RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 PIK3C2BO00750 1634 aa22.37■■□□□ 1.17
COL16A1-211ENST00000479100 ILDR2Q71H61 639 aa22.34■■□□□ 1.17
COL16A1-211ENST00000479100 EID1Q9Y6B2 187 aa22.34■■□□□ 1.17
COL16A1-211ENST00000479100 TRPM2O94759 1503 aa22.34■■□□□ 1.17
COL16A1-211ENST00000479100 LRRC7Q96NW7 1537 aa22.34■■□□□ 1.17
COL16A1-211ENST00000479100 ALKQ9UM73 1620 aa22.33■■□□□ 1.17
COL16A1-211ENST00000479100 ADGRB3O60242 1522 aa22.31■■□□□ 1.16
COL16A1-211ENST00000479100 HSPA1LP34931 641 aa22.31■■□□□ 1.16
COL16A1-211ENST00000479100 PIP4K2BP78356 416 aa22.31■■□□□ 1.16
COL16A1-211ENST00000479100 CLTCL1P53675 1640 aa22.3■■□□□ 1.16
COL16A1-211ENST00000479100 STRCP1A6NGW2 1772 aa22.3■■□□□ 1.16
COL16A1-211ENST00000479100 CCDC144AA2RUR9 1427 aa22.29■■□□□ 1.16
COL16A1-211ENST00000479100 ZNF326Q5BKZ1 582 aaKnown RBP22.28■■□□□ 1.16
COL16A1-211ENST00000479100 KDM5AP29375 1690 aaKnown RBP22.26■■□□□ 1.15
COL16A1-211ENST00000479100 TMEM131LA2VDJ0 1609 aa22.26■■□□□ 1.15
COL16A1-211ENST00000479100 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
COL16A1-211ENST00000479100 ANKRD30BQ9BXX2 1392 aa22.25■■□□□ 1.15
COL16A1-211ENST00000479100 MYO5BQ9ULV0 1848 aa22.23■■□□□ 1.15
COL16A1-211ENST00000479100 PPP1R15AO75807 674 aaPredicted RBP22.23■■□□□ 1.15
COL16A1-211ENST00000479100 NUTM2DQ5VT03 806 aaPredicted RBP22.23■■□□□ 1.15
COL16A1-211ENST00000479100 HDGFP51858 240 aaKnown RBP22.22■■□□□ 1.15
COL16A1-211ENST00000479100 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
COL16A1-211ENST00000479100 RIMS2Q9UQ26 1411 aa22.22■■□□□ 1.15
COL16A1-211ENST00000479100 KCNA6P17658 529 aa22.21■■□□□ 1.15
COL16A1-211ENST00000479100 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
COL16A1-211ENST00000479100 SLC26A8Q96RN1 970 aa22.21■■□□□ 1.15
COL16A1-211ENST00000479100 KIF1BO60333 1816 aa22.21■■□□□ 1.15
COL16A1-211ENST00000479100 DHX57Q6P158 1386 aaKnown RBP22.21■■□□□ 1.15
COL16A1-211ENST00000479100 ZFYVE9O95405 1425 aa22.21■■□□□ 1.15
COL16A1-211ENST00000479100 BCANQ96GW7 911 aa22.2■■□□□ 1.14
COL16A1-211ENST00000479100 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.19■■□□□ 1.14
COL16A1-211ENST00000479100 SOCS7O14512 581 aa22.16■■□□□ 1.14
COL16A1-211ENST00000479100 TMEM94Q12767 1356 aa22.15■■□□□ 1.14
COL16A1-211ENST00000479100 PLEKHG1Q9ULL1 1385 aa22.14■■□□□ 1.14
COL16A1-211ENST00000479100 SPATA31E1Q6ZUB1 1445 aa22.13■■□□□ 1.13
COL16A1-211ENST00000479100 RPGRIP1LQ68CZ1 1315 aa22.12■■□□□ 1.13
COL16A1-211ENST00000479100 SIN3AQ96ST3 1273 aa22.11■■□□□ 1.13
COL16A1-211ENST00000479100 NEUROD1Q13562 356 aa22.1■■□□□ 1.13
COL16A1-211ENST00000479100 VGFO15240 615 aaPredicted RBP22.09■■□□□ 1.13
COL16A1-211ENST00000479100 PROSER2Q86WR7 435 aaPredicted RBP22.09■■□□□ 1.13
COL16A1-211ENST00000479100 RBM33Q96EV2 1170 aaKnown RBP22.09■■□□□ 1.13
COL16A1-211ENST00000479100 TBX22Q9Y458 520 aa22.09■■□□□ 1.13
COL16A1-211ENST00000479100 NEXMIFQ5QGS0 1516 aa22.09■■□□□ 1.13
COL16A1-211ENST00000479100 NKTRP30414 1462 aaKnown RBP22.08■■□□□ 1.12
COL16A1-211ENST00000479100 NWD1Q149M9 1564 aa22.08■■□□□ 1.12
COL16A1-211ENST00000479100 FAM135BQ49AJ0 1406 aa22.07■■□□□ 1.12
COL16A1-211ENST00000479100 XIRP1Q702N8 1843 aaKnown RBP22.07■■□□□ 1.12
COL16A1-211ENST00000479100 MED1Q15648 1581 aaPredicted RBP22.07■■□□□ 1.12
COL16A1-211ENST00000479100 ADAMTS13Q76LX8 1427 aa22.06■■□□□ 1.12
COL16A1-211ENST00000479100 KDM2AQ9Y2K7 1162 aa22.04■■□□□ 1.12
COL16A1-211ENST00000479100 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
COL16A1-211ENST00000479100 DCAF11Q8TEB1 546 aa22.02■■□□□ 1.12
COL16A1-211ENST00000479100 ADGRF5Q8IZF2 1346 aa22.02■■□□□ 1.12
COL16A1-211ENST00000479100 PPLO60437 1756 aa22.02■■□□□ 1.11
COL16A1-211ENST00000479100 PIK3R4Q99570 1358 aa21.99■■□□□ 1.11
COL16A1-211ENST00000479100 MSH6P52701 1360 aa21.98■■□□□ 1.11
COL16A1-211ENST00000479100 IFT172Q9UG01 1749 aa21.97■■□□□ 1.11
COL16A1-211ENST00000479100 NCOA3Q9Y6Q9 1424 aa21.97■■□□□ 1.11
COL16A1-211ENST00000479100 SETBP1Q9Y6X0 1596 aa21.95■■□□□ 1.11
COL16A1-211ENST00000479100 SLAIN2Q9P270 581 aa21.95■■□□□ 1.1
COL16A1-211ENST00000479100 L3MBTL2Q969R5 705 aa21.94■■□□□ 1.1
COL16A1-211ENST00000479100 CHD2O14647 1828 aaKnown RBP21.94■■□□□ 1.1
COL16A1-211ENST00000479100 MYOM2P54296 1465 aa21.93■■□□□ 1.1
COL16A1-211ENST00000479100 DIP2AQ14689 1571 aa21.93■■□□□ 1.1
COL16A1-211ENST00000479100 PTPRUQ92729 1446 aa21.93■■□□□ 1.1
COL16A1-211ENST00000479100 NRXN3Q9Y4C0 1643 aa21.93■■□□□ 1.1
COL16A1-211ENST00000479100 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
COL16A1-211ENST00000479100 STAC3Q96MF2 364 aa21.91■■□□□ 1.1
COL16A1-211ENST00000479100 PHF23Q9BUL5 403 aaPredicted RBP21.91■■□□□ 1.1
COL16A1-211ENST00000479100 RGS17Q9UGC6 210 aaPredicted RBP21.91■■□□□ 1.1
COL16A1-211ENST00000479100 AMOTL2Q9Y2J4 779 aa21.91■■□□□ 1.1
COL16A1-211ENST00000479100 METP08581 1390 aa21.9■■□□□ 1.1
COL16A1-211ENST00000479100 PIK3C2GO75747 1445 aa21.89■■□□□ 1.1
COL16A1-211ENST00000479100 CLSPNQ9HAW4 1339 aa21.89■■□□□ 1.1
COL16A1-211ENST00000479100 CFAP70Q5T0N1 1121 aa21.89■■□□□ 1.09
COL16A1-211ENST00000479100 C19orf44Q9H6X5 657 aa21.89■■□□□ 1.09
COL16A1-211ENST00000479100 ROBO1Q9Y6N7 1651 aa21.88■■□□□ 1.09
COL16A1-211ENST00000479100 NRXN1Q9ULB1 1477 aa21.88■■□□□ 1.09
COL16A1-211ENST00000479100 TMEM132EQ6IEE7 984 aa21.86■■□□□ 1.09
COL16A1-211ENST00000479100 C14orf93Q9H972 538 aaKnown RBP21.86■■□□□ 1.09
COL16A1-211ENST00000479100 CADPS2Q86UW7 1296 aa21.85■■□□□ 1.09
COL16A1-211ENST00000479100 STK26Q9P289 416 aa21.84■■□□□ 1.09
COL16A1-211ENST00000479100 C14orf37Q86TY3 774 aa21.83■■□□□ 1.09
COL16A1-211ENST00000479100 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
COL16A1-211ENST00000479100 SETD1AO15047 1707 aaKnown RBP21.8■■□□□ 1.08
COL16A1-211ENST00000479100 ATF3P18847 181 aa21.8■■□□□ 1.08
COL16A1-211ENST00000479100 XRN1Q8IZH2 1706 aaKnown RBP21.78■■□□□ 1.08
COL16A1-211ENST00000479100 JCADQ9P266 1359 aa21.78■■□□□ 1.08
COL16A1-211ENST00000479100 LAMC1P11047 1609 aa21.78■■□□□ 1.08
COL16A1-211ENST00000479100 DCCP43146 1447 aa21.77■■□□□ 1.08
COL16A1-211ENST00000479100 LRPPRCP42704 1394 aaKnown RBP21.76■■□□□ 1.07
COL16A1-211ENST00000479100 ASXL1Q8IXJ9 1541 aa21.76■■□□□ 1.07
COL16A1-211ENST00000479100 BRINP3Q76B58 766 aa21.76■■□□□ 1.07
COL16A1-211ENST00000479100 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.76■■□□□ 1.07
COL16A1-211ENST00000479100 YTHDC2Q9H6S0 1430 aaKnown RBP21.75■■□□□ 1.07
COL16A1-211ENST00000479100 NBPF1Q3BBV0 1214 aa21.74■■□□□ 1.07
COL16A1-211ENST00000479100 NBPF8Q3BBV2 869 aa21.74■■□□□ 1.07
COL16A1-211ENST00000479100 POTEAQ6S8J7 498 aa21.74■■□□□ 1.07
COL16A1-211ENST00000479100 COL16A1Q07092 1604 aaPredicted RBP21.73■■□□□ 1.07
COL16A1-211ENST00000479100 ROBO2Q9HCK4 1378 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms