RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
SRGAP3-206ENST00000480750 TOM1O60784 492 aa13.72□□□□□ -0.21
SRGAP3-206ENST00000480750 NAIPQ13075 1403 aa13.71□□□□□ -0.22
SRGAP3-206ENST00000480750 KIF1BO60333 1816 aa13.7□□□□□ -0.22
SRGAP3-206ENST00000480750 PIP4K2BP78356 416 aa13.7□□□□□ -0.22
SRGAP3-206ENST00000480750 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
SRGAP3-206ENST00000480750 SLC26A8Q96RN1 970 aa13.69□□□□□ -0.22
SRGAP3-206ENST00000480750 RIMS2Q9UQ26 1411 aa13.69□□□□□ -0.22
SRGAP3-206ENST00000480750 LRRC7Q96NW7 1537 aa13.69□□□□□ -0.22
SRGAP3-206ENST00000480750 XIRP1Q702N8 1843 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-206ENST00000480750 HFM1A2PYH4 1435 aa13.68□□□□□ -0.22
SRGAP3-206ENST00000480750 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.68□□□□□ -0.22
SRGAP3-206ENST00000480750 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
SRGAP3-206ENST00000480750 CHD2O14647 1828 aaKnown RBP13.66□□□□□ -0.22
SRGAP3-206ENST00000480750 ZFYVE9O95405 1425 aa13.65□□□□□ -0.22
SRGAP3-206ENST00000480750 ZNF326Q5BKZ1 582 aaKnown RBP13.65□□□□□ -0.22
SRGAP3-206ENST00000480750 PLEKHG1Q9ULL1 1385 aa13.65□□□□□ -0.22
SRGAP3-206ENST00000480750 CLTCL1P53675 1640 aa13.64□□□□□ -0.23
SRGAP3-206ENST00000480750 KCNA6P17658 529 aa13.63□□□□□ -0.23
SRGAP3-206ENST00000480750 SLC4A1APQ9BWU0 796 aaKnown RBP13.63□□□□□ -0.23
SRGAP3-206ENST00000480750 TRPM2O94759 1503 aa13.63□□□□□ -0.23
SRGAP3-206ENST00000480750 NWD1Q149M9 1564 aa13.62□□□□□ -0.23
SRGAP3-206ENST00000480750 PROSER2Q86WR7 435 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-206ENST00000480750 DIP2AQ14689 1571 aa13.62□□□□□ -0.23
SRGAP3-206ENST00000480750 DISP3Q9P2K9 1392 aa13.61□□□□□ -0.23
SRGAP3-206ENST00000480750 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
SRGAP3-206ENST00000480750 TMEM94Q12767 1356 aa13.59□□□□□ -0.23
SRGAP3-206ENST00000480750 HSPA1LP34931 641 aa13.59□□□□□ -0.23
SRGAP3-206ENST00000480750 ALKQ9UM73 1620 aa13.59□□□□□ -0.23
SRGAP3-206ENST00000480750 TBX22Q9Y458 520 aa13.58□□□□□ -0.24
SRGAP3-206ENST00000480750 C14orf37Q86TY3 774 aa13.57□□□□□ -0.24
SRGAP3-206ENST00000480750 MSH6P52701 1360 aa13.57□□□□□ -0.24
SRGAP3-206ENST00000480750 ADAMTS13Q76LX8 1427 aa13.56□□□□□ -0.24
SRGAP3-206ENST00000480750 NEXMIFQ5QGS0 1516 aa13.54□□□□□ -0.24
SRGAP3-206ENST00000480750 NRXN3Q9Y4C0 1643 aa13.54□□□□□ -0.24
SRGAP3-206ENST00000480750 PPLO60437 1756 aa13.54□□□□□ -0.24
SRGAP3-206ENST00000480750 ACIN1Q9UKV3 1341 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-206ENST00000480750 PIK3R4Q99570 1358 aa13.54□□□□□ -0.24
SRGAP3-206ENST00000480750 SETBP1Q9Y6X0 1596 aa13.54□□□□□ -0.24
SRGAP3-206ENST00000480750 ROBO1Q9Y6N7 1651 aa13.53□□□□□ -0.24
SRGAP3-206ENST00000480750 MPHOSPH9Q99550 1183 aa13.53□□□□□ -0.24
SRGAP3-206ENST00000480750 SETD5Q9C0A6 1442 aa13.53□□□□□ -0.24
SRGAP3-206ENST00000480750 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
SRGAP3-206ENST00000480750 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.51□□□□□ -0.25
SRGAP3-206ENST00000480750 AMOTL2Q9Y2J4 779 aa13.51□□□□□ -0.25
SRGAP3-206ENST00000480750 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-206ENST00000480750 RGL3Q3MIN7 710 aa13.5□□□□□ -0.25
SRGAP3-206ENST00000480750 XRN1Q8IZH2 1706 aaKnown RBP13.5□□□□□ -0.25
SRGAP3-206ENST00000480750 MED1Q15648 1581 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-206ENST00000480750 RPGRIP1LQ68CZ1 1315 aa13.49□□□□□ -0.25
SRGAP3-206ENST00000480750 PHLPP1O60346 1717 aa13.49□□□□□ -0.25
SRGAP3-206ENST00000480750 FAM135BQ49AJ0 1406 aa13.48□□□□□ -0.25
SRGAP3-206ENST00000480750 PTPRUQ92729 1446 aa13.48□□□□□ -0.25
SRGAP3-206ENST00000480750 NCOA3Q9Y6Q9 1424 aa13.48□□□□□ -0.25
SRGAP3-206ENST00000480750 RAB3GAP2Q9H2M9 1393 aa13.48□□□□□ -0.25
SRGAP3-206ENST00000480750 ATF3P18847 181 aa13.48□□□□□ -0.25
SRGAP3-206ENST00000480750 SLAIN2Q9P270 581 aa13.47□□□□□ -0.25
SRGAP3-206ENST00000480750 IFT172Q9UG01 1749 aa13.47□□□□□ -0.25
SRGAP3-206ENST00000480750 METP08581 1390 aa13.46□□□□□ -0.25
SRGAP3-206ENST00000480750 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.25
SRGAP3-206ENST00000480750 SETD1AO15047 1707 aaKnown RBP13.46□□□□□ -0.25
SRGAP3-206ENST00000480750 ILDR2Q71H61 639 aa13.45□□□□□ -0.26
SRGAP3-206ENST00000480750 C19orf44Q9H6X5 657 aa13.45□□□□□ -0.26
SRGAP3-206ENST00000480750 NALCNQ8IZF0 1738 aa13.43□□□□□ -0.26
SRGAP3-206ENST00000480750 ADGRF5Q8IZF2 1346 aa13.42□□□□□ -0.26
SRGAP3-206ENST00000480750 ANKRD30BQ9BXX2 1392 aa13.41□□□□□ -0.26
SRGAP3-206ENST00000480750 DCCP43146 1447 aa13.4□□□□□ -0.26
SRGAP3-206ENST00000480750 SPATA31E1Q6ZUB1 1445 aa13.4□□□□□ -0.26
SRGAP3-206ENST00000480750 PTCH1Q13635 1447 aa13.39□□□□□ -0.27
SRGAP3-206ENST00000480750 ADGRL3Q9HAR2 1447 aa13.39□□□□□ -0.27
SRGAP3-206ENST00000480750 TMEM132EQ6IEE7 984 aa13.38□□□□□ -0.27
SRGAP3-206ENST00000480750 STK26Q9P289 416 aa13.38□□□□□ -0.27
SRGAP3-206ENST00000480750 COL16A1Q07092 1604 aaPredicted RBP13.38□□□□□ -0.27
SRGAP3-206ENST00000480750 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
SRGAP3-206ENST00000480750 LAMC1P11047 1609 aa13.36□□□□□ -0.27
SRGAP3-206ENST00000480750 AHDC1Q5TGY3 1603 aaPredicted RBP13.36□□□□□ -0.27
SRGAP3-206ENST00000480750 JCADQ9P266 1359 aa13.36□□□□□ -0.27
SRGAP3-206ENST00000480750 ROBO2Q9HCK4 1378 aa13.35□□□□□ -0.27
SRGAP3-206ENST00000480750 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
SRGAP3-206ENST00000480750 DDX17Q92841 729 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-206ENST00000480750 MST1RQ04912 1400 aa13.35□□□□□ -0.27
SRGAP3-206ENST00000480750 NHSL1Q5SYE7 1610 aa13.35□□□□□ -0.27
SRGAP3-206ENST00000480750 SHPRHQ149N8 1683 aa13.34□□□□□ -0.27
SRGAP3-206ENST00000480750 PIK3C2GO75747 1445 aa13.34□□□□□ -0.27
SRGAP3-206ENST00000480750 HRCP23327 699 aa13.34□□□□□ -0.27
SRGAP3-206ENST00000480750 BRINP3Q76B58 766 aa13.34□□□□□ -0.27
SRGAP3-206ENST00000480750 KDM2AQ9Y2K7 1162 aa13.34□□□□□ -0.27
SRGAP3-206ENST00000480750 SOCS7O14512 581 aa13.33□□□□□ -0.28
SRGAP3-206ENST00000480750 PRAG1Q86YV5 1406 aa13.32□□□□□ -0.28
SRGAP3-206ENST00000480750 MYOM2P54296 1465 aa13.32□□□□□ -0.28
SRGAP3-206ENST00000480750 CFAP70Q5T0N1 1121 aa13.32□□□□□ -0.28
SRGAP3-206ENST00000480750 WAPLQ7Z5K2 1190 aa13.32□□□□□ -0.28
SRGAP3-206ENST00000480750 MEX3CQ5U5Q3 659 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-206ENST00000480750 LRPPRCP42704 1394 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-206ENST00000480750 NUTM2FA1L443 756 aa13.3□□□□□ -0.28
SRGAP3-206ENST00000480750 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
SRGAP3-206ENST00000480750 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
SRGAP3-206ENST00000480750 YTHDC2Q9H6S0 1430 aaKnown RBP13.3□□□□□ -0.28
SRGAP3-206ENST00000480750 C1orf167Q5SNV9 1468 aa13.29□□□□□ -0.28
SRGAP3-206ENST00000480750 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms