RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, human

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XRCC6-208	ENST00000478914	HDGF	P51858	240 aa	Known RBP	13.26	□□□□□ -0.29
XRCC6-208	ENST00000478914	SPHKAP	Q2M3C7	1700 aa		13.26	□□□□□ -0.29
XRCC6-208	ENST00000478914	RRBP1	Q9P2E9	1410 aa	Known RBP	13.26	□□□□□ -0.29
XRCC6-208	ENST00000478914	PPP1R15A	O75807	674 aa	Predicted RBP	13.25	□□□□□ -0.29
XRCC6-208	ENST00000478914	RIMS2	Q9UQ26	1411 aa		13.23	□□□□□ -0.29
XRCC6-208	ENST00000478914	SLC26A8	Q96RN1	970 aa		13.23	□□□□□ -0.29
XRCC6-208	ENST00000478914	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
XRCC6-208	ENST00000478914	CHD2	O14647	1828 aa	Known RBP	13.22	□□□□□ -0.29
XRCC6-208	ENST00000478914	ZFYVE9	O95405	1425 aa		13.22	□□□□□ -0.29
XRCC6-208	ENST00000478914	ALK	Q9UM73	1620 aa		13.21	□□□□□ -0.29
XRCC6-208	ENST00000478914	KCNA6	P17658	529 aa		13.21	□□□□□ -0.29
XRCC6-208	ENST00000478914	HSPA1L	P34931	641 aa		13.21	□□□□□ -0.29
XRCC6-208	ENST00000478914	PLEKHG1	Q9ULL1	1385 aa		13.2	□□□□□ -0.3
XRCC6-208	ENST00000478914	NWD1	Q149M9	1564 aa		13.2	□□□□□ -0.3
XRCC6-208	ENST00000478914	NKTR	P30414	1462 aa	Known RBP	13.2	□□□□□ -0.3
XRCC6-208	ENST00000478914	KIF1B	O60333	1816 aa		13.2	□□□□□ -0.3
XRCC6-208	ENST00000478914	PROSER2	Q86WR7	435 aa	Predicted RBP	13.19	□□□□□ -0.3
XRCC6-208	ENST00000478914	SENP3	Q9H4L4	574 aa	Predicted RBP	13.19	□□□□□ -0.3
XRCC6-208	ENST00000478914	DIP2A	Q14689	1571 aa		13.19	□□□□□ -0.3
XRCC6-208	ENST00000478914	NAIP	Q13075	1403 aa		13.18	□□□□□ -0.3
XRCC6-208	ENST00000478914	TMEM94	Q12767	1356 aa		13.18	□□□□□ -0.3
XRCC6-208	ENST00000478914	MED1	Q15648	1581 aa	Predicted RBP	13.16	□□□□□ -0.3
XRCC6-208	ENST00000478914	HFM1	A2PYH4	1435 aa		13.15	□□□□□ -0.3
XRCC6-208	ENST00000478914	CLTCL1	P53675	1640 aa		13.15	□□□□□ -0.3
XRCC6-208	ENST00000478914	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.15	□□□□□ -0.3
XRCC6-208	ENST00000478914	TRIM52	Q96A61	297 aa		13.15	□□□□□ -0.3
XRCC6-208	ENST00000478914	TRPM2	O94759	1503 aa		13.14	□□□□□ -0.31
XRCC6-208	ENST00000478914	ZNF326	Q5BKZ1	582 aa	Known RBP	13.14	□□□□□ -0.31
XRCC6-208	ENST00000478914	TBX22	Q9Y458	520 aa		13.14	□□□□□ -0.31
XRCC6-208	ENST00000478914	MSH6	P52701	1360 aa		13.14	□□□□□ -0.31
XRCC6-208	ENST00000478914	ROBO1	Q9Y6N7	1651 aa		13.13	□□□□□ -0.31
XRCC6-208	ENST00000478914	RBM33	Q96EV2	1170 aa	Known RBP	13.12	□□□□□ -0.31
XRCC6-208	ENST00000478914	PIK3R4	Q99570	1358 aa		13.11	□□□□□ -0.31
XRCC6-208	ENST00000478914	C14orf37	Q86TY3	774 aa		13.11	□□□□□ -0.31
XRCC6-208	ENST00000478914	FAM135B	Q49AJ0	1406 aa		13.11	□□□□□ -0.31
XRCC6-208	ENST00000478914	ADAMTS13	Q76LX8	1427 aa		13.11	□□□□□ -0.31
XRCC6-208	ENST00000478914	PHF23	Q9BUL5	403 aa	Predicted RBP	13.1	□□□□□ -0.31
XRCC6-208	ENST00000478914	SETBP1	Q9Y6X0	1596 aa		13.1	□□□□□ -0.31
XRCC6-208	ENST00000478914	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.09	□□□□□ -0.31
XRCC6-208	ENST00000478914	NRXN3	Q9Y4C0	1643 aa		13.09	□□□□□ -0.31
XRCC6-208	ENST00000478914	NEXMIF	Q5QGS0	1516 aa		13.08	□□□□□ -0.31
XRCC6-208	ENST00000478914	PHLPP1	O60346	1717 aa		13.08	□□□□□ -0.32
XRCC6-208	ENST00000478914	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.08	□□□□□ -0.32
XRCC6-208	ENST00000478914	NCOA3	Q9Y6Q9	1424 aa		13.08	□□□□□ -0.32
XRCC6-208	ENST00000478914	XRN1	Q8IZH2	1706 aa	Known RBP	13.07	□□□□□ -0.32
XRCC6-208	ENST00000478914	SLAIN2	Q9P270	581 aa		13.06	□□□□□ -0.32
XRCC6-208	ENST00000478914	AMOTL2	Q9Y2J4	779 aa		13.06	□□□□□ -0.32
XRCC6-208	ENST00000478914	PPL	O60437	1756 aa		13.06	□□□□□ -0.32
XRCC6-208	ENST00000478914	ATF3	P18847	181 aa		13.04	□□□□□ -0.32
XRCC6-208	ENST00000478914	PTPRU	Q92729	1446 aa		13.04	□□□□□ -0.32
XRCC6-208	ENST00000478914	VGF	O15240	615 aa	Predicted RBP	13.03	□□□□□ -0.32
XRCC6-208	ENST00000478914	CADPS2	Q86UW7	1296 aa		13.03	□□□□□ -0.32
XRCC6-208	ENST00000478914	C19orf44	Q9H6X5	657 aa		13.03	□□□□□ -0.32
XRCC6-208	ENST00000478914	RPGRIP1L	Q68CZ1	1315 aa		13.02	□□□□□ -0.33
XRCC6-208	ENST00000478914	ACIN1	Q9UKV3	1341 aa	Known RBP	13.02	□□□□□ -0.33
XRCC6-208	ENST00000478914	SETD1A	O15047	1707 aa	Known RBP	13.01	□□□□□ -0.33
XRCC6-208	ENST00000478914	CCDC144A	A2RUR9	1427 aa		13	□□□□□ -0.33
XRCC6-208	ENST00000478914	DCC	P43146	1447 aa		13	□□□□□ -0.33
XRCC6-208	ENST00000478914	MET	P08581	1390 aa		13	□□□□□ -0.33
XRCC6-208	ENST00000478914	NALCN	Q8IZF0	1738 aa		12.99	□□□□□ -0.33
XRCC6-208	ENST00000478914	FOXD1	Q16676	465 aa		12.99	□□□□□ -0.33
XRCC6-208	ENST00000478914	COL16A1	Q07092	1604 aa	Predicted RBP	12.99	□□□□□ -0.33
XRCC6-208	ENST00000478914	MPHOSPH9	Q99550	1183 aa		12.98	□□□□□ -0.33
XRCC6-208	ENST00000478914	IFT172	Q9UG01	1749 aa		12.98	□□□□□ -0.33
XRCC6-208	ENST00000478914	SETD5	Q9C0A6	1442 aa		12.97	□□□□□ -0.33
XRCC6-208	ENST00000478914	JCAD	Q9P266	1359 aa		12.97	□□□□□ -0.33
XRCC6-208	ENST00000478914	AHDC1	Q5TGY3	1603 aa	Predicted RBP	12.97	□□□□□ -0.33
XRCC6-208	ENST00000478914	ADGRL3	Q9HAR2	1447 aa		12.96	□□□□□ -0.34
XRCC6-208	ENST00000478914	SHPRH	Q149N8	1683 aa		12.96	□□□□□ -0.34
XRCC6-208	ENST00000478914	RGL3	Q3MIN7	710 aa		12.94	□□□□□ -0.34
XRCC6-208	ENST00000478914	NHSL1	Q5SYE7	1610 aa		12.94	□□□□□ -0.34
XRCC6-208	ENST00000478914	PTCH1	Q13635	1447 aa		12.94	□□□□□ -0.34
XRCC6-208	ENST00000478914	ANKRD30B	Q9BXX2	1392 aa		12.94	□□□□□ -0.34
XRCC6-208	ENST00000478914	ASXL1	Q8IXJ9	1541 aa		12.93	□□□□□ -0.34
XRCC6-208	ENST00000478914	BRINP3	Q76B58	766 aa		12.93	□□□□□ -0.34
XRCC6-208	ENST00000478914	MST1R	Q04912	1400 aa		12.93	□□□□□ -0.34
XRCC6-208	ENST00000478914	RGS17	Q9UGC6	210 aa	Predicted RBP	12.92	□□□□□ -0.34
XRCC6-208	ENST00000478914	SPATA31A6	Q5VVP1	1343 aa		12.91	□□□□□ -0.34
XRCC6-208	ENST00000478914	SPATA31E1	Q6ZUB1	1445 aa		12.91	□□□□□ -0.34
XRCC6-208	ENST00000478914	RAB3GAP2	Q9H2M9	1393 aa		12.91	□□□□□ -0.34
XRCC6-208	ENST00000478914	KNDC1	Q76NI1	1749 aa		12.91	□□□□□ -0.34
XRCC6-208	ENST00000478914	PRAG1	Q86YV5	1406 aa		12.9	□□□□□ -0.34
XRCC6-208	ENST00000478914	MEX3C	Q5U5Q3	659 aa	Known RBP	12.9	□□□□□ -0.34
XRCC6-208	ENST00000478914	ROBO2	Q9HCK4	1378 aa		12.9	□□□□□ -0.34
XRCC6-208	ENST00000478914	ADGRF5	Q8IZF2	1346 aa		12.89	□□□□□ -0.35
XRCC6-208	ENST00000478914	LAMC1	P11047	1609 aa		12.89	□□□□□ -0.35
XRCC6-208	ENST00000478914	C1orf167	Q5SNV9	1468 aa		12.87	□□□□□ -0.35
XRCC6-208	ENST00000478914	PIK3C2G	O75747	1445 aa		12.87	□□□□□ -0.35
XRCC6-208	ENST00000478914	CDC42BPG	Q6DT37	1551 aa		12.86	□□□□□ -0.35
XRCC6-208	ENST00000478914	POTEA	Q6S8J7	498 aa		12.86	□□□□□ -0.35
XRCC6-208	ENST00000478914	LRRC59	Q96AG4	307 aa	Known RBP	12.86	□□□□□ -0.35
XRCC6-208	ENST00000478914	STK26	Q9P289	416 aa		12.86	□□□□□ -0.35
XRCC6-208	ENST00000478914	LRP6	O75581	1613 aa		12.86	□□□□□ -0.35
XRCC6-208	ENST00000478914	LRPPRC	P42704	1394 aa	Known RBP	12.85	□□□□□ -0.35
XRCC6-208	ENST00000478914	NUTM2B	A6NNL0	878 aa	Predicted RBP	12.85	□□□□□ -0.35
XRCC6-208	ENST00000478914	NUTM2E	B1AL46	878 aa	Predicted RBP	12.85	□□□□□ -0.35
XRCC6-208	ENST00000478914	NUTM2A	Q8IVF1	878 aa	Predicted RBP	12.85	□□□□□ -0.35
XRCC6-208	ENST00000478914	MYOM2	P54296	1465 aa		12.85	□□□□□ -0.35
XRCC6-208	ENST00000478914	TECPR2	O15040	1411 aa		12.84	□□□□□ -0.35
XRCC6-208	ENST00000478914	ZNF772	Q68DY9	489 aa	Predicted RBP	12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms