RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 CPS1P31327 1500 aa11.78□□□□□ -0.52
DDX39B-218ENST00000478365 TXNDC2Q86VQ3 553 aa11.78□□□□□ -0.52
DDX39B-218ENST00000478365 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
DDX39B-218ENST00000478365 FBXO41Q8TF61 875 aa11.76□□□□□ -0.53
DDX39B-218ENST00000478365 KIF1BO60333 1816 aa11.76□□□□□ -0.53
DDX39B-218ENST00000478365 RIMS2Q9UQ26 1411 aa11.76□□□□□ -0.53
DDX39B-218ENST00000478365 LTBP4Q8N2S1 1624 aa11.75□□□□□ -0.53
DDX39B-218ENST00000478365 PPP1R15AO75807 674 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-218ENST00000478365 RAB3GAP2Q9H2M9 1393 aa11.75□□□□□ -0.53
DDX39B-218ENST00000478365 PLEKHG1Q9ULL1 1385 aa11.75□□□□□ -0.53
DDX39B-218ENST00000478365 ZFYVE9O95405 1425 aa11.75□□□□□ -0.53
DDX39B-218ENST00000478365 MYO5BQ9ULV0 1848 aa11.74□□□□□ -0.53
DDX39B-218ENST00000478365 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
DDX39B-218ENST00000478365 LTKP29376 864 aa11.73□□□□□ -0.53
DDX39B-218ENST00000478365 DIP2AQ14689 1571 aa11.73□□□□□ -0.53
DDX39B-218ENST00000478365 MPHOSPH9Q99550 1183 aa11.73□□□□□ -0.53
DDX39B-218ENST00000478365 CLTCL1P53675 1640 aa11.72□□□□□ -0.53
DDX39B-218ENST00000478365 CCDC144AA2RUR9 1427 aa11.72□□□□□ -0.53
DDX39B-218ENST00000478365 ZNF335Q9H4Z2 1342 aaPredicted RBP11.72□□□□□ -0.53
DDX39B-218ENST00000478365 RPGRIP1LQ68CZ1 1315 aa11.71□□□□□ -0.53
DDX39B-218ENST00000478365 PIK3R4Q99570 1358 aa11.7□□□□□ -0.54
DDX39B-218ENST00000478365 ZNF326Q5BKZ1 582 aaKnown RBP11.7□□□□□ -0.54
DDX39B-218ENST00000478365 BCANQ96GW7 911 aa11.69□□□□□ -0.54
DDX39B-218ENST00000478365 NKTRP30414 1462 aaKnown RBP11.69□□□□□ -0.54
DDX39B-218ENST00000478365 TBX22Q9Y458 520 aa11.68□□□□□ -0.54
DDX39B-218ENST00000478365 SETBP1Q9Y6X0 1596 aa11.67□□□□□ -0.54
DDX39B-218ENST00000478365 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
DDX39B-218ENST00000478365 NWD1Q149M9 1564 aa11.67□□□□□ -0.54
DDX39B-218ENST00000478365 NEXMIFQ5QGS0 1516 aa11.66□□□□□ -0.54
DDX39B-218ENST00000478365 KCNA6P17658 529 aa11.66□□□□□ -0.54
DDX39B-218ENST00000478365 ANKRD30BQ9BXX2 1392 aa11.66□□□□□ -0.54
DDX39B-218ENST00000478365 ILDR1Q86SU0 546 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-218ENST00000478365 NCOA3Q9Y6Q9 1424 aa11.64□□□□□ -0.55
DDX39B-218ENST00000478365 CHD2O14647 1828 aaKnown RBP11.64□□□□□ -0.55
DDX39B-218ENST00000478365 LRRC7Q96NW7 1537 aa11.64□□□□□ -0.55
DDX39B-218ENST00000478365 PPLO60437 1756 aa11.64□□□□□ -0.55
DDX39B-218ENST00000478365 SPATA31E1Q6ZUB1 1445 aa11.63□□□□□ -0.55
DDX39B-218ENST00000478365 ADAMTS13Q76LX8 1427 aa11.63□□□□□ -0.55
DDX39B-218ENST00000478365 TOM1O60784 492 aa11.63□□□□□ -0.55
DDX39B-218ENST00000478365 STAC3Q96MF2 364 aa11.63□□□□□ -0.55
DDX39B-218ENST00000478365 SLC26A8Q96RN1 970 aa11.63□□□□□ -0.55
DDX39B-218ENST00000478365 STRCP1A6NGW2 1772 aa11.62□□□□□ -0.55
DDX39B-218ENST00000478365 TRIM26Q12899 539 aaPredicted RBP11.62□□□□□ -0.55
DDX39B-218ENST00000478365 UBAP1LF5GYI3 381 aa11.61□□□□□ -0.55
DDX39B-218ENST00000478365 IFT172Q9UG01 1749 aa11.6□□□□□ -0.55
DDX39B-218ENST00000478365 NRXN3Q9Y4C0 1643 aa11.6□□□□□ -0.55
DDX39B-218ENST00000478365 NUTM2DQ5VT03 806 aaPredicted RBP11.59□□□□□ -0.55
DDX39B-218ENST00000478365 PROSER2Q86WR7 435 aaPredicted RBP11.59□□□□□ -0.55
DDX39B-218ENST00000478365 MYOM2P54296 1465 aa11.58□□□□□ -0.56
DDX39B-218ENST00000478365 MSH6P52701 1360 aa11.58□□□□□ -0.56
DDX39B-218ENST00000478365 TMEM94Q12767 1356 aa11.58□□□□□ -0.56
DDX39B-218ENST00000478365 PRAG1Q86YV5 1406 aa11.58□□□□□ -0.56
DDX39B-218ENST00000478365 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
DDX39B-218ENST00000478365 LAMC1P11047 1609 aa11.57□□□□□ -0.56
DDX39B-218ENST00000478365 XIRP1Q702N8 1843 aaKnown RBP11.56□□□□□ -0.56
DDX39B-218ENST00000478365 PTCH1Q13635 1447 aa11.56□□□□□ -0.56
DDX39B-218ENST00000478365 RGL3Q3MIN7 710 aa11.56□□□□□ -0.56
DDX39B-218ENST00000478365 ALKQ9UM73 1620 aa11.56□□□□□ -0.56
DDX39B-218ENST00000478365 PIK3C2GO75747 1445 aa11.55□□□□□ -0.56
DDX39B-218ENST00000478365 DCCP43146 1447 aa11.55□□□□□ -0.56
DDX39B-218ENST00000478365 AMOTL2Q9Y2J4 779 aa11.55□□□□□ -0.56
DDX39B-218ENST00000478365 SETD1AO15047 1707 aaKnown RBP11.55□□□□□ -0.56
DDX39B-218ENST00000478365 NRXN1Q9ULB1 1477 aa11.54□□□□□ -0.56
DDX39B-218ENST00000478365 METP08581 1390 aa11.54□□□□□ -0.56
DDX39B-218ENST00000478365 C14orf37Q86TY3 774 aa11.53□□□□□ -0.56
DDX39B-218ENST00000478365 C19orf44Q9H6X5 657 aa11.53□□□□□ -0.56
DDX39B-218ENST00000478365 PTPRUQ92729 1446 aa11.52□□□□□ -0.56
DDX39B-218ENST00000478365 CADPS2Q86UW7 1296 aa11.52□□□□□ -0.57
DDX39B-218ENST00000478365 ADGRF5Q8IZF2 1346 aa11.52□□□□□ -0.57
DDX39B-218ENST00000478365 SCAF1Q9H7N4 1312 aaKnown RBP11.51□□□□□ -0.57
DDX39B-218ENST00000478365 KNDC1Q76NI1 1749 aa11.51□□□□□ -0.57
DDX39B-218ENST00000478365 TECPR2O15040 1411 aa11.51□□□□□ -0.57
DDX39B-218ENST00000478365 FAM135BQ49AJ0 1406 aa11.51□□□□□ -0.57
DDX39B-218ENST00000478365 ATF3P18847 181 aa11.5□□□□□ -0.57
DDX39B-218ENST00000478365 C14orf93Q9H972 538 aaKnown RBP11.5□□□□□ -0.57
DDX39B-218ENST00000478365 LRPPRCP42704 1394 aaKnown RBP11.5□□□□□ -0.57
DDX39B-218ENST00000478365 ADGRL3Q9HAR2 1447 aa11.5□□□□□ -0.57
DDX39B-218ENST00000478365 PIP4K2BP78356 416 aa11.49□□□□□ -0.57
DDX39B-218ENST00000478365 DHX57Q6P158 1386 aaKnown RBP11.49□□□□□ -0.57
DDX39B-218ENST00000478365 ABCC11Q96J66 1382 aa11.49□□□□□ -0.57
DDX39B-218ENST00000478365 SIRT1Q96EB6 747 aa11.48□□□□□ -0.57
DDX39B-218ENST00000478365 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.48□□□□□ -0.57
DDX39B-218ENST00000478365 DCAF11Q8TEB1 546 aa11.47□□□□□ -0.57
DDX39B-218ENST00000478365 SLAIN2Q9P270 581 aa11.47□□□□□ -0.57
DDX39B-218ENST00000478365 KIAA1210Q9ULL0 1709 aa11.46□□□□□ -0.57
DDX39B-218ENST00000478365 YTHDC2Q9H6S0 1430 aaKnown RBP11.46□□□□□ -0.57
DDX39B-218ENST00000478365 DLC1Q96QB1 1528 aa11.45□□□□□ -0.58
DDX39B-218ENST00000478365 ROBO2Q9HCK4 1378 aa11.45□□□□□ -0.58
DDX39B-218ENST00000478365 CDC42BPGQ6DT37 1551 aa11.45□□□□□ -0.58
DDX39B-218ENST00000478365 ASXL1Q8IXJ9 1541 aa11.45□□□□□ -0.58
DDX39B-218ENST00000478365 NALCNQ8IZF0 1738 aa11.44□□□□□ -0.58
DDX39B-218ENST00000478365 ROBO1Q9Y6N7 1651 aa11.44□□□□□ -0.58
DDX39B-218ENST00000478365 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
DDX39B-218ENST00000478365 ADGRB1O14514 1584 aa11.42□□□□□ -0.58
DDX39B-218ENST00000478365 CLSPNQ9HAW4 1339 aa11.42□□□□□ -0.58
DDX39B-218ENST00000478365 HSPA1LP34931 641 aa11.42□□□□□ -0.58
DDX39B-218ENST00000478365 CFAP70Q5T0N1 1121 aa11.42□□□□□ -0.58
DDX39B-218ENST00000478365 RBM33Q96EV2 1170 aaKnown RBP11.42□□□□□ -0.58
DDX39B-218ENST00000478365 EIF3AQ14152 1382 aaKnown RBP11.41□□□□□ -0.58
DDX39B-218ENST00000478365 STK26Q9P289 416 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms