0.54
GARNL3-216ENST00000481242 HECW1Q76N89 1606 aa11.67□□□□□ -0.54
GARNL3-216ENST00000481242 ANKRD30BQ9BXX2 1392 aa11.67□□□□□ -0.54
GARNL3-216ENST00000481242 EIF2S2P20042 333 aaKnown RBP11.66□□□□□ -0.54
GARNL3-216ENST00000481242 SYTL4Q96C24 671 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-216ENST00000481242 MFAP1P55081 439 aaKnown RBP11.66□□□□□ -0.54
GARNL3-216ENST00000481242 SYNE3Q6ZMZ3 975 aa11.66□□□□□ -0.54
GARNL3-216ENST00000481242 DRC7Q8IY82 874 aa11.66□□□□□ -0.54
GARNL3-216ENST00000481242 CCDC7Q96M83 1385 aa11.65□□□□□ -0.54
GARNL3-216ENST00000481242 ATP6V1DQ9Y5K8 247 aa11.65□□□□□ -0.54
GARNL3-216ENST00000481242 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
GARNL3-216ENST00000481242 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.54
GARNL3-216ENST00000481242 AKAP17AQ02040 695 aaKnown RBP11.65□□□□□ -0.54
GARNL3-216ENST00000481242 FKBP5Q13451 457 aaPredicted RBP11.65□□□□□ -0.54
GARNL3-216ENST00000481242 PLEKHO1Q53GL0 409 aaPredicted RBP11.65□□□□□ -0.54
GARNL3-216ENST00000481242 SYNJ1O43426 1573 aa11.65□□□□□ -0.55
GARNL3-216ENST00000481242 REC8O95072 547 aa11.64□□□□□ -0.55
GARNL3-216ENST00000481242 G3BP1Q13283 466 aaKnown RBP eCLIP11.64□□□□□ -0.55
GARNL3-216ENST00000481242 RASSF8Q8NHQ8 419 aa11.64□□□□□ -0.55
GARNL3-216ENST00000481242 DIAPH3Q9NSV4 1193 aa11.64□□□□□ -0.55
GARNL3-216ENST00000481242 ARAP1Q96P48 1450 aa11.64□□□□□ -0.55
GARNL3-216ENST00000481242 ABTB2Q8N961 1025 aa11.64□□□□□ -0.55
GARNL3-216ENST00000481242 SMG6Q86US8 1419 aaKnown RBP11.64□□□□□ -0.55
GARNL3-216ENST00000481242 KIAA1107Q9UPP5 1409 aa11.64□□□□□ -0.55
GARNL3-216ENST00000481242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.64□□□□□ -0.55
GARNL3-216ENST00000481242 DZIP1LQ8IYY4 767 aaKnown RBP11.64□□□□□ -0.55
GARNL3-216ENST00000481242 MARCH6O60337 910 aa11.63□□□□□ -0.55
GARNL3-216ENST00000481242 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-216ENST00000481242 CFAP70Q5T0N1 1121 aa11.63□□□□□ -0.55
GARNL3-216ENST00000481242 CNTLNQ9NXG0 1405 aa11.63□□□□□ -0.55
GARNL3-216ENST00000481242 IFIT2P09913 472 aaKnown RBP11.63□□□□□ -0.55
GARNL3-216ENST00000481242 MSNP26038 577 aaKnown RBP11.63□□□□□ -0.55
GARNL3-216ENST00000481242 ESCO1Q5FWF5 840 aa11.63□□□□□ -0.55
GARNL3-216ENST00000481242 ANKRD45Q5TZF3 282 aa11.63□□□□□ -0.55
GARNL3-216ENST00000481242 TMEM132EQ6IEE7 984 aa11.63□□□□□ -0.55
GARNL3-216ENST00000481242 VPS37DQ86XT2 251 aa11.63□□□□□ -0.55
GARNL3-216ENST00000481242 TRIM34Q9BYJ4 488 aa11.63□□□□□ -0.55
GARNL3-216ENST00000481242 MAGI1Q96QZ7 1491 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-216ENST00000481242 GGNBP2Q9H3C7 697 aa11.62□□□□□ -0.55
GARNL3-216ENST00000481242 CABP2Q9NPB3 220 aa11.62□□□□□ -0.55
GARNL3-216ENST00000481242 KIF7Q2M1P5 1343 aa11.62□□□□□ -0.55
GARNL3-216ENST00000481242 BRD4O60885 1362 aaPredicted RBP11.62□□□□□ -0.55
GARNL3-216ENST00000481242 PHF14O94880 888 aa11.62□□□□□ -0.55
GARNL3-216ENST00000481242 RNF20Q5VTR2 975 aa11.62□□□□□ -0.55
GARNL3-216ENST00000481242 SF3A1Q15459 793 aaKnown RBP11.61□□□□□ -0.55
GARNL3-216ENST00000481242 PPP6R1Q9UPN7 881 aa11.61□□□□□ -0.55
GARNL3-216ENST00000481242 RRP1P56182 461 aaKnown RBP11.61□□□□□ -0.55
GARNL3-216ENST00000481242 ERC2O15083 957 aa11.61□□□□□ -0.55
GARNL3-216ENST00000481242 PNISRQ8TF01 805 aaKnown RBP11.61□□□□□ -0.55
GARNL3-216ENST00000481242 RILPL2Q969X0 211 aa11.61□□□□□ -0.55
GARNL3-216ENST00000481242 ATAD2Q6PL18 1390 aa11.6□□□□□ -0.55
GARNL3-216ENST00000481242 PRAM1Q96QH2 718 aa11.6□□□□□ -0.55
GARNL3-216ENST00000481242 TRDNQ13061 729 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms