RNA–Protein interactions for RNA: ENST00000480181.1

CLIC3-202, Transcript of chloride intracellular channel 3, humanhuman

TSL 3

Gene CLIC3, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-202ENST00000480181 NKTRP30414 1462 aaKnown RBP32.02■■■□□ 2.72
CLIC3-202ENST00000480181 MSH6P52701 1360 aa31.95■■■□□ 2.71
CLIC3-202ENST00000480181 NWD1Q149M9 1564 aa31.95■■■□□ 2.71
CLIC3-202ENST00000480181 PPP1R15AO75807 674 aaPredicted RBP31.95■■■□□ 2.71
CLIC3-202ENST00000480181 PLEKHG1Q9ULL1 1385 aa31.94■■■□□ 2.7
CLIC3-202ENST00000480181 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.92■■■□□ 2.7
CLIC3-202ENST00000480181 ZFYVE9O95405 1425 aa31.91■■■□□ 2.7
CLIC3-202ENST00000480181 RIMS2Q9UQ26 1411 aa31.9■■■□□ 2.7
CLIC3-202ENST00000480181 ROBO1Q9Y6N7 1651 aa31.89■■■□□ 2.7
CLIC3-202ENST00000480181 GCC2Q8IWJ2 1684 aa31.89■■■□□ 2.7
CLIC3-202ENST00000480181 TBX22Q9Y458 520 aa31.87■■■□□ 2.69
CLIC3-202ENST00000480181 RBM33Q96EV2 1170 aaKnown RBP31.86■■■□□ 2.69
CLIC3-202ENST00000480181 SLAIN2Q9P270 581 aa31.86■■■□□ 2.69
CLIC3-202ENST00000480181 RGS17Q9UGC6 210 aaPredicted RBP31.86■■■□□ 2.69
CLIC3-202ENST00000480181 ROCK1Q13464 1354 aa31.85■■■□□ 2.69
CLIC3-202ENST00000480181 TMEM131LA2VDJ0 1609 aa31.85■■■□□ 2.69
CLIC3-202ENST00000480181 UNC13BO14795 1591 aa31.85■■■□□ 2.69
CLIC3-202ENST00000480181 NCOA3Q9Y6Q9 1424 aa31.84■■■□□ 2.69
CLIC3-202ENST00000480181 CHD2O14647 1828 aaKnown RBP31.82■■■□□ 2.68
CLIC3-202ENST00000480181 CHGAP10645 457 aaKnown RBP31.82■■■□□ 2.68
CLIC3-202ENST00000480181 MYO5BQ9ULV0 1848 aa31.8■■■□□ 2.68
CLIC3-202ENST00000480181 PIK3R4Q99570 1358 aa31.78■■■□□ 2.68
CLIC3-202ENST00000480181 DIP2AQ14689 1571 aa31.76■■■□□ 2.67
CLIC3-202ENST00000480181 C14orf37Q86TY3 774 aa31.75■■■□□ 2.67
CLIC3-202ENST00000480181 JCADQ9P266 1359 aa31.75■■■□□ 2.67
CLIC3-202ENST00000480181 IQGAP3Q86VI3 1631 aa31.74■■■□□ 2.67
CLIC3-202ENST00000480181 E9PCH4 1651 aa31.73■■■□□ 2.67
CLIC3-202ENST00000480181 PHLPP1O60346 1717 aa31.72■■■□□ 2.67
CLIC3-202ENST00000480181 CADPS2Q86UW7 1296 aa31.72■■■□□ 2.67
CLIC3-202ENST00000480181 NUP155O75694 1391 aa31.71■■■□□ 2.67
CLIC3-202ENST00000480181 C19orf44Q9H6X5 657 aa31.7■■■□□ 2.67
CLIC3-202ENST00000480181 POTEAQ6S8J7 498 aa31.69■■■□□ 2.66
CLIC3-202ENST00000480181 ADAMTS13Q76LX8 1427 aa31.68■■■□□ 2.66
CLIC3-202ENST00000480181 ATF3P18847 181 aa31.68■■■□□ 2.66
CLIC3-202ENST00000480181 TRPM2O94759 1503 aa31.65■■■□□ 2.66
CLIC3-202ENST00000480181 NUTM2DQ5VT03 806 aaPredicted RBP31.64■■■□□ 2.66
CLIC3-202ENST00000480181 SPATA31A6Q5VVP1 1343 aa31.62■■■□□ 2.65
CLIC3-202ENST00000480181 AMOTL2Q9Y2J4 779 aa31.6■■■□□ 2.65
CLIC3-202ENST00000480181 ITGAEP38570 1179 aa31.59■■■□□ 2.65
CLIC3-202ENST00000480181 COL16A1Q07092 1604 aaPredicted RBP31.59■■■□□ 2.65
CLIC3-202ENST00000480181 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.58■■■□□ 2.65
CLIC3-202ENST00000480181 AHDC1Q5TGY3 1603 aaPredicted RBP31.55■■■□□ 2.64
CLIC3-202ENST00000480181 MEX3CQ5U5Q3 659 aaKnown RBP31.54■■■□□ 2.64
CLIC3-202ENST00000480181 DCCP43146 1447 aa31.54■■■□□ 2.64
CLIC3-202ENST00000480181 ZNF326Q5BKZ1 582 aaKnown RBP31.52■■■□□ 2.64
CLIC3-202ENST00000480181 ZNF772Q68DY9 489 aaPredicted RBP31.52■■■□□ 2.64
CLIC3-202ENST00000480181 SETBP1Q9Y6X0 1596 aa31.5■■■□□ 2.63
CLIC3-202ENST00000480181 SPHKAPQ2M3C7 1700 aa31.49■■■□□ 2.63
CLIC3-202ENST00000480181 PTPRUQ92729 1446 aa31.49■■■□□ 2.63
CLIC3-202ENST00000480181 SHPRHQ149N8 1683 aa31.47■■■□□ 2.63
CLIC3-202ENST00000480181 BRINP3Q76B58 766 aa31.46■■■□□ 2.63
CLIC3-202ENST00000480181 XRN1Q8IZH2 1706 aaKnown RBP31.43■■■□□ 2.62
CLIC3-202ENST00000480181 LRP6O75581 1613 aa31.42■■■□□ 2.62
CLIC3-202ENST00000480181 NRXN3Q9Y4C0 1643 aa31.42■■■□□ 2.62
CLIC3-202ENST00000480181 METP08581 1390 aa31.37■■■□□ 2.61
CLIC3-202ENST00000480181 ASXL1Q8IXJ9 1541 aa31.37■■■□□ 2.61
CLIC3-202ENST00000480181 SETD5Q9C0A6 1442 aa31.36■■■□□ 2.61
CLIC3-202ENST00000480181 PPARGC1BQ86YN6 1023 aaKnown RBP31.36■■■□□ 2.61
CLIC3-202ENST00000480181 LRRC59Q96AG4 307 aaKnown RBP31.36■■■□□ 2.61
CLIC3-202ENST00000480181 MST1RQ04912 1400 aa31.35■■■□□ 2.61
CLIC3-202ENST00000480181 ADGRL3Q9HAR2 1447 aa31.33■■■□□ 2.61
CLIC3-202ENST00000480181 SETD1AO15047 1707 aaKnown RBP31.32■■■□□ 2.61
CLIC3-202ENST00000480181 NUTM2BA6NNL0 878 aaPredicted RBP31.32■■■□□ 2.6
CLIC3-202ENST00000480181 NUTM2EB1AL46 878 aaPredicted RBP31.32■■■□□ 2.6
CLIC3-202ENST00000480181 RXRBP28702 533 aa31.32■■■□□ 2.6
CLIC3-202ENST00000480181 NUTM2AQ8IVF1 878 aaPredicted RBP31.32■■■□□ 2.6
CLIC3-202ENST00000480181 NEXMIFQ5QGS0 1516 aa31.32■■■□□ 2.6
CLIC3-202ENST00000480181 VGFO15240 615 aaPredicted RBP31.31■■■□□ 2.6
CLIC3-202ENST00000480181 CLTCL1P53675 1640 aa31.31■■■□□ 2.6
CLIC3-202ENST00000480181 KIF1BO60333 1816 aa31.31■■■□□ 2.6
CLIC3-202ENST00000480181 RRBP1Q9P2E9 1410 aaKnown RBP31.3■■■□□ 2.6
CLIC3-202ENST00000480181 NHSL1Q5SYE7 1610 aa31.29■■■□□ 2.6
CLIC3-202ENST00000480181 NAIPQ13075 1403 aa31.27■■■□□ 2.6
CLIC3-202ENST00000480181 TRIM52Q96A61 297 aa31.27■■■□□ 2.6
CLIC3-202ENST00000480181 RPGRIP1LQ68CZ1 1315 aa31.25■■■□□ 2.59
CLIC3-202ENST00000480181 CDK12Q9NYV4 1490 aaPredicted RBP31.25■■■□□ 2.59
CLIC3-202ENST00000480181 PTCH1Q13635 1447 aa31.23■■■□□ 2.59
CLIC3-202ENST00000480181 AFF2P51816 1311 aa31.23■■■□□ 2.59
CLIC3-202ENST00000480181 UPF1Q92900 1129 aaKnown RBP eCLIP31.22■■■□□ 2.59
CLIC3-202ENST00000480181 NALCNQ8IZF0 1738 aa31.19■■■□□ 2.58
CLIC3-202ENST00000480181 C1orf167Q5SNV9 1468 aa31.18■■■□□ 2.58
CLIC3-202ENST00000480181 PNPLA6Q8IY17 1366 aa31.17■■■□□ 2.58
CLIC3-202ENST00000480181 HFM1A2PYH4 1435 aa31.16■■■□□ 2.58
CLIC3-202ENST00000480181 SLC4A1APQ9BWU0 796 aaKnown RBP31.16■■■□□ 2.58
CLIC3-202ENST00000480181 PRAG1Q86YV5 1406 aa31.15■■■□□ 2.58
CLIC3-202ENST00000480181 C8orf37Q96NL8 207 aa31.15■■■□□ 2.58
CLIC3-202ENST00000480181 RBM6P78332 1123 aaKnown RBP31.12■■■□□ 2.57
CLIC3-202ENST00000480181 DDX17Q92841 729 aaKnown RBP31.12■■■□□ 2.57
CLIC3-202ENST00000480181 QTRT2Q9H974 415 aaKnown RBP31.12■■■□□ 2.57
CLIC3-202ENST00000480181 ROBO2Q9HCK4 1378 aa31.11■■■□□ 2.57
CLIC3-202ENST00000480181 LAMC1P11047 1609 aa31.1■■■□□ 2.57
CLIC3-202ENST00000480181 NGLY1Q96IV0 654 aa31.09■■■□□ 2.57
CLIC3-202ENST00000480181 SOS2Q07890 1332 aaPredicted RBP31.08■■■□□ 2.57
CLIC3-202ENST00000480181 ORAI2Q96SN7 254 aa31.05■■■□□ 2.56
CLIC3-202ENST00000480181 PPLO60437 1756 aa31.04■■■□□ 2.56
CLIC3-202ENST00000480181 ADAMTS2O95450 1211 aa31.03■■■□□ 2.56
CLIC3-202ENST00000480181 NPHP3Q7Z494 1330 aa30.99■■■□□ 2.55
CLIC3-202ENST00000480181 RGS12O14924 1447 aa30.98■■■□□ 2.55
CLIC3-202ENST00000480181 CCDC144AA2RUR9 1427 aa30.98■■■□□ 2.55
CLIC3-202ENST00000480181 USP21Q9UK80 565 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms