RNA–Protein interactions for RNA: ENST00000479620.1

GRIK3-204, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 3

Gene GRIK3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-204ENST00000479620 ZNF335Q9H4Z2 1342 aaPredicted RBP25.15■■□□□ 1.62
GRIK3-204ENST00000479620 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.15■■□□□ 1.62
GRIK3-204ENST00000479620 CERKQ8TCT0 537 aa25.15■■□□□ 1.62
GRIK3-204ENST00000479620 KIF1BO60333 1816 aa25.11■■□□□ 1.61
GRIK3-204ENST00000479620 PLEKHG1Q9ULL1 1385 aa25.1■■□□□ 1.61
GRIK3-204ENST00000479620 TRIM26Q12899 539 aaPredicted RBP25.08■■□□□ 1.61
GRIK3-204ENST00000479620 CCDC144AA2RUR9 1427 aa25.08■■□□□ 1.61
GRIK3-204ENST00000479620 PPP1R15AO75807 674 aaPredicted RBP25.07■■□□□ 1.6
GRIK3-204ENST00000479620 ZNF326Q5BKZ1 582 aaKnown RBP25.07■■□□□ 1.6
GRIK3-204ENST00000479620 IQSEC2Q5JU85 1478 aa25.04■■□□□ 1.6
GRIK3-204ENST00000479620 CPS1P31327 1500 aa25.04■■□□□ 1.6
GRIK3-204ENST00000479620 RPGRIP1LQ68CZ1 1315 aa25.04■■□□□ 1.6
GRIK3-204ENST00000479620 NUTM2DQ5VT03 806 aaPredicted RBP25.03■■□□□ 1.6
GRIK3-204ENST00000479620 NEXMIFQ5QGS0 1516 aa25.02■■□□□ 1.6
GRIK3-204ENST00000479620 SLC26A8Q96RN1 970 aa25.02■■□□□ 1.6
GRIK3-204ENST00000479620 ANKRD30BQ9BXX2 1392 aa25.02■■□□□ 1.6
GRIK3-204ENST00000479620 BCANQ96GW7 911 aa25.01■■□□□ 1.59
GRIK3-204ENST00000479620 TBX22Q9Y458 520 aa25.01■■□□□ 1.59
GRIK3-204ENST00000479620 SPATA31E1Q6ZUB1 1445 aa25.01■■□□□ 1.59
GRIK3-204ENST00000479620 FBXO41Q8TF61 875 aa25■■□□□ 1.59
GRIK3-204ENST00000479620 ADAMTS13Q76LX8 1427 aa24.99■■□□□ 1.59
GRIK3-204ENST00000479620 STRCP1A6NGW2 1772 aa24.98■■□□□ 1.59
GRIK3-204ENST00000479620 VGFO15240 615 aaPredicted RBP24.97■■□□□ 1.59
GRIK3-204ENST00000479620 KCNA6P17658 529 aa24.96■■□□□ 1.59
GRIK3-204ENST00000479620 DIP2AQ14689 1571 aa24.96■■□□□ 1.59
GRIK3-204ENST00000479620 SETBP1Q9Y6X0 1596 aa24.95■■□□□ 1.58
GRIK3-204ENST00000479620 PIK3R4Q99570 1358 aa24.93■■□□□ 1.58
GRIK3-204ENST00000479620 RGL3Q3MIN7 710 aa24.92■■□□□ 1.58
GRIK3-204ENST00000479620 ILDR1Q86SU0 546 aaPredicted RBP24.92■■□□□ 1.58
GRIK3-204ENST00000479620 SENP3Q9H4L4 574 aaPredicted RBP24.92■■□□□ 1.58
GRIK3-204ENST00000479620 NRXN3Q9Y4C0 1643 aa24.92■■□□□ 1.58
GRIK3-204ENST00000479620 PPLO60437 1756 aa24.92■■□□□ 1.58
GRIK3-204ENST00000479620 LRRC7Q96NW7 1537 aa24.91■■□□□ 1.58
GRIK3-204ENST00000479620 NWD1Q149M9 1564 aa24.91■■□□□ 1.58
GRIK3-204ENST00000479620 CHD2O14647 1828 aaKnown RBP24.9■■□□□ 1.58
GRIK3-204ENST00000479620 NKTRP30414 1462 aaKnown RBP24.87■■□□□ 1.57
GRIK3-204ENST00000479620 IFT172Q9UG01 1749 aa24.86■■□□□ 1.57
GRIK3-204ENST00000479620 ADGRF5Q8IZF2 1346 aa24.83■■□□□ 1.56
GRIK3-204ENST00000479620 PROSER2Q86WR7 435 aaPredicted RBP24.82■■□□□ 1.56
GRIK3-204ENST00000479620 METP08581 1390 aa24.81■■□□□ 1.56
GRIK3-204ENST00000479620 PTPRUQ92729 1446 aa24.81■■□□□ 1.56
GRIK3-204ENST00000479620 ALKQ9UM73 1620 aa24.8■■□□□ 1.56
GRIK3-204ENST00000479620 AMOTL2Q9Y2J4 779 aa24.8■■□□□ 1.56
GRIK3-204ENST00000479620 TMEM94Q12767 1356 aa24.8■■□□□ 1.56
GRIK3-204ENST00000479620 XIRP1Q702N8 1843 aaKnown RBP24.79■■□□□ 1.56
GRIK3-204ENST00000479620 UBAP1LF5GYI3 381 aa24.79■■□□□ 1.56
GRIK3-204ENST00000479620 SETD1AO15047 1707 aaKnown RBP24.78■■□□□ 1.56
GRIK3-204ENST00000479620 MYOM2P54296 1465 aa24.78■■□□□ 1.56
GRIK3-204ENST00000479620 STAC3Q96MF2 364 aa24.78■■□□□ 1.56
GRIK3-204ENST00000479620 NRXN1Q9ULB1 1477 aa24.77■■□□□ 1.56
GRIK3-204ENST00000479620 TOM1O60784 492 aa24.77■■□□□ 1.56
GRIK3-204ENST00000479620 DHX57Q6P158 1386 aaKnown RBP24.77■■□□□ 1.56
GRIK3-204ENST00000479620 PIK3C2GO75747 1445 aa24.77■■□□□ 1.56
GRIK3-204ENST00000479620 NCOA3Q9Y6Q9 1424 aa24.77■■□□□ 1.56
GRIK3-204ENST00000479620 XRN1Q8IZH2 1706 aaKnown RBP24.75■■□□□ 1.55
GRIK3-204ENST00000479620 PRAG1Q86YV5 1406 aa24.71■■□□□ 1.55
GRIK3-204ENST00000479620 RBM33Q96EV2 1170 aaKnown RBP24.71■■□□□ 1.55
GRIK3-204ENST00000479620 C14orf93Q9H972 538 aaKnown RBP24.71■■□□□ 1.55
GRIK3-204ENST00000479620 DCAF11Q8TEB1 546 aa24.7■■□□□ 1.54
GRIK3-204ENST00000479620 MSH6P52701 1360 aa24.67■■□□□ 1.54
GRIK3-204ENST00000479620 PTCH1Q13635 1447 aa24.66■■□□□ 1.54
GRIK3-204ENST00000479620 C19orf44Q9H6X5 657 aa24.65■■□□□ 1.54
GRIK3-204ENST00000479620 KDM2AQ9Y2K7 1162 aa24.65■■□□□ 1.54
GRIK3-204ENST00000479620 LAMC1P11047 1609 aa24.64■■□□□ 1.54
GRIK3-204ENST00000479620 CFAP70Q5T0N1 1121 aa24.64■■□□□ 1.54
GRIK3-204ENST00000479620 SIN3AQ96ST3 1273 aa24.64■■□□□ 1.54
GRIK3-204ENST00000479620 PCGF6Q9BYE7 350 aa24.64■■□□□ 1.54
GRIK3-204ENST00000479620 LRPPRCP42704 1394 aaKnown RBP24.63■■□□□ 1.53
GRIK3-204ENST00000479620 ASXL1Q8IXJ9 1541 aa24.62■■□□□ 1.53
GRIK3-204ENST00000479620 TMEM132EQ6IEE7 984 aa24.62■■□□□ 1.53
GRIK3-204ENST00000479620 ABCC11Q96J66 1382 aa24.62■■□□□ 1.53
GRIK3-204ENST00000479620 ROBO2Q9HCK4 1378 aa24.62■■□□□ 1.53
GRIK3-204ENST00000479620 TECPR2O15040 1411 aa24.61■■□□□ 1.53
GRIK3-204ENST00000479620 PIP4K2BP78356 416 aa24.61■■□□□ 1.53
GRIK3-204ENST00000479620 C14orf37Q86TY3 774 aa24.61■■□□□ 1.53
GRIK3-204ENST00000479620 YTHDC2Q9H6S0 1430 aaKnown RBP24.59■■□□□ 1.53
GRIK3-204ENST00000479620 SIRT1Q96EB6 747 aa24.58■■□□□ 1.53
GRIK3-204ENST00000479620 DCCP43146 1447 aa24.58■■□□□ 1.53
GRIK3-204ENST00000479620 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.58■■□□□ 1.52
GRIK3-204ENST00000479620 CADPS2Q86UW7 1296 aa24.57■■□□□ 1.52
GRIK3-204ENST00000479620 L3MBTL2Q969R5 705 aa24.57■■□□□ 1.52
GRIK3-204ENST00000479620 FAM135BQ49AJ0 1406 aa24.57■■□□□ 1.52
GRIK3-204ENST00000479620 SCAF1Q9H7N4 1312 aaKnown RBP24.57■■□□□ 1.52
GRIK3-204ENST00000479620 KNDC1Q76NI1 1749 aa24.56■■□□□ 1.52
GRIK3-204ENST00000479620 ADGRL3Q9HAR2 1447 aa24.56■■□□□ 1.52
GRIK3-204ENST00000479620 NEUROD1Q13562 356 aa24.56■■□□□ 1.52
GRIK3-204ENST00000479620 SLAIN2Q9P270 581 aa24.56■■□□□ 1.52
GRIK3-204ENST00000479620 STK26Q9P289 416 aa24.56■■□□□ 1.52
GRIK3-204ENST00000479620 ATF3P18847 181 aa24.55■■□□□ 1.52
GRIK3-204ENST00000479620 ADGRB1O14514 1584 aa24.54■■□□□ 1.52
GRIK3-204ENST00000479620 NALCNQ8IZF0 1738 aa24.51■■□□□ 1.51
GRIK3-204ENST00000479620 KIAA1210Q9ULL0 1709 aa24.49■■□□□ 1.51
GRIK3-204ENST00000479620 HSPA1LP34931 641 aa24.49■■□□□ 1.51
GRIK3-204ENST00000479620 WAPLQ7Z5K2 1190 aa24.49■■□□□ 1.51
GRIK3-204ENST00000479620 DLC1Q96QB1 1528 aa24.48■■□□□ 1.51
GRIK3-204ENST00000479620 ROBO1Q9Y6N7 1651 aa24.46■■□□□ 1.51
GRIK3-204ENST00000479620 MST1RQ04912 1400 aa24.45■■□□□ 1.51
GRIK3-204ENST00000479620 PLEKHH1Q9ULM0 1364 aa24.45■■□□□ 1.5
GRIK3-204ENST00000479620 CLSPNQ9HAW4 1339 aa24.44■■□□□ 1.5
GRIK3-204ENST00000479620 PRAM1Q96QH2 718 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms