RNA–Protein interactions for RNA: ENST00000479424.5

ITSN1-228, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-228ENST00000479424 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
ITSN1-228ENST00000479424 ROBO1Q9Y6N7 1651 aa13.38□□□□□ -0.27
ITSN1-228ENST00000479424 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
ITSN1-228ENST00000479424 UNC13BO14795 1591 aa13.37□□□□□ -0.27
ITSN1-228ENST00000479424 FAM50AQ14320 339 aaKnown RBP13.37□□□□□ -0.27
ITSN1-228ENST00000479424 PHF23Q9BUL5 403 aaPredicted RBP13.37□□□□□ -0.27
ITSN1-228ENST00000479424 SLC52A1Q9NWF4 448 aa13.37□□□□□ -0.27
ITSN1-228ENST00000479424 E9PCH4 1651 aa13.37□□□□□ -0.27
ITSN1-228ENST00000479424 NKTRP30414 1462 aaKnown RBP13.36□□□□□ -0.27
ITSN1-228ENST00000479424 PROSER2Q86WR7 435 aaPredicted RBP13.34□□□□□ -0.27
ITSN1-228ENST00000479424 PLEKHG1Q9ULL1 1385 aa13.33□□□□□ -0.27
ITSN1-228ENST00000479424 IQGAP3Q86VI3 1631 aa13.32□□□□□ -0.28
ITSN1-228ENST00000479424 RIMS2Q9UQ26 1411 aa13.32□□□□□ -0.28
ITSN1-228ENST00000479424 PHLPP1O60346 1717 aa13.31□□□□□ -0.28
ITSN1-228ENST00000479424 ADAMTS13Q76LX8 1427 aa13.3□□□□□ -0.28
ITSN1-228ENST00000479424 ROCK1Q13464 1354 aa13.3□□□□□ -0.28
ITSN1-228ENST00000479424 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.28□□□□□ -0.28
ITSN1-228ENST00000479424 POTEAQ6S8J7 498 aa13.28□□□□□ -0.28
ITSN1-228ENST00000479424 TBX22Q9Y458 520 aa13.28□□□□□ -0.28
ITSN1-228ENST00000479424 MSH6P52701 1360 aa13.28□□□□□ -0.28
ITSN1-228ENST00000479424 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.29
ITSN1-228ENST00000479424 BCANQ96GW7 911 aa13.27□□□□□ -0.29
ITSN1-228ENST00000479424 SLAIN2Q9P270 581 aa13.27□□□□□ -0.29
ITSN1-228ENST00000479424 COL16A1Q07092 1604 aaPredicted RBP13.27□□□□□ -0.29
ITSN1-228ENST00000479424 DIP2AQ14689 1571 aa13.26□□□□□ -0.29
ITSN1-228ENST00000479424 NRXN3Q9Y4C0 1643 aa13.25□□□□□ -0.29
ITSN1-228ENST00000479424 NCOA3Q9Y6Q9 1424 aa13.25□□□□□ -0.29
ITSN1-228ENST00000479424 PPP1R15AO75807 674 aaPredicted RBP13.25□□□□□ -0.29
ITSN1-228ENST00000479424 SPHKAPQ2M3C7 1700 aa13.25□□□□□ -0.29
ITSN1-228ENST00000479424 PTPRUQ92729 1446 aa13.24□□□□□ -0.29
ITSN1-228ENST00000479424 CHGAP10645 457 aaKnown RBP13.24□□□□□ -0.29
ITSN1-228ENST00000479424 HDGFP51858 240 aaKnown RBP13.24□□□□□ -0.29
ITSN1-228ENST00000479424 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
ITSN1-228ENST00000479424 NUP155O75694 1391 aa13.22□□□□□ -0.29
ITSN1-228ENST00000479424 PIK3R4Q99570 1358 aa13.22□□□□□ -0.29
ITSN1-228ENST00000479424 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
ITSN1-228ENST00000479424 XRN1Q8IZH2 1706 aaKnown RBP13.22□□□□□ -0.29
ITSN1-228ENST00000479424 JCADQ9P266 1359 aa13.21□□□□□ -0.29
ITSN1-228ENST00000479424 AHDC1Q5TGY3 1603 aaPredicted RBP13.21□□□□□ -0.29
ITSN1-228ENST00000479424 TRPM2O94759 1503 aa13.21□□□□□ -0.29
ITSN1-228ENST00000479424 LRP6O75581 1613 aa13.21□□□□□ -0.3
ITSN1-228ENST00000479424 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
ITSN1-228ENST00000479424 SHPRHQ149N8 1683 aa13.2□□□□□ -0.3
ITSN1-228ENST00000479424 ITGAEP38570 1179 aa13.19□□□□□ -0.3
ITSN1-228ENST00000479424 PPARGC1BQ86YN6 1023 aaKnown RBP13.19□□□□□ -0.3
ITSN1-228ENST00000479424 C19orf44Q9H6X5 657 aa13.19□□□□□ -0.3
ITSN1-228ENST00000479424 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
ITSN1-228ENST00000479424 CLTCL1P53675 1640 aa13.18□□□□□ -0.3
ITSN1-228ENST00000479424 CADPS2Q86UW7 1296 aa13.17□□□□□ -0.3
ITSN1-228ENST00000479424 KIF1BO60333 1816 aa13.16□□□□□ -0.3
ITSN1-228ENST00000479424 C14orf37Q86TY3 774 aa13.16□□□□□ -0.3
ITSN1-228ENST00000479424 METP08581 1390 aa13.16□□□□□ -0.3
ITSN1-228ENST00000479424 NEXMIFQ5QGS0 1516 aa13.15□□□□□ -0.3
ITSN1-228ENST00000479424 NHSL1Q5SYE7 1610 aa13.15□□□□□ -0.3
ITSN1-228ENST00000479424 ATF3P18847 181 aa13.15□□□□□ -0.3
ITSN1-228ENST00000479424 BRINP3Q76B58 766 aa13.15□□□□□ -0.3
ITSN1-228ENST00000479424 SPATA31A6Q5VVP1 1343 aa13.14□□□□□ -0.31
ITSN1-228ENST00000479424 DCCP43146 1447 aa13.14□□□□□ -0.31
ITSN1-228ENST00000479424 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
ITSN1-228ENST00000479424 MST1RQ04912 1400 aa13.13□□□□□ -0.31
ITSN1-228ENST00000479424 ASXL1Q8IXJ9 1541 aa13.13□□□□□ -0.31
ITSN1-228ENST00000479424 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
ITSN1-228ENST00000479424 NAIPQ13075 1403 aa13.12□□□□□ -0.31
ITSN1-228ENST00000479424 ZNF326Q5BKZ1 582 aaKnown RBP13.1□□□□□ -0.31
ITSN1-228ENST00000479424 SETD5Q9C0A6 1442 aa13.1□□□□□ -0.31
ITSN1-228ENST00000479424 ADGRL3Q9HAR2 1447 aa13.09□□□□□ -0.31
ITSN1-228ENST00000479424 PPLO60437 1756 aa13.08□□□□□ -0.32
ITSN1-228ENST00000479424 DDX17Q92841 729 aaKnown RBP13.08□□□□□ -0.32
ITSN1-228ENST00000479424 LAMC1P11047 1609 aa13.07□□□□□ -0.32
ITSN1-228ENST00000479424 MEX3CQ5U5Q3 659 aaKnown RBP13.07□□□□□ -0.32
ITSN1-228ENST00000479424 ZNF772Q68DY9 489 aaPredicted RBP13.07□□□□□ -0.32
ITSN1-228ENST00000479424 NUTM2BA6NNL0 878 aaPredicted RBP13.05□□□□□ -0.32
ITSN1-228ENST00000479424 NUTM2EB1AL46 878 aaPredicted RBP13.05□□□□□ -0.32
ITSN1-228ENST00000479424 NUTM2AQ8IVF1 878 aaPredicted RBP13.05□□□□□ -0.32
ITSN1-228ENST00000479424 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.32
ITSN1-228ENST00000479424 TRIM52Q96A61 297 aa13.04□□□□□ -0.32
ITSN1-228ENST00000479424 PNPLA6Q8IY17 1366 aa13.04□□□□□ -0.32
ITSN1-228ENST00000479424 ROBO2Q9HCK4 1378 aa13.04□□□□□ -0.32
ITSN1-228ENST00000479424 HFM1A2PYH4 1435 aa13.04□□□□□ -0.32
ITSN1-228ENST00000479424 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
ITSN1-228ENST00000479424 PRAG1Q86YV5 1406 aa13.04□□□□□ -0.32
ITSN1-228ENST00000479424 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
ITSN1-228ENST00000479424 LRRC59Q96AG4 307 aaKnown RBP13.02□□□□□ -0.33
ITSN1-228ENST00000479424 AFF2P51816 1311 aa13.02□□□□□ -0.33
ITSN1-228ENST00000479424 CDK12Q9NYV4 1490 aaPredicted RBP13.02□□□□□ -0.33
ITSN1-228ENST00000479424 RXRBP28702 533 aa13.01□□□□□ -0.33
ITSN1-228ENST00000479424 EP400Q96L91 3159 aa13.01□□□□□ -0.33
ITSN1-228ENST00000479424 SRCAPQ6ZRS2 3230 aa13□□□□□ -0.33
ITSN1-228ENST00000479424 IFT172Q9UG01 1749 aa13□□□□□ -0.33
ITSN1-228ENST00000479424 VGFO15240 615 aaPredicted RBP13□□□□□ -0.33
ITSN1-228ENST00000479424 SOS2Q07890 1332 aaPredicted RBP12.99□□□□□ -0.33
ITSN1-228ENST00000479424 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
ITSN1-228ENST00000479424 ORAI2Q96SN7 254 aa12.99□□□□□ -0.33
ITSN1-228ENST00000479424 FOXD1Q16676 465 aa12.98□□□□□ -0.33
ITSN1-228ENST00000479424 C8orf37Q96NL8 207 aa12.98□□□□□ -0.33
ITSN1-228ENST00000479424 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
ITSN1-228ENST00000479424 COL22A1Q8NFW1 1626 aaPredicted RBP12.98□□□□□ -0.33
ITSN1-228ENST00000479424 RGS12O14924 1447 aa12.97□□□□□ -0.33
ITSN1-228ENST00000479424 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
ITSN1-228ENST00000479424 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms