RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 PRAG1Q86YV5 1406 aa20.26■□□□□ 0.83
RPP40-205ENST00000479782 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
RPP40-205ENST00000479782 ZNF142P52746 1687 aaPredicted RBP20.24■□□□□ 0.83
RPP40-205ENST00000479782 PLPPR3Q6T4P5 718 aa20.23■□□□□ 0.83
RPP40-205ENST00000479782 NRXN1Q9ULB1 1477 aa20.23■□□□□ 0.83
RPP40-205ENST00000479782 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
RPP40-205ENST00000479782 TRPM1Q7Z4N2 1603 aa20.22■□□□□ 0.83
RPP40-205ENST00000479782 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
RPP40-205ENST00000479782 SETD1BQ9UPS6 1966 aaKnown RBP20.21■□□□□ 0.83
RPP40-205ENST00000479782 ZFYVE9O95405 1425 aa20.21■□□□□ 0.83
RPP40-205ENST00000479782 RALGAPBQ86X10 1494 aa20.21■□□□□ 0.83
RPP40-205ENST00000479782 KIAA1210Q9ULL0 1709 aa20.2■□□□□ 0.82
RPP40-205ENST00000479782 VGFO15240 615 aaPredicted RBP20.19■□□□□ 0.82
RPP40-205ENST00000479782 RIMS2Q9UQ26 1411 aa20.18■□□□□ 0.82
RPP40-205ENST00000479782 KDM4FA0A1W2PPD8 638 aa20.17■□□□□ 0.82
RPP40-205ENST00000479782 HDGFP51858 240 aaKnown RBP20.16■□□□□ 0.82
RPP40-205ENST00000479782 PIK3C2GO75747 1445 aa20.16■□□□□ 0.82
RPP40-205ENST00000479782 SLIT1O75093 1534 aa20.16■□□□□ 0.82
RPP40-205ENST00000479782 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.15■□□□□ 0.82
RPP40-205ENST00000479782 TMEM2Q9UHN6 1383 aa20.15■□□□□ 0.82
RPP40-205ENST00000479782 LAMC1P11047 1609 aa20.15■□□□□ 0.82
RPP40-205ENST00000479782 ADGRF5Q8IZF2 1346 aa20.14■□□□□ 0.81
RPP40-205ENST00000479782 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
RPP40-205ENST00000479782 ARHGAP23Q9P227 1491 aa20.13■□□□□ 0.81
RPP40-205ENST00000479782 ROCK2O75116 1388 aaKnown RBP20.12■□□□□ 0.81
RPP40-205ENST00000479782 GPRASP1Q5JY77 1395 aa20.12■□□□□ 0.81
RPP40-205ENST00000479782 SETBP1Q9Y6X0 1596 aa20.1■□□□□ 0.81
RPP40-205ENST00000479782 NUTM2DQ5VT03 806 aaPredicted RBP20.07■□□□□ 0.8
RPP40-205ENST00000479782 EID1Q9Y6B2 187 aa20.07■□□□□ 0.8
RPP40-205ENST00000479782 CARD11Q9BXL7 1154 aa20.06■□□□□ 0.8
RPP40-205ENST00000479782 C14orf93Q9H972 538 aaKnown RBP20.06■□□□□ 0.8
RPP40-205ENST00000479782 EIF4G2P78344 907 aaKnown RBP eCLIP20.05■□□□□ 0.8
RPP40-205ENST00000479782 NBPF1Q3BBV0 1214 aa20.04■□□□□ 0.8
RPP40-205ENST00000479782 CFAP70Q5T0N1 1121 aa20.04■□□□□ 0.8
RPP40-205ENST00000479782 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
RPP40-205ENST00000479782 NRXN3Q9Y4C0 1643 aa20.04■□□□□ 0.8
RPP40-205ENST00000479782 PLEKHG1Q9ULL1 1385 aa20.04■□□□□ 0.8
RPP40-205ENST00000479782 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
RPP40-205ENST00000479782 IQGAP1P46940 1657 aa20.03■□□□□ 0.8
RPP40-205ENST00000479782 ADGRB1O14514 1584 aa20.03■□□□□ 0.8
RPP40-205ENST00000479782 SETD1AO15047 1707 aaKnown RBP20.02■□□□□ 0.8
RPP40-205ENST00000479782 TXNDC2Q86VQ3 553 aa20.02■□□□□ 0.8
RPP40-205ENST00000479782 USP47Q96K76 1375 aa20.02■□□□□ 0.8
RPP40-205ENST00000479782 ZNF316A6NFI3 1004 aaPredicted RBP20.01■□□□□ 0.79
RPP40-205ENST00000479782 LTKP29376 864 aa20.01■□□□□ 0.79
RPP40-205ENST00000479782 DIP2AQ14689 1571 aa20■□□□□ 0.79
RPP40-205ENST00000479782 POLR1AO95602 1720 aaPredicted RBP19.99■□□□□ 0.79
RPP40-205ENST00000479782 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
RPP40-205ENST00000479782 HSPA5P11021 654 aaKnown RBP19.98■□□□□ 0.79
RPP40-205ENST00000479782 ANKLE2Q86XL3 938 aa19.98■□□□□ 0.79
RPP40-205ENST00000479782 EIF3AQ14152 1382 aaKnown RBP19.97■□□□□ 0.79
RPP40-205ENST00000479782 ADAMTS13Q76LX8 1427 aa19.95■□□□□ 0.78
RPP40-205ENST00000479782 LMTK3Q96Q04 1460 aa19.95■□□□□ 0.78
RPP40-205ENST00000479782 MED14O60244 1454 aa19.94■□□□□ 0.78
RPP40-205ENST00000479782 BCANQ96GW7 911 aa19.93■□□□□ 0.78
RPP40-205ENST00000479782 YTHDC2Q9H6S0 1430 aaKnown RBP19.92■□□□□ 0.78
RPP40-205ENST00000479782 ARHGEF28Q8N1W1 1705 aaKnown RBP19.91■□□□□ 0.78
RPP40-205ENST00000479782 TMEM132EQ6IEE7 984 aa19.91■□□□□ 0.78
RPP40-205ENST00000479782 KNDC1Q76NI1 1749 aa19.9■□□□□ 0.78
RPP40-205ENST00000479782 TBX22Q9Y458 520 aa19.9■□□□□ 0.78
RPP40-205ENST00000479782 ST20-MTHFSA0A0A6YYL1 179 aa19.89■□□□□ 0.77
RPP40-205ENST00000479782 NPHP4O75161 1426 aaPredicted RBP19.89■□□□□ 0.77
RPP40-205ENST00000479782 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.77
RPP40-205ENST00000479782 DLC1Q96QB1 1528 aa19.89■□□□□ 0.77
RPP40-205ENST00000479782 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
RPP40-205ENST00000479782 METP08581 1390 aa19.88■□□□□ 0.77
RPP40-205ENST00000479782 ABCC11Q96J66 1382 aa19.86■□□□□ 0.77
RPP40-205ENST00000479782 PIK3R4Q99570 1358 aa19.86■□□□□ 0.77
RPP40-205ENST00000479782 SLC24A1O60721 1099 aa19.86■□□□□ 0.77
RPP40-205ENST00000479782 TRAK1Q9UPV9 953 aa19.86■□□□□ 0.77
RPP40-205ENST00000479782 CPS1P31327 1500 aa19.86■□□□□ 0.77
RPP40-205ENST00000479782 TECPR2O15040 1411 aa19.85■□□□□ 0.77
RPP40-205ENST00000479782 SLC26A8Q96RN1 970 aa19.85■□□□□ 0.77
RPP40-205ENST00000479782 QRICH2Q9H0J4 1663 aa19.84■□□□□ 0.77
RPP40-205ENST00000479782 SBNO2Q9Y2G9 1366 aa19.84■□□□□ 0.77
RPP40-205ENST00000479782 CENPJQ9HC77 1338 aaPredicted RBP19.84■□□□□ 0.77
RPP40-205ENST00000479782 NCKAP5LQ9HCH0 1330 aa19.83■□□□□ 0.77
RPP40-205ENST00000479782 HSPA2P54652 639 aa19.82■□□□□ 0.76
RPP40-205ENST00000479782 TESK2Q96S53 571 aa19.82■□□□□ 0.76
RPP40-205ENST00000479782 STK26Q9P289 416 aa19.82■□□□□ 0.76
RPP40-205ENST00000479782 XRN1Q8IZH2 1706 aaKnown RBP19.82■□□□□ 0.76
RPP40-205ENST00000479782 SIRT1Q96EB6 747 aa19.81■□□□□ 0.76
RPP40-205ENST00000479782 FAM135BQ49AJ0 1406 aa19.81■□□□□ 0.76
RPP40-205ENST00000479782 STRCQ7RTU9 1775 aa19.8■□□□□ 0.76
RPP40-205ENST00000479782 CHD2O14647 1828 aaKnown RBP19.8■□□□□ 0.76
RPP40-205ENST00000479782 PTPRUQ92729 1446 aa19.79■□□□□ 0.76
RPP40-205ENST00000479782 TMF1P82094 1093 aa19.79■□□□□ 0.76
RPP40-205ENST00000479782 PTCH1Q13635 1447 aa19.78■□□□□ 0.76
RPP40-205ENST00000479782 CCDC7Q96M83 1385 aa19.78■□□□□ 0.76
RPP40-205ENST00000479782 WASHC2AQ641Q2 1341 aa19.77■□□□□ 0.76
RPP40-205ENST00000479782 KIF7Q2M1P5 1343 aa19.76■□□□□ 0.75
RPP40-205ENST00000479782 NWD1Q149M9 1564 aa19.76■□□□□ 0.75
RPP40-205ENST00000479782 C11orf95C9JLR9 678 aaPredicted RBP19.76■□□□□ 0.75
RPP40-205ENST00000479782 PRAM1Q96QH2 718 aa19.76■□□□□ 0.75
RPP40-205ENST00000479782 POGKQ9P215 609 aa19.76■□□□□ 0.75
RPP40-205ENST00000479782 DISP3Q9P2K9 1392 aa19.75■□□□□ 0.75
RPP40-205ENST00000479782 CDCA8Q53HL2 280 aa19.75■□□□□ 0.75
RPP40-205ENST00000479782 AMOTL2Q9Y2J4 779 aa19.75■□□□□ 0.75
RPP40-205ENST00000479782 ROBO2Q9HCK4 1378 aa19.73■□□□□ 0.75
RPP40-205ENST00000479782 PLEKHH1Q9ULM0 1364 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms