RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CERKQ8TCT0 537 aa7.87□□□□□ -1.15
SF3B6-202ENST00000478050 ZNF516Q92618 1163 aa7.87□□□□□ -1.15
SF3B6-202ENST00000478050 PCGF6Q9BYE7 350 aa7.87□□□□□ -1.15
SF3B6-202ENST00000478050 PNMA3Q9UL41 463 aa7.87□□□□□ -1.15
SF3B6-202ENST00000478050 PLCB2Q00722 1185 aa7.86□□□□□ -1.15
SF3B6-202ENST00000478050 TATDN2Q93075 761 aa7.86□□□□□ -1.15
SF3B6-202ENST00000478050 SPDYE16A6NNV3 312 aaPredicted RBP7.85□□□□□ -1.15
SF3B6-202ENST00000478050 SOCS7O14512 581 aa7.85□□□□□ -1.15
SF3B6-202ENST00000478050 PEG3Q9GZU2 1588 aa7.84□□□□□ -1.15
SF3B6-202ENST00000478050 WDR62O43379 1518 aa7.84□□□□□ -1.15
SF3B6-202ENST00000478050 ARAP1Q96P48 1450 aa7.84□□□□□ -1.15
SF3B6-202ENST00000478050 FBXO41Q8TF61 875 aa7.84□□□□□ -1.15
SF3B6-202ENST00000478050 HAP1P54257 671 aaPredicted RBP7.83□□□□□ -1.16
SF3B6-202ENST00000478050 TRIM26Q12899 539 aaPredicted RBP7.83□□□□□ -1.16
SF3B6-202ENST00000478050 PDIA6Q15084 440 aa7.83□□□□□ -1.16
SF3B6-202ENST00000478050 NECTIN2Q92692 538 aa7.83□□□□□ -1.16
SF3B6-202ENST00000478050 FAM198AQ9UFP1 575 aa7.83□□□□□ -1.16
SF3B6-202ENST00000478050 CCDC88BA6NC98 1476 aa7.82□□□□□ -1.16
SF3B6-202ENST00000478050 APLP1P51693 650 aa7.82□□□□□ -1.16
SF3B6-202ENST00000478050 NKX2-3Q8TAU0 364 aa7.82□□□□□ -1.16
SF3B6-202ENST00000478050 HMGXB3Q12766 1538 aa7.82□□□□□ -1.16
SF3B6-202ENST00000478050 GRXCR2A6NFK2 248 aa7.81□□□□□ -1.16
SF3B6-202ENST00000478050 COPS2P61201 443 aa7.81□□□□□ -1.16
SF3B6-202ENST00000478050 NUDT18Q6ZVK8 323 aa7.81□□□□□ -1.16
SF3B6-202ENST00000478050 ZNF775Q96BV0 537 aaPredicted RBP7.81□□□□□ -1.16
SF3B6-202ENST00000478050 ATAD2BQ9ULI0 1458 aa7.81□□□□□ -1.16
SF3B6-202ENST00000478050 SLC4A3P48751 1232 aa7.8□□□□□ -1.16
SF3B6-202ENST00000478050 C3orf80F5H4A9 247 aa7.79□□□□□ -1.16
SF3B6-202ENST00000478050 TMUB1Q9BVT8 246 aa7.79□□□□□ -1.16
SF3B6-202ENST00000478050 LOC100996750A0A140TA64 210 aa7.78□□□□□ -1.16
SF3B6-202ENST00000478050 SLF2Q8IX21 1173 aa7.78□□□□□ -1.16
SF3B6-202ENST00000478050 KRTAP4-6Q9BYQ5 205 aa7.78□□□□□ -1.16
SF3B6-202ENST00000478050 FAM9AQ8IZU1 332 aaPredicted RBP7.77□□□□□ -1.17
SF3B6-202ENST00000478050 ABCC8Q09428 1581 aa7.76□□□□□ -1.17
SF3B6-202ENST00000478050 PKDCCQ504Y2 493 aa7.76□□□□□ -1.17
SF3B6-202ENST00000478050 SWT1Q5T5J6 900 aaKnown RBP7.76□□□□□ -1.17
SF3B6-202ENST00000478050 ERCC6L2Q5T890 1561 aa7.76□□□□□ -1.17
SF3B6-202ENST00000478050 ZPR1O75312 459 aa7.75□□□□□ -1.17
SF3B6-202ENST00000478050 SLC19A1P41440 591 aa7.75□□□□□ -1.17
SF3B6-202ENST00000478050 RBM27Q9P2N5 1060 aaKnown RBP7.75□□□□□ -1.17
SF3B6-202ENST00000478050 PRIM1P49642 420 aaKnown RBP7.74□□□□□ -1.17
SF3B6-202ENST00000478050 EEA1Q15075 1411 aa7.74□□□□□ -1.17
SF3B6-202ENST00000478050 E2F4Q16254 413 aa7.73□□□□□ -1.17
SF3B6-202ENST00000478050 PRR14Q9BWN1 585 aa7.73□□□□□ -1.17
SF3B6-202ENST00000478050 CDHR5Q9HBB8 845 aa7.73□□□□□ -1.17
SF3B6-202ENST00000478050 PCDHB3Q9Y5E6 796 aa7.73□□□□□ -1.17
SF3B6-202ENST00000478050 BAZ1BQ9UIG0 1483 aaKnown RBP7.73□□□□□ -1.17
SF3B6-202ENST00000478050 DGAT1O75907 488 aa7.72□□□□□ -1.17
SF3B6-202ENST00000478050 WDR70Q9NW82 654 aa7.72□□□□□ -1.17
SF3B6-202ENST00000478050 CEP164Q9UPV0 1460 aa7.7□□□□□ -1.18
SF3B6-202ENST00000478050 RNF223E7ERA6 249 aa7.7□□□□□ -1.18
SF3B6-202ENST00000478050 OSBPP22059 807 aa7.7□□□□□ -1.18
SF3B6-202ENST00000478050 ZEB1P37275 1124 aaPredicted RBP7.7□□□□□ -1.18
SF3B6-202ENST00000478050 MYT1Q01538 1121 aa7.7□□□□□ -1.18
SF3B6-202ENST00000478050 PADI6Q6TGC4 694 aa7.7□□□□□ -1.18
SF3B6-202ENST00000478050 TRIM67Q6ZTA4 783 aa7.69□□□□□ -1.18
SF3B6-202ENST00000478050 ZNF598Q86UK7 904 aaKnown RBP7.69□□□□□ -1.18
SF3B6-202ENST00000478050 DISP3Q9P2K9 1392 aa7.69□□□□□ -1.18
SF3B6-202ENST00000478050 CADPSQ9ULU8 1353 aa7.69□□□□□ -1.18
SF3B6-202ENST00000478050 SPRYD7Q5W111 196 aa7.68□□□□□ -1.18
SF3B6-202ENST00000478050 ILDR2Q71H61 639 aa7.68□□□□□ -1.18
SF3B6-202ENST00000478050 FAM187AA6NFU0 413 aa7.67□□□□□ -1.18
SF3B6-202ENST00000478050 BLOC1S3Q6QNY0 202 aa7.67□□□□□ -1.18
SF3B6-202ENST00000478050 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
SF3B6-202ENST00000478050 BBXQ8WY36 941 aaPredicted RBP7.67□□□□□ -1.18
SF3B6-202ENST00000478050 ARIH1Q9Y4X5 557 aaPredicted RBP7.67□□□□□ -1.18
SF3B6-202ENST00000478050 WRNQ14191 1432 aaPredicted RBP eCLIP7.67□□□□□ -1.18
SF3B6-202ENST00000478050 POTECB2RU33 542 aa7.66□□□□□ -1.18
SF3B6-202ENST00000478050 PRR20EP86478 221 aa7.66□□□□□ -1.18
SF3B6-202ENST00000478050 PRR20CP86479 221 aa7.66□□□□□ -1.18
SF3B6-202ENST00000478050 PRR20DP86480 221 aa7.66□□□□□ -1.18
SF3B6-202ENST00000478050 PRR20BP86481 221 aa7.66□□□□□ -1.18
SF3B6-202ENST00000478050 PRR20AP86496 221 aa7.66□□□□□ -1.18
SF3B6-202ENST00000478050 ANKLE1Q8NAG6 615 aa7.66□□□□□ -1.18
SF3B6-202ENST00000478050 BCANQ96GW7 911 aa7.66□□□□□ -1.18
SF3B6-202ENST00000478050 KIF21BO75037 1637 aa7.66□□□□□ -1.18
SF3B6-202ENST00000478050 SYNJ1O43426 1573 aa7.65□□□□□ -1.18
SF3B6-202ENST00000478050 ZNF697Q5TEC3 545 aa7.65□□□□□ -1.18
SF3B6-202ENST00000478050 TNIKQ9UKE5 1360 aa7.65□□□□□ -1.18
SF3B6-202ENST00000478050 GOLGA3Q08378 1498 aa7.64□□□□□ -1.19
SF3B6-202ENST00000478050 SOGA1O94964 1423 aa7.64□□□□□ -1.19
SF3B6-202ENST00000478050 TNFRSF10AO00220 468 aa7.64□□□□□ -1.19
SF3B6-202ENST00000478050 PPEF1O14829 653 aaPredicted RBP7.64□□□□□ -1.19
SF3B6-202ENST00000478050 PPARGC1BQ86YN6 1023 aaKnown RBP7.64□□□□□ -1.19
SF3B6-202ENST00000478050 SPRYD3Q8NCJ5 442 aa7.64□□□□□ -1.19
SF3B6-202ENST00000478050 EMID1Q96A84 441 aaPredicted RBP7.64□□□□□ -1.19
SF3B6-202ENST00000478050 EYA1Q99502 592 aa7.64□□□□□ -1.19
SF3B6-202ENST00000478050 NPDC1Q9NQX5 325 aaPredicted RBP7.64□□□□□ -1.19
SF3B6-202ENST00000478050 PRDM2Q13029 1718 aa7.64□□□□□ -1.19
SF3B6-202ENST00000478050 BIVM-ERCC5R4GMW8 1640 aa7.63□□□□□ -1.19
SF3B6-202ENST00000478050 HECW2Q9P2P5 1572 aa7.63□□□□□ -1.19
SF3B6-202ENST00000478050 CEP162Q5TB80 1403 aa7.63□□□□□ -1.19
SF3B6-202ENST00000478050 TLL1O43897 1013 aa7.63□□□□□ -1.19
SF3B6-202ENST00000478050 KMT5BQ4FZB7 885 aa7.63□□□□□ -1.19
SF3B6-202ENST00000478050 LIAT1Q6ZQX7 453 aa7.63□□□□□ -1.19
SF3B6-202ENST00000478050 VSIG10Q8N0Z9 540 aa7.63□□□□□ -1.19
SF3B6-202ENST00000478050 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.63□□□□□ -1.19
SF3B6-202ENST00000478050 S1PR4O95977 384 aa7.62□□□□□ -1.19
SF3B6-202ENST00000478050 TOP2BQ02880 1626 aa7.61□□□□□ -1.19
SF3B6-202ENST00000478050 DNAJB2P25686 324 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms