RNA–Protein interactions for RNA: ENST00000478197.1

C2orf88-207, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-207ENST00000478197 XIRP1Q702N8 1843 aaKnown RBP22.16■■□□□ 1.14
C2orf88-207ENST00000478197 ALKQ9UM73 1620 aa22.13■■□□□ 1.13
C2orf88-207ENST00000478197 TMEM131LA2VDJ0 1609 aa22.11■■□□□ 1.13
C2orf88-207ENST00000478197 HSPA1LP34931 641 aa22.09■■□□□ 1.13
C2orf88-207ENST00000478197 RAB3GAP2Q9H2M9 1393 aa22.09■■□□□ 1.13
C2orf88-207ENST00000478197 PCGF6Q9BYE7 350 aa22.08■■□□□ 1.13
C2orf88-207ENST00000478197 NUP155O75694 1391 aa22.05■■□□□ 1.12
C2orf88-207ENST00000478197 SLC26A8Q96RN1 970 aa22.05■■□□□ 1.12
C2orf88-207ENST00000478197 HDGFP51858 240 aaKnown RBP22.04■■□□□ 1.12
C2orf88-207ENST00000478197 ILDR2Q71H61 639 aa22.04■■□□□ 1.12
C2orf88-207ENST00000478197 BCANQ96GW7 911 aa22.04■■□□□ 1.12
C2orf88-207ENST00000478197 ZFYVE9O95405 1425 aa22.04■■□□□ 1.12
C2orf88-207ENST00000478197 NWD1Q149M9 1564 aa22.04■■□□□ 1.12
C2orf88-207ENST00000478197 SPHKAPQ2M3C7 1700 aa22.03■■□□□ 1.12
C2orf88-207ENST00000478197 CHD2O14647 1828 aaKnown RBP22.02■■□□□ 1.12
C2orf88-207ENST00000478197 RIMS2Q9UQ26 1411 aa22.02■■□□□ 1.12
C2orf88-207ENST00000478197 MED1Q15648 1581 aaPredicted RBP22.01■■□□□ 1.11
C2orf88-207ENST00000478197 PPP1R15AO75807 674 aaPredicted RBP22.01■■□□□ 1.11
C2orf88-207ENST00000478197 CHGAP10645 457 aaKnown RBP22.01■■□□□ 1.11
C2orf88-207ENST00000478197 KCNA6P17658 529 aa22.01■■□□□ 1.11
C2orf88-207ENST00000478197 NKTRP30414 1462 aaKnown RBP22.01■■□□□ 1.11
C2orf88-207ENST00000478197 PLEKHG1Q9ULL1 1385 aa22■■□□□ 1.11
C2orf88-207ENST00000478197 TRIM52Q96A61 297 aa21.98■■□□□ 1.11
C2orf88-207ENST00000478197 TMEM94Q12767 1356 aa21.98■■□□□ 1.11
C2orf88-207ENST00000478197 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.97■■□□□ 1.11
C2orf88-207ENST00000478197 PROSER2Q86WR7 435 aaPredicted RBP21.96■■□□□ 1.11
C2orf88-207ENST00000478197 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
C2orf88-207ENST00000478197 DIP2AQ14689 1571 aa21.95■■□□□ 1.1
C2orf88-207ENST00000478197 SOCS7O14512 581 aa21.92■■□□□ 1.1
C2orf88-207ENST00000478197 SLC4A1APQ9BWU0 796 aaKnown RBP21.92■■□□□ 1.1
C2orf88-207ENST00000478197 ROBO1Q9Y6N7 1651 aa21.91■■□□□ 1.1
C2orf88-207ENST00000478197 KIF1BO60333 1816 aa21.9■■□□□ 1.1
C2orf88-207ENST00000478197 TBX22Q9Y458 520 aa21.9■■□□□ 1.1
C2orf88-207ENST00000478197 MSH6P52701 1360 aa21.89■■□□□ 1.1
C2orf88-207ENST00000478197 RBM33Q96EV2 1170 aaKnown RBP21.89■■□□□ 1.09
C2orf88-207ENST00000478197 MPHOSPH9Q99550 1183 aa21.89■■□□□ 1.09
C2orf88-207ENST00000478197 FAM135BQ49AJ0 1406 aa21.89■■□□□ 1.09
C2orf88-207ENST00000478197 NUTM2DQ5VT03 806 aaPredicted RBP21.88■■□□□ 1.09
C2orf88-207ENST00000478197 ADAMTS13Q76LX8 1427 aa21.88■■□□□ 1.09
C2orf88-207ENST00000478197 TRPM2O94759 1503 aa21.87■■□□□ 1.09
C2orf88-207ENST00000478197 CLTCL1P53675 1640 aa21.86■■□□□ 1.09
C2orf88-207ENST00000478197 PIK3R4Q99570 1358 aa21.86■■□□□ 1.09
C2orf88-207ENST00000478197 PHF23Q9BUL5 403 aaPredicted RBP21.84■■□□□ 1.09
C2orf88-207ENST00000478197 NRXN3Q9Y4C0 1643 aa21.83■■□□□ 1.08
C2orf88-207ENST00000478197 ZNF326Q5BKZ1 582 aaKnown RBP21.82■■□□□ 1.08
C2orf88-207ENST00000478197 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
C2orf88-207ENST00000478197 CLSPNQ9HAW4 1339 aa21.81■■□□□ 1.08
C2orf88-207ENST00000478197 NCOA3Q9Y6Q9 1424 aa21.81■■□□□ 1.08
C2orf88-207ENST00000478197 PHLPP1O60346 1717 aa21.8■■□□□ 1.08
C2orf88-207ENST00000478197 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.8■■□□□ 1.08
C2orf88-207ENST00000478197 C14orf37Q86TY3 774 aa21.8■■□□□ 1.08
C2orf88-207ENST00000478197 SLAIN2Q9P270 581 aa21.78■■□□□ 1.08
C2orf88-207ENST00000478197 NEXMIFQ5QGS0 1516 aa21.78■■□□□ 1.08
C2orf88-207ENST00000478197 XRN1Q8IZH2 1706 aaKnown RBP21.77■■□□□ 1.08
C2orf88-207ENST00000478197 DHX57Q6P158 1386 aaKnown RBP21.77■■□□□ 1.08
C2orf88-207ENST00000478197 AMOTL2Q9Y2J4 779 aa21.74■■□□□ 1.07
C2orf88-207ENST00000478197 PTPRUQ92729 1446 aa21.73■■□□□ 1.07
C2orf88-207ENST00000478197 CADPS2Q86UW7 1296 aa21.72■■□□□ 1.07
C2orf88-207ENST00000478197 C19orf44Q9H6X5 657 aa21.72■■□□□ 1.07
C2orf88-207ENST00000478197 ANKRD30BQ9BXX2 1392 aa21.72■■□□□ 1.07
C2orf88-207ENST00000478197 ATF3P18847 181 aa21.71■■□□□ 1.07
C2orf88-207ENST00000478197 PPLO60437 1756 aa21.7■■□□□ 1.06
C2orf88-207ENST00000478197 COL16A1Q07092 1604 aaPredicted RBP21.69■■□□□ 1.06
C2orf88-207ENST00000478197 CCDC144AA2RUR9 1427 aa21.69■■□□□ 1.06
C2orf88-207ENST00000478197 SETD1AO15047 1707 aaKnown RBP21.67■■□□□ 1.06
C2orf88-207ENST00000478197 METP08581 1390 aa21.67■■□□□ 1.06
C2orf88-207ENST00000478197 DCCP43146 1447 aa21.66■■□□□ 1.06
C2orf88-207ENST00000478197 AHDC1Q5TGY3 1603 aaPredicted RBP21.66■■□□□ 1.06
C2orf88-207ENST00000478197 NALCNQ8IZF0 1738 aa21.65■■□□□ 1.06
C2orf88-207ENST00000478197 JCADQ9P266 1359 aa21.64■■□□□ 1.06
C2orf88-207ENST00000478197 VGFO15240 615 aaPredicted RBP21.64■■□□□ 1.05
C2orf88-207ENST00000478197 CCER1Q8TC90 406 aaPredicted RBP21.63■■□□□ 1.05
C2orf88-207ENST00000478197 RPGRIP1LQ68CZ1 1315 aa21.62■■□□□ 1.05
C2orf88-207ENST00000478197 FOXD1Q16676 465 aa21.62■■□□□ 1.05
C2orf88-207ENST00000478197 SHPRHQ149N8 1683 aa21.62■■□□□ 1.05
C2orf88-207ENST00000478197 STAC3Q96MF2 364 aa21.6■■□□□ 1.05
C2orf88-207ENST00000478197 RGS17Q9UGC6 210 aaPredicted RBP21.6■■□□□ 1.05
C2orf88-207ENST00000478197 ADGRL3Q9HAR2 1447 aa21.59■■□□□ 1.05
C2orf88-207ENST00000478197 IFT172Q9UG01 1749 aa21.59■■□□□ 1.05
C2orf88-207ENST00000478197 NHSL1Q5SYE7 1610 aa21.58■■□□□ 1.05
C2orf88-207ENST00000478197 TIMELESSQ9UNS1 1208 aa21.58■■□□□ 1.05
C2orf88-207ENST00000478197 MST1RQ04912 1400 aa21.57■■□□□ 1.04
C2orf88-207ENST00000478197 ASXL1Q8IXJ9 1541 aa21.57■■□□□ 1.04
C2orf88-207ENST00000478197 PTCH1Q13635 1447 aa21.56■■□□□ 1.04
C2orf88-207ENST00000478197 BRINP3Q76B58 766 aa21.56■■□□□ 1.04
C2orf88-207ENST00000478197 SPATA31A6Q5VVP1 1343 aa21.55■■□□□ 1.04
C2orf88-207ENST00000478197 SPATA31E1Q6ZUB1 1445 aa21.52■■□□□ 1.04
C2orf88-207ENST00000478197 PRAG1Q86YV5 1406 aa21.52■■□□□ 1.04
C2orf88-207ENST00000478197 LRP6O75581 1613 aa21.5■■□□□ 1.03
C2orf88-207ENST00000478197 ROBO2Q9HCK4 1378 aa21.49■■□□□ 1.03
C2orf88-207ENST00000478197 RGL3Q3MIN7 710 aa21.49■■□□□ 1.03
C2orf88-207ENST00000478197 POTEAQ6S8J7 498 aa21.49■■□□□ 1.03
C2orf88-207ENST00000478197 MEX3CQ5U5Q3 659 aaKnown RBP21.48■■□□□ 1.03
C2orf88-207ENST00000478197 LAMC1P11047 1609 aa21.46■■□□□ 1.03
C2orf88-207ENST00000478197 KNDC1Q76NI1 1749 aa21.46■■□□□ 1.03
C2orf88-207ENST00000478197 C1orf167Q5SNV9 1468 aa21.45■■□□□ 1.03
C2orf88-207ENST00000478197 ADGRF5Q8IZF2 1346 aa21.45■■□□□ 1.02
C2orf88-207ENST00000478197 LRRC59Q96AG4 307 aaKnown RBP21.44■■□□□ 1.02
C2orf88-207ENST00000478197 TONSLQ96HA7 1378 aa21.44■■□□□ 1.02
C2orf88-207ENST00000478197 SIN3AQ96ST3 1273 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms