RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 RIMS2Q9UQ26 1411 aa36.68■■■■□ 3.46
PERM1-203ENST00000479361 ZNF326Q5BKZ1 582 aaKnown RBP36.67■■■■□ 3.46
PERM1-203ENST00000479361 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.66■■■■□ 3.46
PERM1-203ENST00000479361 ZFYVE9O95405 1425 aa36.66■■■■□ 3.46
PERM1-203ENST00000479361 NPHP4O75161 1426 aaPredicted RBP36.65■■■■□ 3.46
PERM1-203ENST00000479361 PPP1R15AO75807 674 aaPredicted RBP36.62■■■■□ 3.45
PERM1-203ENST00000479361 IQGAP1P46940 1657 aa36.58■■■■□ 3.45
PERM1-203ENST00000479361 RPGRIP1LQ68CZ1 1315 aa36.56■■■■□ 3.44
PERM1-203ENST00000479361 SPATA31E1Q6ZUB1 1445 aa36.55■■■■□ 3.44
PERM1-203ENST00000479361 DHX57Q6P158 1386 aaKnown RBP36.54■■■■□ 3.44
PERM1-203ENST00000479361 PLEKHG1Q9ULL1 1385 aa36.53■■■■□ 3.44
PERM1-203ENST00000479361 NUTM2DQ5VT03 806 aaPredicted RBP36.51■■■■□ 3.44
PERM1-203ENST00000479361 BCANQ96GW7 911 aa36.51■■■■□ 3.44
PERM1-203ENST00000479361 NEXMIFQ5QGS0 1516 aa36.5■■■■□ 3.43
PERM1-203ENST00000479361 RGL3Q3MIN7 710 aa36.5■■■■□ 3.43
PERM1-203ENST00000479361 VGFO15240 615 aaPredicted RBP36.46■■■■□ 3.43
PERM1-203ENST00000479361 SLC26A8Q96RN1 970 aa36.4■■■■□ 3.42
PERM1-203ENST00000479361 PPLO60437 1756 aa36.39■■■■□ 3.42
PERM1-203ENST00000479361 ZNF335Q9H4Z2 1342 aaPredicted RBP36.38■■■■□ 3.41
PERM1-203ENST00000479361 SENP3Q9H4L4 574 aaPredicted RBP36.38■■■■□ 3.41
PERM1-203ENST00000479361 TBX22Q9Y458 520 aa36.35■■■■□ 3.41
PERM1-203ENST00000479361 SETBP1Q9Y6X0 1596 aa36.35■■■■□ 3.41
PERM1-203ENST00000479361 DIP2AQ14689 1571 aa36.33■■■■□ 3.41
PERM1-203ENST00000479361 ADAMTS13Q76LX8 1427 aa36.33■■■■□ 3.41
PERM1-203ENST00000479361 IFT172Q9UG01 1749 aa36.32■■■■□ 3.4
PERM1-203ENST00000479361 LTBP4Q8N2S1 1624 aa36.28■■■■□ 3.4
PERM1-203ENST00000479361 STAC3Q96MF2 364 aa36.27■■■■□ 3.4
PERM1-203ENST00000479361 ADGRF5Q8IZF2 1346 aa36.27■■■■□ 3.4
PERM1-203ENST00000479361 NRXN3Q9Y4C0 1643 aa36.26■■■■□ 3.4
PERM1-203ENST00000479361 MYOM2P54296 1465 aa36.26■■■■□ 3.4
PERM1-203ENST00000479361 SIN3AQ96ST3 1273 aa36.26■■■■□ 3.4
PERM1-203ENST00000479361 CPS1P31327 1500 aa36.24■■■■□ 3.39
PERM1-203ENST00000479361 DCAF11Q8TEB1 546 aa36.24■■■■□ 3.39
PERM1-203ENST00000479361 PIK3R4Q99570 1358 aa36.24■■■■□ 3.39
PERM1-203ENST00000479361 NEUROD1Q13562 356 aa36.23■■■■□ 3.39
PERM1-203ENST00000479361 KCNA6P17658 529 aa36.22■■■■□ 3.39
PERM1-203ENST00000479361 PIK3C2GO75747 1445 aa36.19■■■■□ 3.38
PERM1-203ENST00000479361 CERKQ8TCT0 537 aa36.19■■■■□ 3.38
PERM1-203ENST00000479361 KDM2AQ9Y2K7 1162 aa36.18■■■■□ 3.38
PERM1-203ENST00000479361 NRXN1Q9ULB1 1477 aa36.18■■■■□ 3.38
PERM1-203ENST00000479361 ALKQ9UM73 1620 aa36.17■■■■□ 3.38
PERM1-203ENST00000479361 NWD1Q149M9 1564 aa36.15■■■■□ 3.38
PERM1-203ENST00000479361 CLSPNQ9HAW4 1339 aa36.14■■■■□ 3.38
PERM1-203ENST00000479361 STRCP1A6NGW2 1772 aa36.14■■■■□ 3.38
PERM1-203ENST00000479361 METP08581 1390 aa36.14■■■■□ 3.38
PERM1-203ENST00000479361 CHD2O14647 1828 aaKnown RBP36.13■■■■□ 3.37
PERM1-203ENST00000479361 NKTRP30414 1462 aaKnown RBP36.11■■■■□ 3.37
PERM1-203ENST00000479361 L3MBTL2Q969R5 705 aa36.09■■■■□ 3.37
PERM1-203ENST00000479361 IQSEC2Q5JU85 1478 aa36.09■■■■□ 3.37
PERM1-203ENST00000479361 SETD1AO15047 1707 aaKnown RBP36.08■■■■□ 3.37
PERM1-203ENST00000479361 CCER1Q8TC90 406 aaPredicted RBP36.08■■■■□ 3.37
PERM1-203ENST00000479361 AMOTL2Q9Y2J4 779 aa36.08■■■■□ 3.37
PERM1-203ENST00000479361 C14orf93Q9H972 538 aaKnown RBP36.07■■■■□ 3.36
PERM1-203ENST00000479361 LRRC7Q96NW7 1537 aa36.07■■■■□ 3.36
PERM1-203ENST00000479361 PTPRUQ92729 1446 aa36.06■■■■□ 3.36
PERM1-203ENST00000479361 LAMC1P11047 1609 aa36.05■■■■□ 3.36
PERM1-203ENST00000479361 PROSER2Q86WR7 435 aaPredicted RBP36.05■■■■□ 3.36
PERM1-203ENST00000479361 TONSLQ96HA7 1378 aa36.03■■■■□ 3.36
PERM1-203ENST00000479361 CFAP70Q5T0N1 1121 aa36.02■■■■□ 3.36
PERM1-203ENST00000479361 XRN1Q8IZH2 1706 aaKnown RBP36■■■■□ 3.35
PERM1-203ENST00000479361 TMEM94Q12767 1356 aa35.98■■■■□ 3.35
PERM1-203ENST00000479361 PRAG1Q86YV5 1406 aa35.97■■■■□ 3.35
PERM1-203ENST00000479361 TMEM132EQ6IEE7 984 aa35.96■■■■□ 3.35
PERM1-203ENST00000479361 ASXL1Q8IXJ9 1541 aa35.93■■■■□ 3.34
PERM1-203ENST00000479361 LRPPRCP42704 1394 aaKnown RBP35.93■■■■□ 3.34
PERM1-203ENST00000479361 NCOA3Q9Y6Q9 1424 aa35.92■■■■□ 3.34
PERM1-203ENST00000479361 PTCH1Q13635 1447 aa35.91■■■■□ 3.34
PERM1-203ENST00000479361 RBM33Q96EV2 1170 aaKnown RBP35.9■■■■□ 3.34
PERM1-203ENST00000479361 YTHDC2Q9H6S0 1430 aaKnown RBP35.9■■■■□ 3.34
PERM1-203ENST00000479361 ABCC11Q96J66 1382 aa35.89■■■■□ 3.34
PERM1-203ENST00000479361 STK26Q9P289 416 aa35.89■■■■□ 3.34
PERM1-203ENST00000479361 TECPR2O15040 1411 aa35.87■■■■□ 3.33
PERM1-203ENST00000479361 KIAA1210Q9ULL0 1709 aa35.86■■■■□ 3.33
PERM1-203ENST00000479361 XIRP1Q702N8 1843 aaKnown RBP35.86■■■■□ 3.33
PERM1-203ENST00000479361 C14orf37Q86TY3 774 aa35.86■■■■□ 3.33
PERM1-203ENST00000479361 ADGRB1O14514 1584 aa35.85■■■■□ 3.33
PERM1-203ENST00000479361 TIMELESSQ9UNS1 1208 aa35.85■■■■□ 3.33
PERM1-203ENST00000479361 ROBO2Q9HCK4 1378 aa35.85■■■■□ 3.33
PERM1-203ENST00000479361 MSH6P52701 1360 aa35.84■■■■□ 3.33
PERM1-203ENST00000479361 FBXO41Q8TF61 875 aa35.82■■■■□ 3.32
PERM1-203ENST00000479361 KNDC1Q76NI1 1749 aa35.82■■■■□ 3.32
PERM1-203ENST00000479361 UBAP1LF5GYI3 381 aa35.81■■■■□ 3.32
PERM1-203ENST00000479361 TOM1O60784 492 aa35.81■■■■□ 3.32
PERM1-203ENST00000479361 SIRT1Q96EB6 747 aa35.79■■■■□ 3.32
PERM1-203ENST00000479361 C19orf44Q9H6X5 657 aa35.79■■■■□ 3.32
PERM1-203ENST00000479361 FAM135BQ49AJ0 1406 aa35.76■■■■□ 3.32
PERM1-203ENST00000479361 NBPF1Q3BBV0 1214 aa35.75■■■■□ 3.31
PERM1-203ENST00000479361 DLC1Q96QB1 1528 aa35.74■■■■□ 3.31
PERM1-203ENST00000479361 TRAK1Q9UPV9 953 aa35.74■■■■□ 3.31
PERM1-203ENST00000479361 ADGRL3Q9HAR2 1447 aa35.74■■■■□ 3.31
PERM1-203ENST00000479361 NBPF8Q3BBV2 869 aa35.73■■■■□ 3.31
PERM1-203ENST00000479361 TRPM1Q7Z4N2 1603 aa35.72■■■■□ 3.31
PERM1-203ENST00000479361 ATF3P18847 181 aa35.71■■■■□ 3.31
PERM1-203ENST00000479361 WAPLQ7Z5K2 1190 aa35.71■■■■□ 3.31
PERM1-203ENST00000479361 ROCK2O75116 1388 aaKnown RBP35.7■■■■□ 3.31
PERM1-203ENST00000479361 DCCP43146 1447 aa35.7■■■■□ 3.31
PERM1-203ENST00000479361 CADPS2Q86UW7 1296 aa35.7■■■■□ 3.31
PERM1-203ENST00000479361 PRAM1Q96QH2 718 aa35.68■■■■□ 3.3
PERM1-203ENST00000479361 POGKQ9P215 609 aa35.68■■■■□ 3.3
PERM1-203ENST00000479361 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms