RNA–Protein interactions for RNA: ENST00000478705.5

SFT2D1-202, Transcript of SFT2 domain containing 1, humanhuman

TSL 2

Gene SFT2D1, Length 659 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-202ENST00000478705 NWD1Q149M9 1564 aa25.4■■□□□ 1.66
SFT2D1-202ENST00000478705 KCNA6P17658 529 aa25.4■■□□□ 1.66
SFT2D1-202ENST00000478705 TMEM94Q12767 1356 aa25.38■■□□□ 1.65
SFT2D1-202ENST00000478705 PPARGC1BQ86YN6 1023 aaKnown RBP25.37■■□□□ 1.65
SFT2D1-202ENST00000478705 RIMS2Q9UQ26 1411 aa25.36■■□□□ 1.65
SFT2D1-202ENST00000478705 SENP3Q9H4L4 574 aaPredicted RBP25.35■■□□□ 1.65
SFT2D1-202ENST00000478705 NKTRP30414 1462 aaKnown RBP25.34■■□□□ 1.65
SFT2D1-202ENST00000478705 PLEKHG1Q9ULL1 1385 aa25.34■■□□□ 1.65
SFT2D1-202ENST00000478705 ITGAEP38570 1179 aa25.32■■□□□ 1.64
SFT2D1-202ENST00000478705 RBM33Q96EV2 1170 aaKnown RBP25.32■■□□□ 1.64
SFT2D1-202ENST00000478705 NUP155O75694 1391 aa25.31■■□□□ 1.64
SFT2D1-202ENST00000478705 CHD2O14647 1828 aaKnown RBP25.3■■□□□ 1.64
SFT2D1-202ENST00000478705 FAM135BQ49AJ0 1406 aa25.3■■□□□ 1.64
SFT2D1-202ENST00000478705 PROSER2Q86WR7 435 aaPredicted RBP25.29■■□□□ 1.64
SFT2D1-202ENST00000478705 ADAMTS13Q76LX8 1427 aa25.27■■□□□ 1.64
SFT2D1-202ENST00000478705 BCANQ96GW7 911 aa25.26■■□□□ 1.63
SFT2D1-202ENST00000478705 ROBO1Q9Y6N7 1651 aa25.25■■□□□ 1.63
SFT2D1-202ENST00000478705 CHGAP10645 457 aaKnown RBP25.24■■□□□ 1.63
SFT2D1-202ENST00000478705 RRBP1Q9P2E9 1410 aaKnown RBP25.23■■□□□ 1.63
SFT2D1-202ENST00000478705 PPP1R15AO75807 674 aaPredicted RBP25.23■■□□□ 1.63
SFT2D1-202ENST00000478705 HDGFP51858 240 aaKnown RBP25.23■■□□□ 1.63
SFT2D1-202ENST00000478705 TBX22Q9Y458 520 aa25.23■■□□□ 1.63
SFT2D1-202ENST00000478705 NUTM2DQ5VT03 806 aaPredicted RBP25.22■■□□□ 1.63
SFT2D1-202ENST00000478705 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.21■■□□□ 1.63
SFT2D1-202ENST00000478705 SPHKAPQ2M3C7 1700 aa25.2■■□□□ 1.63
SFT2D1-202ENST00000478705 DIP2AQ14689 1571 aa25.2■■□□□ 1.62
SFT2D1-202ENST00000478705 MSH6P52701 1360 aa25.18■■□□□ 1.62
SFT2D1-202ENST00000478705 PHF23Q9BUL5 403 aaPredicted RBP25.17■■□□□ 1.62
SFT2D1-202ENST00000478705 NRXN3Q9Y4C0 1643 aa25.15■■□□□ 1.62
SFT2D1-202ENST00000478705 NAIPQ13075 1403 aa25.15■■□□□ 1.62
SFT2D1-202ENST00000478705 PIK3R4Q99570 1358 aa25.15■■□□□ 1.62
SFT2D1-202ENST00000478705 RGS17Q9UGC6 210 aaPredicted RBP25.14■■□□□ 1.62
SFT2D1-202ENST00000478705 PTPRUQ92729 1446 aa25.13■■□□□ 1.61
SFT2D1-202ENST00000478705 NCOA3Q9Y6Q9 1424 aa25.13■■□□□ 1.61
SFT2D1-202ENST00000478705 SLAIN2Q9P270 581 aa25.12■■□□□ 1.61
SFT2D1-202ENST00000478705 TRPM2O94759 1503 aa25.12■■□□□ 1.61
SFT2D1-202ENST00000478705 CLTCL1P53675 1640 aa25.11■■□□□ 1.61
SFT2D1-202ENST00000478705 SETBP1Q9Y6X0 1596 aa25.1■■□□□ 1.61
SFT2D1-202ENST00000478705 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.09■■□□□ 1.61
SFT2D1-202ENST00000478705 PHLPP1O60346 1717 aa25.08■■□□□ 1.61
SFT2D1-202ENST00000478705 XRN1Q8IZH2 1706 aaKnown RBP25.07■■□□□ 1.6
SFT2D1-202ENST00000478705 COL16A1Q07092 1604 aaPredicted RBP25.05■■□□□ 1.6
SFT2D1-202ENST00000478705 AMOTL2Q9Y2J4 779 aa25.05■■□□□ 1.6
SFT2D1-202ENST00000478705 NEXMIFQ5QGS0 1516 aa25.05■■□□□ 1.6
SFT2D1-202ENST00000478705 HFM1A2PYH4 1435 aa25.03■■□□□ 1.6
SFT2D1-202ENST00000478705 C19orf44Q9H6X5 657 aa25.01■■□□□ 1.59
SFT2D1-202ENST00000478705 METP08581 1390 aa25.01■■□□□ 1.59
SFT2D1-202ENST00000478705 ZNF326Q5BKZ1 582 aaKnown RBP25■■□□□ 1.59
SFT2D1-202ENST00000478705 C14orf37Q86TY3 774 aa25■■□□□ 1.59
SFT2D1-202ENST00000478705 KIF1BO60333 1816 aa24.98■■□□□ 1.59
SFT2D1-202ENST00000478705 AHDC1Q5TGY3 1603 aaPredicted RBP24.98■■□□□ 1.59
SFT2D1-202ENST00000478705 JCADQ9P266 1359 aa24.98■■□□□ 1.59
SFT2D1-202ENST00000478705 CADPS2Q86UW7 1296 aa24.98■■□□□ 1.59
SFT2D1-202ENST00000478705 POTEAQ6S8J7 498 aa24.97■■□□□ 1.59
SFT2D1-202ENST00000478705 DCCP43146 1447 aa24.95■■□□□ 1.59
SFT2D1-202ENST00000478705 ATF3P18847 181 aa24.95■■□□□ 1.58
SFT2D1-202ENST00000478705 SETD1AO15047 1707 aaKnown RBP24.93■■□□□ 1.58
SFT2D1-202ENST00000478705 LRP6O75581 1613 aa24.92■■□□□ 1.58
SFT2D1-202ENST00000478705 BRINP3Q76B58 766 aa24.91■■□□□ 1.58
SFT2D1-202ENST00000478705 TRIM52Q96A61 297 aa24.91■■□□□ 1.58
SFT2D1-202ENST00000478705 MST1RQ04912 1400 aa24.91■■□□□ 1.58
SFT2D1-202ENST00000478705 NALCNQ8IZF0 1738 aa24.89■■□□□ 1.58
SFT2D1-202ENST00000478705 SHPRHQ149N8 1683 aa24.89■■□□□ 1.58
SFT2D1-202ENST00000478705 ADGRL3Q9HAR2 1447 aa24.88■■□□□ 1.57
SFT2D1-202ENST00000478705 ASXL1Q8IXJ9 1541 aa24.87■■□□□ 1.57
SFT2D1-202ENST00000478705 SLC4A1APQ9BWU0 796 aaKnown RBP24.87■■□□□ 1.57
SFT2D1-202ENST00000478705 NHSL1Q5SYE7 1610 aa24.86■■□□□ 1.57
SFT2D1-202ENST00000478705 PPLO60437 1756 aa24.85■■□□□ 1.57
SFT2D1-202ENST00000478705 SPATA31A6Q5VVP1 1343 aa24.85■■□□□ 1.57
SFT2D1-202ENST00000478705 VGFO15240 615 aaPredicted RBP24.82■■□□□ 1.56
SFT2D1-202ENST00000478705 PTCH1Q13635 1447 aa24.82■■□□□ 1.56
SFT2D1-202ENST00000478705 PRAG1Q86YV5 1406 aa24.82■■□□□ 1.56
SFT2D1-202ENST00000478705 FOXD1Q16676 465 aa24.81■■□□□ 1.56
SFT2D1-202ENST00000478705 RPGRIP1LQ68CZ1 1315 aa24.81■■□□□ 1.56
SFT2D1-202ENST00000478705 ROBO2Q9HCK4 1378 aa24.8■■□□□ 1.56
SFT2D1-202ENST00000478705 SETD5Q9C0A6 1442 aa24.79■■□□□ 1.56
SFT2D1-202ENST00000478705 DDX17Q92841 729 aaKnown RBP24.75■■□□□ 1.55
SFT2D1-202ENST00000478705 SPATA31E1Q6ZUB1 1445 aa24.75■■□□□ 1.55
SFT2D1-202ENST00000478705 C1orf167Q5SNV9 1468 aa24.75■■□□□ 1.55
SFT2D1-202ENST00000478705 IFT172Q9UG01 1749 aa24.73■■□□□ 1.55
SFT2D1-202ENST00000478705 LAMC1P11047 1609 aa24.73■■□□□ 1.55
SFT2D1-202ENST00000478705 CCDC144AA2RUR9 1427 aa24.71■■□□□ 1.55
SFT2D1-202ENST00000478705 ADGRF5Q8IZF2 1346 aa24.71■■□□□ 1.55
SFT2D1-202ENST00000478705 MPHOSPH9Q99550 1183 aa24.71■■□□□ 1.55
SFT2D1-202ENST00000478705 MEX3CQ5U5Q3 659 aaKnown RBP24.7■■□□□ 1.54
SFT2D1-202ENST00000478705 PNPLA6Q8IY17 1366 aa24.69■■□□□ 1.54
SFT2D1-202ENST00000478705 NUTM2BA6NNL0 878 aaPredicted RBP24.68■■□□□ 1.54
SFT2D1-202ENST00000478705 NUTM2EB1AL46 878 aaPredicted RBP24.68■■□□□ 1.54
SFT2D1-202ENST00000478705 NUTM2AQ8IVF1 878 aaPredicted RBP24.68■■□□□ 1.54
SFT2D1-202ENST00000478705 LRRC59Q96AG4 307 aaKnown RBP24.68■■□□□ 1.54
SFT2D1-202ENST00000478705 ZNF772Q68DY9 489 aaPredicted RBP24.67■■□□□ 1.54
SFT2D1-202ENST00000478705 ORAI2Q96SN7 254 aa24.66■■□□□ 1.54
SFT2D1-202ENST00000478705 RGL3Q3MIN7 710 aa24.65■■□□□ 1.54
SFT2D1-202ENST00000478705 CDC42BPGQ6DT37 1551 aa24.63■■□□□ 1.53
SFT2D1-202ENST00000478705 TECPR2O15040 1411 aa24.63■■□□□ 1.53
SFT2D1-202ENST00000478705 ANKRD30BQ9BXX2 1392 aa24.63■■□□□ 1.53
SFT2D1-202ENST00000478705 SOS2Q07890 1332 aaPredicted RBP24.62■■□□□ 1.53
SFT2D1-202ENST00000478705 PIK3C2GO75747 1445 aa24.62■■□□□ 1.53
SFT2D1-202ENST00000478705 AFF2P51816 1311 aa24.61■■□□□ 1.53
SFT2D1-202ENST00000478705 KNDC1Q76NI1 1749 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms