RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 BCANQ96GW7 911 aa29.91■■■□□ 2.38
CTSA-206ENST00000480961 ZFYVE9O95405 1425 aa29.9■■■□□ 2.38
CTSA-206ENST00000480961 MED14O60244 1454 aa29.89■■■□□ 2.38
CTSA-206ENST00000480961 HDGFP51858 240 aaKnown RBP29.89■■■□□ 2.38
CTSA-206ENST00000480961 ANKRD30BQ9BXX2 1392 aa29.89■■■□□ 2.37
CTSA-206ENST00000480961 RGL3Q3MIN7 710 aa29.88■■■□□ 2.37
CTSA-206ENST00000480961 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.87■■■□□ 2.37
CTSA-206ENST00000480961 MYO5BQ9ULV0 1848 aa29.87■■■□□ 2.37
CTSA-206ENST00000480961 POLR1AO95602 1720 aaPredicted RBP29.86■■■□□ 2.37
CTSA-206ENST00000480961 ZNF335Q9H4Z2 1342 aaPredicted RBP29.86■■■□□ 2.37
CTSA-206ENST00000480961 SLC26A8Q96RN1 970 aa29.85■■■□□ 2.37
CTSA-206ENST00000480961 IQGAP1P46940 1657 aa29.79■■■□□ 2.36
CTSA-206ENST00000480961 PLEKHG1Q9ULL1 1385 aa29.78■■■□□ 2.36
CTSA-206ENST00000480961 SPATA31E1Q6ZUB1 1445 aa29.78■■■□□ 2.36
CTSA-206ENST00000480961 KIF1BO60333 1816 aa29.75■■■□□ 2.35
CTSA-206ENST00000480961 DHX57Q6P158 1386 aaKnown RBP29.75■■■□□ 2.35
CTSA-206ENST00000480961 RPGRIP1LQ68CZ1 1315 aa29.74■■■□□ 2.35
CTSA-206ENST00000480961 NEXMIFQ5QGS0 1516 aa29.73■■■□□ 2.35
CTSA-206ENST00000480961 VGFO15240 615 aaPredicted RBP29.71■■■□□ 2.35
CTSA-206ENST00000480961 CERKQ8TCT0 537 aa29.7■■■□□ 2.35
CTSA-206ENST00000480961 SIN3AQ96ST3 1273 aa29.68■■■□□ 2.34
CTSA-206ENST00000480961 LTBP4Q8N2S1 1624 aa29.67■■■□□ 2.34
CTSA-206ENST00000480961 TBX22Q9Y458 520 aa29.67■■■□□ 2.34
CTSA-206ENST00000480961 ADAMTS13Q76LX8 1427 aa29.67■■■□□ 2.34
CTSA-206ENST00000480961 ADGRF5Q8IZF2 1346 aa29.67■■■□□ 2.34
CTSA-206ENST00000480961 NEUROD1Q13562 356 aa29.63■■■□□ 2.33
CTSA-206ENST00000480961 KCNA6P17658 529 aa29.61■■■□□ 2.33
CTSA-206ENST00000480961 KDM2AQ9Y2K7 1162 aa29.61■■■□□ 2.33
CTSA-206ENST00000480961 DCAF11Q8TEB1 546 aa29.6■■■□□ 2.33
CTSA-206ENST00000480961 METP08581 1390 aa29.56■■■□□ 2.32
CTSA-206ENST00000480961 RBM33Q96EV2 1170 aaKnown RBP29.56■■■□□ 2.32
CTSA-206ENST00000480961 SETBP1Q9Y6X0 1596 aa29.56■■■□□ 2.32
CTSA-206ENST00000480961 PPLO60437 1756 aa29.55■■■□□ 2.32
CTSA-206ENST00000480961 NRXN3Q9Y4C0 1643 aa29.55■■■□□ 2.32
CTSA-206ENST00000480961 STRCP1A6NGW2 1772 aa29.52■■■□□ 2.32
CTSA-206ENST00000480961 CPS1P31327 1500 aa29.52■■■□□ 2.32
CTSA-206ENST00000480961 AMOTL2Q9Y2J4 779 aa29.52■■■□□ 2.32
CTSA-206ENST00000480961 PTPRUQ92729 1446 aa29.52■■■□□ 2.32
CTSA-206ENST00000480961 PROSER2Q86WR7 435 aaPredicted RBP29.51■■■□□ 2.31
CTSA-206ENST00000480961 DIP2AQ14689 1571 aa29.5■■■□□ 2.31
CTSA-206ENST00000480961 LRRC7Q96NW7 1537 aa29.49■■■□□ 2.31
CTSA-206ENST00000480961 PIK3R4Q99570 1358 aa29.48■■■□□ 2.31
CTSA-206ENST00000480961 ALKQ9UM73 1620 aa29.47■■■□□ 2.31
CTSA-206ENST00000480961 CFAP70Q5T0N1 1121 aa29.47■■■□□ 2.31
CTSA-206ENST00000480961 L3MBTL2Q969R5 705 aa29.47■■■□□ 2.31
CTSA-206ENST00000480961 IFT172Q9UG01 1749 aa29.47■■■□□ 2.31
CTSA-206ENST00000480961 PIK3C2GO75747 1445 aa29.46■■■□□ 2.31
CTSA-206ENST00000480961 TMEM132EQ6IEE7 984 aa29.46■■■□□ 2.31
CTSA-206ENST00000480961 MYOM2P54296 1465 aa29.45■■■□□ 2.31
CTSA-206ENST00000480961 TMEM94Q12767 1356 aa29.44■■■□□ 2.3
CTSA-206ENST00000480961 NRXN1Q9ULB1 1477 aa29.43■■■□□ 2.3
CTSA-206ENST00000480961 C14orf93Q9H972 538 aaKnown RBP29.43■■■□□ 2.3
CTSA-206ENST00000480961 STK26Q9P289 416 aa29.42■■■□□ 2.3
CTSA-206ENST00000480961 NWD1Q149M9 1564 aa29.42■■■□□ 2.3
CTSA-206ENST00000480961 UBAP1LF5GYI3 381 aa29.39■■■□□ 2.3
CTSA-206ENST00000480961 STAC3Q96MF2 364 aa29.39■■■□□ 2.3
CTSA-206ENST00000480961 NKTRP30414 1462 aaKnown RBP29.39■■■□□ 2.3
CTSA-206ENST00000480961 CHD2O14647 1828 aaKnown RBP29.38■■■□□ 2.29
CTSA-206ENST00000480961 FBXO41Q8TF61 875 aa29.38■■■□□ 2.29
CTSA-206ENST00000480961 CCER1Q8TC90 406 aaPredicted RBP29.37■■■□□ 2.29
CTSA-206ENST00000480961 IQSEC2Q5JU85 1478 aa29.36■■■□□ 2.29
CTSA-206ENST00000480961 C14orf37Q86TY3 774 aa29.36■■■□□ 2.29
CTSA-206ENST00000480961 ILDR1Q86SU0 546 aaPredicted RBP29.35■■■□□ 2.29
CTSA-206ENST00000480961 SETD1AO15047 1707 aaKnown RBP29.34■■■□□ 2.29
CTSA-206ENST00000480961 ASXL1Q8IXJ9 1541 aa29.32■■■□□ 2.28
CTSA-206ENST00000480961 ROBO2Q9HCK4 1378 aa29.32■■■□□ 2.28
CTSA-206ENST00000480961 LRPPRCP42704 1394 aaKnown RBP29.3■■■□□ 2.28
CTSA-206ENST00000480961 TONSLQ96HA7 1378 aa29.3■■■□□ 2.28
CTSA-206ENST00000480961 XRN1Q8IZH2 1706 aaKnown RBP29.29■■■□□ 2.28
CTSA-206ENST00000480961 PIP4K2BP78356 416 aa29.29■■■□□ 2.28
CTSA-206ENST00000480961 TOM1O60784 492 aa29.28■■■□□ 2.28
CTSA-206ENST00000480961 PRAG1Q86YV5 1406 aa29.28■■■□□ 2.28
CTSA-206ENST00000480961 YTHDC2Q9H6S0 1430 aaKnown RBP29.28■■■□□ 2.28
CTSA-206ENST00000480961 SCAF1Q9H7N4 1312 aaKnown RBP29.27■■■□□ 2.28
CTSA-206ENST00000480961 WAPLQ7Z5K2 1190 aa29.27■■■□□ 2.28
CTSA-206ENST00000480961 NBPF1Q3BBV0 1214 aa29.26■■■□□ 2.27
CTSA-206ENST00000480961 MSH6P52701 1360 aa29.25■■■□□ 2.27
CTSA-206ENST00000480961 ABCC11Q96J66 1382 aa29.25■■■□□ 2.27
CTSA-206ENST00000480961 XIRP1Q702N8 1843 aaKnown RBP29.24■■■□□ 2.27
CTSA-206ENST00000480961 C19orf44Q9H6X5 657 aa29.23■■■□□ 2.27
CTSA-206ENST00000480961 TRAK1Q9UPV9 953 aa29.23■■■□□ 2.27
CTSA-206ENST00000480961 PTCH1Q13635 1447 aa29.22■■■□□ 2.27
CTSA-206ENST00000480961 NBPF8Q3BBV2 869 aa29.22■■■□□ 2.27
CTSA-206ENST00000480961 PLEKHH1Q9ULM0 1364 aa29.21■■■□□ 2.27
CTSA-206ENST00000480961 CLSPNQ9HAW4 1339 aa29.2■■■□□ 2.27
CTSA-206ENST00000480961 NCOA3Q9Y6Q9 1424 aa29.2■■■□□ 2.27
CTSA-206ENST00000480961 ADGRB1O14514 1584 aa29.2■■■□□ 2.26
CTSA-206ENST00000480961 LAMC1P11047 1609 aa29.19■■■□□ 2.26
CTSA-206ENST00000480961 TECPR2O15040 1411 aa29.19■■■□□ 2.26
CTSA-206ENST00000480961 ATF3P18847 181 aa29.18■■■□□ 2.26
CTSA-206ENST00000480961 SAFB2Q14151 953 aaKnown RBP eCLIP29.18■■■□□ 2.26
CTSA-206ENST00000480961 PRAM1Q96QH2 718 aa29.17■■■□□ 2.26
CTSA-206ENST00000480961 POGKQ9P215 609 aa29.15■■■□□ 2.26
CTSA-206ENST00000480961 SIRT1Q96EB6 747 aa29.14■■■□□ 2.26
CTSA-206ENST00000480961 SLAIN2Q9P270 581 aa29.14■■■□□ 2.26
CTSA-206ENST00000480961 ADGRL3Q9HAR2 1447 aa29.13■■■□□ 2.25
CTSA-206ENST00000480961 CADPS2Q86UW7 1296 aa29.13■■■□□ 2.25
CTSA-206ENST00000480961 FAM135BQ49AJ0 1406 aa29.1■■■□□ 2.25
CTSA-206ENST00000480961 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.08■■■□□ 2.25
CTSA-206ENST00000480961 ROCK2O75116 1388 aaKnown RBP29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms