RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 ANKRD30BQ9BXX2 1392 aa26.16■■□□□ 1.78
SMIM4-202ENST00000476842 POLR1AO95602 1720 aaPredicted RBP26.16■■□□□ 1.78
SMIM4-202ENST00000476842 PPP1R15AO75807 674 aaPredicted RBP26.15■■□□□ 1.78
SMIM4-202ENST00000476842 RPGRIP1LQ68CZ1 1315 aa26.13■■□□□ 1.77
SMIM4-202ENST00000476842 NUTM2DQ5VT03 806 aaPredicted RBP26.12■■□□□ 1.77
SMIM4-202ENST00000476842 PLEKHG1Q9ULL1 1385 aa26.11■■□□□ 1.77
SMIM4-202ENST00000476842 ZNF335Q9H4Z2 1342 aaPredicted RBP26.11■■□□□ 1.77
SMIM4-202ENST00000476842 BCANQ96GW7 911 aa26.1■■□□□ 1.77
SMIM4-202ENST00000476842 MYO5BQ9ULV0 1848 aa26.09■■□□□ 1.77
SMIM4-202ENST00000476842 IQGAP1P46940 1657 aa26.09■■□□□ 1.77
SMIM4-202ENST00000476842 SPATA31E1Q6ZUB1 1445 aa26.07■■□□□ 1.76
SMIM4-202ENST00000476842 RGL3Q3MIN7 710 aa26.07■■□□□ 1.76
SMIM4-202ENST00000476842 SLC26A8Q96RN1 970 aa26.07■■□□□ 1.76
SMIM4-202ENST00000476842 VGFO15240 615 aaPredicted RBP26.06■■□□□ 1.76
SMIM4-202ENST00000476842 KIF1BO60333 1816 aa26.05■■□□□ 1.76
SMIM4-202ENST00000476842 TBX22Q9Y458 520 aa26.05■■□□□ 1.76
SMIM4-202ENST00000476842 CERKQ8TCT0 537 aa26.04■■□□□ 1.76
SMIM4-202ENST00000476842 PCGF6Q9BYE7 350 aa26.04■■□□□ 1.76
SMIM4-202ENST00000476842 SENP3Q9H4L4 574 aaPredicted RBP26.03■■□□□ 1.76
SMIM4-202ENST00000476842 LTBP4Q8N2S1 1624 aa26.03■■□□□ 1.76
SMIM4-202ENST00000476842 NEXMIFQ5QGS0 1516 aa26.02■■□□□ 1.76
SMIM4-202ENST00000476842 DHX57Q6P158 1386 aaKnown RBP25.98■■□□□ 1.75
SMIM4-202ENST00000476842 ADAMTS13Q76LX8 1427 aa25.97■■□□□ 1.75
SMIM4-202ENST00000476842 KCNA6P17658 529 aa25.97■■□□□ 1.75
SMIM4-202ENST00000476842 CPS1P31327 1500 aa25.93■■□□□ 1.74
SMIM4-202ENST00000476842 ADGRF5Q8IZF2 1346 aa25.92■■□□□ 1.74
SMIM4-202ENST00000476842 SETBP1Q9Y6X0 1596 aa25.91■■□□□ 1.74
SMIM4-202ENST00000476842 PIK3R4Q99570 1358 aa25.91■■□□□ 1.74
SMIM4-202ENST00000476842 STAC3Q96MF2 364 aa25.89■■□□□ 1.74
SMIM4-202ENST00000476842 DIP2AQ14689 1571 aa25.89■■□□□ 1.73
SMIM4-202ENST00000476842 SIN3AQ96ST3 1273 aa25.87■■□□□ 1.73
SMIM4-202ENST00000476842 PPLO60437 1756 aa25.87■■□□□ 1.73
SMIM4-202ENST00000476842 IQSEC2Q5JU85 1478 aa25.86■■□□□ 1.73
SMIM4-202ENST00000476842 DCAF11Q8TEB1 546 aa25.86■■□□□ 1.73
SMIM4-202ENST00000476842 NRXN3Q9Y4C0 1643 aa25.85■■□□□ 1.73
SMIM4-202ENST00000476842 AMOTL2Q9Y2J4 779 aa25.85■■□□□ 1.73
SMIM4-202ENST00000476842 METP08581 1390 aa25.84■■□□□ 1.73
SMIM4-202ENST00000476842 PROSER2Q86WR7 435 aaPredicted RBP25.84■■□□□ 1.73
SMIM4-202ENST00000476842 LRRC7Q96NW7 1537 aa25.83■■□□□ 1.73
SMIM4-202ENST00000476842 KDM2AQ9Y2K7 1162 aa25.83■■□□□ 1.73
SMIM4-202ENST00000476842 STRCP1A6NGW2 1772 aa25.82■■□□□ 1.72
SMIM4-202ENST00000476842 FBXO41Q8TF61 875 aa25.82■■□□□ 1.72
SMIM4-202ENST00000476842 PTPRUQ92729 1446 aa25.81■■□□□ 1.72
SMIM4-202ENST00000476842 MYOM2P54296 1465 aa25.81■■□□□ 1.72
SMIM4-202ENST00000476842 NRXN1Q9ULB1 1477 aa25.8■■□□□ 1.72
SMIM4-202ENST00000476842 NEUROD1Q13562 356 aa25.8■■□□□ 1.72
SMIM4-202ENST00000476842 C14orf93Q9H972 538 aaKnown RBP25.8■■□□□ 1.72
SMIM4-202ENST00000476842 ALKQ9UM73 1620 aa25.8■■□□□ 1.72
SMIM4-202ENST00000476842 IFT172Q9UG01 1749 aa25.8■■□□□ 1.72
SMIM4-202ENST00000476842 PIK3C2GO75747 1445 aa25.8■■□□□ 1.72
SMIM4-202ENST00000476842 NWD1Q149M9 1564 aa25.79■■□□□ 1.72
SMIM4-202ENST00000476842 NKTRP30414 1462 aaKnown RBP25.79■■□□□ 1.72
SMIM4-202ENST00000476842 CHD2O14647 1828 aaKnown RBP25.77■■□□□ 1.72
SMIM4-202ENST00000476842 TMEM94Q12767 1356 aa25.77■■□□□ 1.72
SMIM4-202ENST00000476842 CFAP70Q5T0N1 1121 aa25.75■■□□□ 1.71
SMIM4-202ENST00000476842 L3MBTL2Q969R5 705 aa25.74■■□□□ 1.71
SMIM4-202ENST00000476842 RBM33Q96EV2 1170 aaKnown RBP25.74■■□□□ 1.71
SMIM4-202ENST00000476842 UBAP1LF5GYI3 381 aa25.72■■□□□ 1.71
SMIM4-202ENST00000476842 TMEM132EQ6IEE7 984 aa25.72■■□□□ 1.71
SMIM4-202ENST00000476842 NCOA3Q9Y6Q9 1424 aa25.71■■□□□ 1.71
SMIM4-202ENST00000476842 TOM1O60784 492 aa25.7■■□□□ 1.7
SMIM4-202ENST00000476842 ILDR1Q86SU0 546 aaPredicted RBP25.69■■□□□ 1.7
SMIM4-202ENST00000476842 SETD1AO15047 1707 aaKnown RBP25.68■■□□□ 1.7
SMIM4-202ENST00000476842 LRPPRCP42704 1394 aaKnown RBP25.67■■□□□ 1.7
SMIM4-202ENST00000476842 CLSPNQ9HAW4 1339 aa25.66■■□□□ 1.7
SMIM4-202ENST00000476842 PRAG1Q86YV5 1406 aa25.66■■□□□ 1.7
SMIM4-202ENST00000476842 STK26Q9P289 416 aa25.66■■□□□ 1.7
SMIM4-202ENST00000476842 ABCC11Q96J66 1382 aa25.66■■□□□ 1.7
SMIM4-202ENST00000476842 XRN1Q8IZH2 1706 aaKnown RBP25.66■■□□□ 1.7
SMIM4-202ENST00000476842 C19orf44Q9H6X5 657 aa25.64■■□□□ 1.7
SMIM4-202ENST00000476842 ROBO2Q9HCK4 1378 aa25.64■■□□□ 1.69
SMIM4-202ENST00000476842 C14orf37Q86TY3 774 aa25.63■■□□□ 1.69
SMIM4-202ENST00000476842 SIRT1Q96EB6 747 aa25.63■■□□□ 1.69
SMIM4-202ENST00000476842 MSH6P52701 1360 aa25.63■■□□□ 1.69
SMIM4-202ENST00000476842 PTCH1Q13635 1447 aa25.63■■□□□ 1.69
SMIM4-202ENST00000476842 YTHDC2Q9H6S0 1430 aaKnown RBP25.63■■□□□ 1.69
SMIM4-202ENST00000476842 ASXL1Q8IXJ9 1541 aa25.62■■□□□ 1.69
SMIM4-202ENST00000476842 TECPR2O15040 1411 aa25.61■■□□□ 1.69
SMIM4-202ENST00000476842 TONSLQ96HA7 1378 aa25.6■■□□□ 1.69
SMIM4-202ENST00000476842 XIRP1Q702N8 1843 aaKnown RBP25.6■■□□□ 1.69
SMIM4-202ENST00000476842 LAMC1P11047 1609 aa25.59■■□□□ 1.69
SMIM4-202ENST00000476842 CCER1Q8TC90 406 aaPredicted RBP25.59■■□□□ 1.69
SMIM4-202ENST00000476842 PIP4K2BP78356 416 aa25.57■■□□□ 1.68
SMIM4-202ENST00000476842 WAPLQ7Z5K2 1190 aa25.57■■□□□ 1.68
SMIM4-202ENST00000476842 ATF3P18847 181 aa25.56■■□□□ 1.68
SMIM4-202ENST00000476842 CADPS2Q86UW7 1296 aa25.56■■□□□ 1.68
SMIM4-202ENST00000476842 ADGRB1O14514 1584 aa25.56■■□□□ 1.68
SMIM4-202ENST00000476842 NBPF1Q3BBV0 1214 aa25.54■■□□□ 1.68
SMIM4-202ENST00000476842 SLAIN2Q9P270 581 aa25.54■■□□□ 1.68
SMIM4-202ENST00000476842 FAM135BQ49AJ0 1406 aa25.54■■□□□ 1.68
SMIM4-202ENST00000476842 ADGRL3Q9HAR2 1447 aa25.53■■□□□ 1.68
SMIM4-202ENST00000476842 TIMELESSQ9UNS1 1208 aa25.52■■□□□ 1.68
SMIM4-202ENST00000476842 TRAK1Q9UPV9 953 aa25.52■■□□□ 1.68
SMIM4-202ENST00000476842 SCAF1Q9H7N4 1312 aaKnown RBP25.52■■□□□ 1.68
SMIM4-202ENST00000476842 NBPF8Q3BBV2 869 aa25.51■■□□□ 1.67
SMIM4-202ENST00000476842 DCCP43146 1447 aa25.5■■□□□ 1.67
SMIM4-202ENST00000476842 PRAM1Q96QH2 718 aa25.5■■□□□ 1.67
SMIM4-202ENST00000476842 PLEKHH1Q9ULM0 1364 aa25.5■■□□□ 1.67
SMIM4-202ENST00000476842 POGKQ9P215 609 aa25.48■■□□□ 1.67
SMIM4-202ENST00000476842 DLC1Q96QB1 1528 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms