RNA–Protein interactions for RNA: ENST00000478681.1

COL4A2-205, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-205ENST00000478681 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
COL4A2-205ENST00000478681 XIRP1Q702N8 1843 aaKnown RBP19.95■□□□□ 0.78
COL4A2-205ENST00000478681 HDGFP51858 240 aaKnown RBP19.93■□□□□ 0.78
COL4A2-205ENST00000478681 PLEKHG1Q9ULL1 1385 aa19.92■□□□□ 0.78
COL4A2-205ENST00000478681 RIMS2Q9UQ26 1411 aa19.92■□□□□ 0.78
COL4A2-205ENST00000478681 ILDR2Q71H61 639 aa19.9■□□□□ 0.78
COL4A2-205ENST00000478681 NAIPQ13075 1403 aa19.89■□□□□ 0.77
COL4A2-205ENST00000478681 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.89■□□□□ 0.77
COL4A2-205ENST00000478681 TMEM94Q12767 1356 aa19.87■□□□□ 0.77
COL4A2-205ENST00000478681 CHGAP10645 457 aaKnown RBP19.87■□□□□ 0.77
COL4A2-205ENST00000478681 NWD1Q149M9 1564 aa19.87■□□□□ 0.77
COL4A2-205ENST00000478681 PPP1R15AO75807 674 aaPredicted RBP19.86■□□□□ 0.77
COL4A2-205ENST00000478681 BCANQ96GW7 911 aa19.86■□□□□ 0.77
COL4A2-205ENST00000478681 TBX22Q9Y458 520 aa19.86■□□□□ 0.77
COL4A2-205ENST00000478681 CHD2O14647 1828 aaKnown RBP19.86■□□□□ 0.77
COL4A2-205ENST00000478681 PROSER2Q86WR7 435 aaPredicted RBP19.85■□□□□ 0.77
COL4A2-205ENST00000478681 NKTRP30414 1462 aaKnown RBP19.85■□□□□ 0.77
COL4A2-205ENST00000478681 SPHKAPQ2M3C7 1700 aa19.83■□□□□ 0.77
COL4A2-205ENST00000478681 HFM1A2PYH4 1435 aa19.82■□□□□ 0.76
COL4A2-205ENST00000478681 ADAMTS13Q76LX8 1427 aa19.82■□□□□ 0.76
COL4A2-205ENST00000478681 NUTM2DQ5VT03 806 aaPredicted RBP19.81■□□□□ 0.76
COL4A2-205ENST00000478681 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
COL4A2-205ENST00000478681 FAM135BQ49AJ0 1406 aa19.8■□□□□ 0.76
COL4A2-205ENST00000478681 RBM33Q96EV2 1170 aaKnown RBP19.8■□□□□ 0.76
COL4A2-205ENST00000478681 PIK3R4Q99570 1358 aa19.79■□□□□ 0.76
COL4A2-205ENST00000478681 DIP2AQ14689 1571 aa19.78■□□□□ 0.76
COL4A2-205ENST00000478681 MED1Q15648 1581 aaPredicted RBP19.76■□□□□ 0.75
COL4A2-205ENST00000478681 NCOA3Q9Y6Q9 1424 aa19.76■□□□□ 0.75
COL4A2-205ENST00000478681 SOCS7O14512 581 aa19.75■□□□□ 0.75
COL4A2-205ENST00000478681 TRPM2O94759 1503 aa19.75■□□□□ 0.75
COL4A2-205ENST00000478681 MSH6P52701 1360 aa19.74■□□□□ 0.75
COL4A2-205ENST00000478681 CLTCL1P53675 1640 aa19.73■□□□□ 0.75
COL4A2-205ENST00000478681 TRIM52Q96A61 297 aa19.73■□□□□ 0.75
COL4A2-205ENST00000478681 ZNF326Q5BKZ1 582 aaKnown RBP19.72■□□□□ 0.75
COL4A2-205ENST00000478681 SETBP1Q9Y6X0 1596 aa19.71■□□□□ 0.75
COL4A2-205ENST00000478681 SLAIN2Q9P270 581 aa19.71■□□□□ 0.75
COL4A2-205ENST00000478681 NRXN3Q9Y4C0 1643 aa19.71■□□□□ 0.75
COL4A2-205ENST00000478681 PTPRUQ92729 1446 aa19.7■□□□□ 0.74
COL4A2-205ENST00000478681 KIF1BO60333 1816 aa19.7■□□□□ 0.74
COL4A2-205ENST00000478681 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
COL4A2-205ENST00000478681 AMOTL2Q9Y2J4 779 aa19.7■□□□□ 0.74
COL4A2-205ENST00000478681 ROBO1Q9Y6N7 1651 aa19.7■□□□□ 0.74
COL4A2-205ENST00000478681 NEXMIFQ5QGS0 1516 aa19.68■□□□□ 0.74
COL4A2-205ENST00000478681 C19orf44Q9H6X5 657 aa19.67■□□□□ 0.74
COL4A2-205ENST00000478681 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.65■□□□□ 0.74
COL4A2-205ENST00000478681 METP08581 1390 aa19.64■□□□□ 0.73
COL4A2-205ENST00000478681 XRN1Q8IZH2 1706 aaKnown RBP19.64■□□□□ 0.73
COL4A2-205ENST00000478681 C14orf37Q86TY3 774 aa19.63■□□□□ 0.73
COL4A2-205ENST00000478681 CADPS2Q86UW7 1296 aa19.63■□□□□ 0.73
COL4A2-205ENST00000478681 RPGRIP1LQ68CZ1 1315 aa19.62■□□□□ 0.73
COL4A2-205ENST00000478681 VGFO15240 615 aaPredicted RBP19.61■□□□□ 0.73
COL4A2-205ENST00000478681 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
COL4A2-205ENST00000478681 ATF3P18847 181 aa19.6■□□□□ 0.73
COL4A2-205ENST00000478681 FOXD1Q16676 465 aa19.59■□□□□ 0.73
COL4A2-205ENST00000478681 MPHOSPH9Q99550 1183 aa19.59■□□□□ 0.73
COL4A2-205ENST00000478681 DCCP43146 1447 aa19.59■□□□□ 0.73
COL4A2-205ENST00000478681 PHLPP1O60346 1717 aa19.57■□□□□ 0.72
COL4A2-205ENST00000478681 RGS17Q9UGC6 210 aaPredicted RBP19.57■□□□□ 0.72
COL4A2-205ENST00000478681 ACIN1Q9UKV3 1341 aaKnown RBP19.56■□□□□ 0.72
COL4A2-205ENST00000478681 PPLO60437 1756 aa19.55■□□□□ 0.72
COL4A2-205ENST00000478681 SETD1AO15047 1707 aaKnown RBP19.55■□□□□ 0.72
COL4A2-205ENST00000478681 JCADQ9P266 1359 aa19.54■□□□□ 0.72
COL4A2-205ENST00000478681 COL16A1Q07092 1604 aaPredicted RBP19.54■□□□□ 0.72
COL4A2-205ENST00000478681 BRINP3Q76B58 766 aa19.53■□□□□ 0.72
COL4A2-205ENST00000478681 CCDC144AA2RUR9 1427 aa19.52■□□□□ 0.72
COL4A2-205ENST00000478681 SPATA31E1Q6ZUB1 1445 aa19.52■□□□□ 0.72
COL4A2-205ENST00000478681 SETD5Q9C0A6 1442 aa19.52■□□□□ 0.72
COL4A2-205ENST00000478681 AHDC1Q5TGY3 1603 aaPredicted RBP19.52■□□□□ 0.72
COL4A2-205ENST00000478681 PRAG1Q86YV5 1406 aa19.51■□□□□ 0.71
COL4A2-205ENST00000478681 ADGRL3Q9HAR2 1447 aa19.51■□□□□ 0.71
COL4A2-205ENST00000478681 MST1RQ04912 1400 aa19.51■□□□□ 0.71
COL4A2-205ENST00000478681 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
COL4A2-205ENST00000478681 ROBO2Q9HCK4 1378 aa19.48■□□□□ 0.71
COL4A2-205ENST00000478681 ADGRF5Q8IZF2 1346 aa19.48■□□□□ 0.71
COL4A2-205ENST00000478681 RGL3Q3MIN7 710 aa19.47■□□□□ 0.71
COL4A2-205ENST00000478681 NALCNQ8IZF0 1738 aa19.47■□□□□ 0.71
COL4A2-205ENST00000478681 ANKRD30BQ9BXX2 1392 aa19.46■□□□□ 0.71
COL4A2-205ENST00000478681 ASXL1Q8IXJ9 1541 aa19.46■□□□□ 0.71
COL4A2-205ENST00000478681 SPATA31A6Q5VVP1 1343 aa19.45■□□□□ 0.7
COL4A2-205ENST00000478681 IFT172Q9UG01 1749 aa19.45■□□□□ 0.7
COL4A2-205ENST00000478681 RAB3GAP2Q9H2M9 1393 aa19.44■□□□□ 0.7
COL4A2-205ENST00000478681 POTEAQ6S8J7 498 aa19.44■□□□□ 0.7
COL4A2-205ENST00000478681 SHPRHQ149N8 1683 aa19.43■□□□□ 0.7
COL4A2-205ENST00000478681 NHSL1Q5SYE7 1610 aa19.42■□□□□ 0.7
COL4A2-205ENST00000478681 C1orf167Q5SNV9 1468 aa19.41■□□□□ 0.7
COL4A2-205ENST00000478681 LRP6O75581 1613 aa19.4■□□□□ 0.7
COL4A2-205ENST00000478681 HRCP23327 699 aa19.39■□□□□ 0.69
COL4A2-205ENST00000478681 TECPR2O15040 1411 aa19.39■□□□□ 0.69
COL4A2-205ENST00000478681 PIK3C2GO75747 1445 aa19.39■□□□□ 0.69
COL4A2-205ENST00000478681 LRRC59Q96AG4 307 aaKnown RBP19.38■□□□□ 0.69
COL4A2-205ENST00000478681 ABCC11Q96J66 1382 aa19.38■□□□□ 0.69
COL4A2-205ENST00000478681 LRPPRCP42704 1394 aaKnown RBP19.37■□□□□ 0.69
COL4A2-205ENST00000478681 DDX17Q92841 729 aaKnown RBP19.37■□□□□ 0.69
COL4A2-205ENST00000478681 LAMC1P11047 1609 aa19.36■□□□□ 0.69
COL4A2-205ENST00000478681 NRXN1Q9ULB1 1477 aa19.35■□□□□ 0.69
COL4A2-205ENST00000478681 TMEM132EQ6IEE7 984 aa19.35■□□□□ 0.69
COL4A2-205ENST00000478681 ORAI2Q96SN7 254 aa19.35■□□□□ 0.69
COL4A2-205ENST00000478681 C14orf93Q9H972 538 aaKnown RBP19.35■□□□□ 0.69
COL4A2-205ENST00000478681 STK26Q9P289 416 aa19.34■□□□□ 0.69
COL4A2-205ENST00000478681 WAPLQ7Z5K2 1190 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms