RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 HECW1Q76N89 1606 aa14.31□□□□□ -0.12
GFM1-207ENST00000478254 PLEKHD1A6NEE1 506 aa14.31□□□□□ -0.12
GFM1-207ENST00000478254 GRIN2BQ13224 1484 aa14.31□□□□□ -0.12
GFM1-207ENST00000478254 APBB1O00213 710 aa14.31□□□□□ -0.12
GFM1-207ENST00000478254 PLCB2Q00722 1185 aa14.3□□□□□ -0.12
GFM1-207ENST00000478254 SMC4Q9NTJ3 1288 aa14.3□□□□□ -0.12
GFM1-207ENST00000478254 POLA1P09884 1462 aaPredicted RBP14.3□□□□□ -0.12
GFM1-207ENST00000478254 RNF214Q8ND24 703 aa14.3□□□□□ -0.12
GFM1-207ENST00000478254 PRG4Q92954 1404 aaPredicted RBP14.3□□□□□ -0.12
GFM1-207ENST00000478254 EPRSP07814 1512 aaKnown RBP14.29□□□□□ -0.12
GFM1-207ENST00000478254 U2SURPO15042 1029 aaKnown RBP14.29□□□□□ -0.12
GFM1-207ENST00000478254 CAVIN1Q6NZI2 390 aaKnown RBP14.29□□□□□ -0.12
GFM1-207ENST00000478254 TSR2Q969E8 191 aaKnown RBP14.29□□□□□ -0.12
GFM1-207ENST00000478254 FSD2A1L4K1 749 aa14.29□□□□□ -0.12
GFM1-207ENST00000478254 MCTP1Q6DN14 999 aa14.29□□□□□ -0.12
GFM1-207ENST00000478254 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
GFM1-207ENST00000478254 BCL11BQ9C0K0 894 aaPredicted RBP14.28□□□□□ -0.12
GFM1-207ENST00000478254 PDCL3Q9H2J4 239 aa14.28□□□□□ -0.12
GFM1-207ENST00000478254 NESP48681 1621 aa14.28□□□□□ -0.12
GFM1-207ENST00000478254 PZPP20742 1482 aa14.28□□□□□ -0.12
GFM1-207ENST00000478254 CCDC144AA2RUR9 1427 aa14.27□□□□□ -0.12
GFM1-207ENST00000478254 TPM2P07951 284 aa14.27□□□□□ -0.12
GFM1-207ENST00000478254 MORC1Q86VD1 984 aa14.27□□□□□ -0.12
GFM1-207ENST00000478254 THOC2Q8NI27 1593 aaKnown RBP14.27□□□□□ -0.12
GFM1-207ENST00000478254 U2AF1L5P0DN76 240 aaPredicted RBP14.27□□□□□ -0.13
GFM1-207ENST00000478254 SSFA2P28290 1259 aa14.27□□□□□ -0.13
GFM1-207ENST00000478254 U2AF1Q01081 240 aaKnown RBP eCLIP14.27□□□□□ -0.13
GFM1-207ENST00000478254 PDE3AQ14432 1141 aa14.27□□□□□ -0.13
GFM1-207ENST00000478254 WWC1Q8IX03 1113 aa14.27□□□□□ -0.13
GFM1-207ENST00000478254 TESK2Q96S53 571 aa14.27□□□□□ -0.13
GFM1-207ENST00000478254 NOL8Q76FK4 1167 aaKnown RBP14.26□□□□□ -0.13
GFM1-207ENST00000478254 TCP11L2Q8N4U5 519 aa14.26□□□□□ -0.13
GFM1-207ENST00000478254 UQCRHLA0A096LP55 91 aa14.25□□□□□ -0.13
GFM1-207ENST00000478254 UQCRHP07919 91 aa14.25□□□□□ -0.13
GFM1-207ENST00000478254 CALD1Q05682 793 aaKnown RBP14.25□□□□□ -0.13
GFM1-207ENST00000478254 ANKRD45Q5TZF3 282 aa14.25□□□□□ -0.13
GFM1-207ENST00000478254 RARSP54136 660 aaKnown RBP14.24□□□□□ -0.13
GFM1-207ENST00000478254 C1orf115Q9H7X2 142 aa14.24□□□□□ -0.13
GFM1-207ENST00000478254 ROCK1Q13464 1354 aa14.24□□□□□ -0.13
GFM1-207ENST00000478254 ELL2O00472 640 aaPredicted RBP14.24□□□□□ -0.13
GFM1-207ENST00000478254 ERBINQ96RT1 1412 aa14.23□□□□□ -0.13
GFM1-207ENST00000478254 GAPVD1Q14C86 1478 aa14.23□□□□□ -0.13
GFM1-207ENST00000478254 FAM177BA6PVY3 158 aa14.23□□□□□ -0.13
GFM1-207ENST00000478254 SAFB2Q14151 953 aaKnown RBP eCLIP14.23□□□□□ -0.13
GFM1-207ENST00000478254 ZSCAN30Q86W11 494 aa14.23□□□□□ -0.13
GFM1-207ENST00000478254 DZIP1LQ8IYY4 767 aaKnown RBP14.23□□□□□ -0.13
GFM1-207ENST00000478254 NKTRP30414 1462 aaKnown RBP14.23□□□□□ -0.13
GFM1-207ENST00000478254 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
GFM1-207ENST00000478254 TSC1Q92574 1164 aa14.22□□□□□ -0.13
GFM1-207ENST00000478254 CHAMP1Q96JM3 812 aa14.22□□□□□ -0.13
GFM1-207ENST00000478254 PRDM2Q13029 1718 aa14.22□□□□□ -0.13
GFM1-207ENST00000478254 RALGAPBQ86X10 1494 aa14.22□□□□□ -0.13
GFM1-207ENST00000478254 KDM5CP41229 1560 aa14.21□□□□□ -0.13
GFM1-207ENST00000478254 ZKSCAN2Q63HK3 967 aa14.21□□□□□ -0.13
GFM1-207ENST00000478254 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.21□□□□□ -0.13
GFM1-207ENST00000478254 RBM27Q9P2N5 1060 aaKnown RBP14.21□□□□□ -0.13
GFM1-207ENST00000478254 TCOF1Q13428 1488 aaKnown RBP14.21□□□□□ -0.14
GFM1-207ENST00000478254 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
GFM1-207ENST00000478254 PRPF40AO75400 957 aaKnown RBP14.2□□□□□ -0.14
GFM1-207ENST00000478254 CCDC173Q0VFZ6 552 aa14.2□□□□□ -0.14
GFM1-207ENST00000478254 BLMP54132 1417 aaPredicted RBP14.2□□□□□ -0.14
GFM1-207ENST00000478254 JARID2Q92833 1246 aaPredicted RBP14.19□□□□□ -0.14
GFM1-207ENST00000478254 IGSF3O75054 1194 aa14.19□□□□□ -0.14
GFM1-207ENST00000478254 ZMYM4Q5VZL5 1548 aa14.19□□□□□ -0.14
GFM1-207ENST00000478254 TOPBP1Q92547 1522 aa14.19□□□□□ -0.14
GFM1-207ENST00000478254 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
GFM1-207ENST00000478254 CHMP7Q8WUX9 453 aaPredicted RBP14.18□□□□□ -0.14
GFM1-207ENST00000478254 HMGXB3Q12766 1538 aa14.18□□□□□ -0.14
GFM1-207ENST00000478254 KIAA0586Q9BVV6 1533 aa14.18□□□□□ -0.14
GFM1-207ENST00000478254 GCC2Q8IWJ2 1684 aa14.17□□□□□ -0.14
GFM1-207ENST00000478254 CD2BP2O95400 341 aaKnown RBP14.17□□□□□ -0.14
GFM1-207ENST00000478254 EXOSC9Q06265 439 aaKnown RBP14.17□□□□□ -0.14
GFM1-207ENST00000478254 SKOR2Q2VWA4 1001 aaPredicted RBP14.17□□□□□ -0.14
GFM1-207ENST00000478254 MVPQ14764 893 aaKnown RBP14.17□□□□□ -0.14
GFM1-207ENST00000478254 CAMSAP2Q08AD1 1489 aa14.17□□□□□ -0.14
GFM1-207ENST00000478254 CBX1P83916 185 aa14.17□□□□□ -0.14
GFM1-207ENST00000478254 ABCA5Q8WWZ7 1642 aa14.16□□□□□ -0.14
GFM1-207ENST00000478254 ABCA10Q8WWZ4 1543 aa14.16□□□□□ -0.14
GFM1-207ENST00000478254 ZNF521Q96K83 1311 aa14.16□□□□□ -0.14
GFM1-207ENST00000478254 GAS2L2Q8NHY3 880 aa14.15□□□□□ -0.14
GFM1-207ENST00000478254 MTHFSP49914 203 aa14.15□□□□□ -0.14
GFM1-207ENST00000478254 RIPK4P57078 832 aa14.15□□□□□ -0.14
GFM1-207ENST00000478254 NOB1Q9ULX3 412 aaKnown RBP14.15□□□□□ -0.14
GFM1-207ENST00000478254 NUTM2DQ5VT03 806 aaPredicted RBP14.14□□□□□ -0.15
GFM1-207ENST00000478254 ZNF830Q96NB3 372 aaPredicted RBP14.14□□□□□ -0.15
GFM1-207ENST00000478254 TRAK1Q9UPV9 953 aa14.14□□□□□ -0.15
GFM1-207ENST00000478254 CFAP53Q96M91 514 aa14.14□□□□□ -0.15
GFM1-207ENST00000478254 SYCE3A1L190 88 aa14.13□□□□□ -0.15
GFM1-207ENST00000478254 TMEM57Q8N5G2 664 aa14.13□□□□□ -0.15
GFM1-207ENST00000478254 OFD1O75665 1012 aa14.13□□□□□ -0.15
GFM1-207ENST00000478254 RUNDC1Q96C34 613 aa14.13□□□□□ -0.15
GFM1-207ENST00000478254 LRRIQ1Q96JM4 1722 aa14.13□□□□□ -0.15
GFM1-207ENST00000478254 CFAP70Q5T0N1 1121 aa14.13□□□□□ -0.15
GFM1-207ENST00000478254 SLC12A5Q9H2X9 1139 aa14.13□□□□□ -0.15
GFM1-207ENST00000478254 PRIM1P49642 420 aaKnown RBP14.12□□□□□ -0.15
GFM1-207ENST00000478254 DNAJC5BQ9UF47 199 aa14.12□□□□□ -0.15
GFM1-207ENST00000478254 K7ELQ4 463 aaPredicted RBP14.12□□□□□ -0.15
GFM1-207ENST00000478254 KIF14Q15058 1648 aa14.12□□□□□ -0.15
GFM1-207ENST00000478254 BAG4O95429 457 aaKnown RBP14.11□□□□□ -0.15
GFM1-207ENST00000478254 PLEKHH2Q8IVE3 1493 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms