RNA–Protein interactions for RNA: ENST00000476439.1

GRTP1-204, Transcript of growth hormone regulated TBC protein 1, humanhuman

TSL 2

Gene GRTP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRTP1-204ENST00000476439 PLEKHG1Q9ULL1 1385 aa28.46■■■□□ 2.15
GRTP1-204ENST00000476439 ZNF335Q9H4Z2 1342 aaPredicted RBP28.45■■■□□ 2.15
GRTP1-204ENST00000476439 CHGAP10645 457 aaKnown RBP28.45■■■□□ 2.14
GRTP1-204ENST00000476439 CCDC144AA2RUR9 1427 aa28.44■■■□□ 2.14
GRTP1-204ENST00000476439 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.42■■■□□ 2.14
GRTP1-204ENST00000476439 CPS1P31327 1500 aa28.42■■■□□ 2.14
GRTP1-204ENST00000476439 IQSEC2Q5JU85 1478 aa28.41■■■□□ 2.14
GRTP1-204ENST00000476439 HDGFP51858 240 aaKnown RBP28.41■■■□□ 2.14
GRTP1-204ENST00000476439 SPATA31E1Q6ZUB1 1445 aa28.4■■■□□ 2.14
GRTP1-204ENST00000476439 STRCP1A6NGW2 1772 aa28.39■■■□□ 2.14
GRTP1-204ENST00000476439 TRIM26Q12899 539 aaPredicted RBP28.39■■■□□ 2.14
GRTP1-204ENST00000476439 DIP2AQ14689 1571 aa28.39■■■□□ 2.14
GRTP1-204ENST00000476439 CERKQ8TCT0 537 aa28.38■■■□□ 2.13
GRTP1-204ENST00000476439 SETBP1Q9Y6X0 1596 aa28.37■■■□□ 2.13
GRTP1-204ENST00000476439 NRXN3Q9Y4C0 1643 aa28.36■■■□□ 2.13
GRTP1-204ENST00000476439 PPLO60437 1756 aa28.36■■■□□ 2.13
GRTP1-204ENST00000476439 ANKRD30BQ9BXX2 1392 aa28.36■■■□□ 2.13
GRTP1-204ENST00000476439 NWD1Q149M9 1564 aa28.35■■■□□ 2.13
GRTP1-204ENST00000476439 ADAMTS13Q76LX8 1427 aa28.35■■■□□ 2.13
GRTP1-204ENST00000476439 PPP1R15AO75807 674 aaPredicted RBP28.34■■■□□ 2.13
GRTP1-204ENST00000476439 IFT172Q9UG01 1749 aa28.34■■■□□ 2.13
GRTP1-204ENST00000476439 ZNF326Q5BKZ1 582 aaKnown RBP28.31■■■□□ 2.12
GRTP1-204ENST00000476439 RPGRIP1LQ68CZ1 1315 aa28.31■■■□□ 2.12
GRTP1-204ENST00000476439 SLC26A8Q96RN1 970 aa28.28■■■□□ 2.12
GRTP1-204ENST00000476439 NUTM2DQ5VT03 806 aaPredicted RBP28.27■■■□□ 2.12
GRTP1-204ENST00000476439 TBX22Q9Y458 520 aa28.26■■■□□ 2.11
GRTP1-204ENST00000476439 CHD2O14647 1828 aaKnown RBP28.26■■■□□ 2.11
GRTP1-204ENST00000476439 NKTRP30414 1462 aaKnown RBP28.26■■■□□ 2.11
GRTP1-204ENST00000476439 LRRC7Q96NW7 1537 aa28.25■■■□□ 2.11
GRTP1-204ENST00000476439 PIK3R4Q99570 1358 aa28.24■■■□□ 2.11
GRTP1-204ENST00000476439 SETD1AO15047 1707 aaKnown RBP28.23■■■□□ 2.11
GRTP1-204ENST00000476439 FBXO41Q8TF61 875 aa28.21■■■□□ 2.11
GRTP1-204ENST00000476439 VGFO15240 615 aaPredicted RBP28.2■■■□□ 2.1
GRTP1-204ENST00000476439 KCNA6P17658 529 aa28.2■■■□□ 2.1
GRTP1-204ENST00000476439 BCANQ96GW7 911 aa28.2■■■□□ 2.1
GRTP1-204ENST00000476439 XIRP1Q702N8 1843 aaKnown RBP28.19■■■□□ 2.1
GRTP1-204ENST00000476439 MYOM2P54296 1465 aa28.19■■■□□ 2.1
GRTP1-204ENST00000476439 XRN1Q8IZH2 1706 aaKnown RBP28.18■■■□□ 2.1
GRTP1-204ENST00000476439 NRXN1Q9ULB1 1477 aa28.16■■■□□ 2.1
GRTP1-204ENST00000476439 ALKQ9UM73 1620 aa28.15■■■□□ 2.1
GRTP1-204ENST00000476439 RGL3Q3MIN7 710 aa28.14■■■□□ 2.1
GRTP1-204ENST00000476439 SENP3Q9H4L4 574 aaPredicted RBP28.14■■■□□ 2.1
GRTP1-204ENST00000476439 PTPRUQ92729 1446 aa28.14■■■□□ 2.1
GRTP1-204ENST00000476439 PIK3C2GO75747 1445 aa28.13■■■□□ 2.09
GRTP1-204ENST00000476439 DHX57Q6P158 1386 aaKnown RBP28.12■■■□□ 2.09
GRTP1-204ENST00000476439 METP08581 1390 aa28.11■■■□□ 2.09
GRTP1-204ENST00000476439 PRAG1Q86YV5 1406 aa28.11■■■□□ 2.09
GRTP1-204ENST00000476439 ILDR1Q86SU0 546 aaPredicted RBP28.11■■■□□ 2.09
GRTP1-204ENST00000476439 ADGRF5Q8IZF2 1346 aa28.11■■■□□ 2.09
GRTP1-204ENST00000476439 TMEM94Q12767 1356 aa28.08■■■□□ 2.09
GRTP1-204ENST00000476439 LAMC1P11047 1609 aa28.07■■■□□ 2.08
GRTP1-204ENST00000476439 NCOA3Q9Y6Q9 1424 aa28.05■■■□□ 2.08
GRTP1-204ENST00000476439 ASXL1Q8IXJ9 1541 aa28.04■■■□□ 2.08
GRTP1-204ENST00000476439 AMOTL2Q9Y2J4 779 aa28.02■■■□□ 2.08
GRTP1-204ENST00000476439 PTCH1Q13635 1447 aa28.01■■■□□ 2.08
GRTP1-204ENST00000476439 PROSER2Q86WR7 435 aaPredicted RBP28.01■■■□□ 2.07
GRTP1-204ENST00000476439 STAC3Q96MF2 364 aa27.99■■■□□ 2.07
GRTP1-204ENST00000476439 UBAP1LF5GYI3 381 aa27.98■■■□□ 2.07
GRTP1-204ENST00000476439 KNDC1Q76NI1 1749 aa27.98■■■□□ 2.07
GRTP1-204ENST00000476439 TECPR2O15040 1411 aa27.96■■■□□ 2.07
GRTP1-204ENST00000476439 TOM1O60784 492 aa27.95■■■□□ 2.06
GRTP1-204ENST00000476439 C14orf93Q9H972 538 aaKnown RBP27.94■■■□□ 2.06
GRTP1-204ENST00000476439 ADGRB1O14514 1584 aa27.92■■■□□ 2.06
GRTP1-204ENST00000476439 MSH6P52701 1360 aa27.92■■■□□ 2.06
GRTP1-204ENST00000476439 DCAF11Q8TEB1 546 aa27.92■■■□□ 2.06
GRTP1-204ENST00000476439 RBM33Q96EV2 1170 aaKnown RBP27.92■■■□□ 2.06
GRTP1-204ENST00000476439 LRPPRCP42704 1394 aaKnown RBP27.91■■■□□ 2.06
GRTP1-204ENST00000476439 NALCNQ8IZF0 1738 aa27.9■■■□□ 2.06
GRTP1-204ENST00000476439 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.9■■■□□ 2.06
GRTP1-204ENST00000476439 ROBO2Q9HCK4 1378 aa27.9■■■□□ 2.06
GRTP1-204ENST00000476439 DCCP43146 1447 aa27.9■■■□□ 2.06
GRTP1-204ENST00000476439 PCGF6Q9BYE7 350 aa27.88■■■□□ 2.05
GRTP1-204ENST00000476439 YTHDC2Q9H6S0 1430 aaKnown RBP27.88■■■□□ 2.05
GRTP1-204ENST00000476439 ABCC11Q96J66 1382 aa27.87■■■□□ 2.05
GRTP1-204ENST00000476439 KIAA1210Q9ULL0 1709 aa27.87■■■□□ 2.05
GRTP1-204ENST00000476439 ADGRL3Q9HAR2 1447 aa27.87■■■□□ 2.05
GRTP1-204ENST00000476439 SIN3AQ96ST3 1273 aa27.87■■■□□ 2.05
GRTP1-204ENST00000476439 CFAP70Q5T0N1 1121 aa27.86■■■□□ 2.05
GRTP1-204ENST00000476439 KDM2AQ9Y2K7 1162 aa27.84■■■□□ 2.05
GRTP1-204ENST00000476439 DLC1Q96QB1 1528 aa27.82■■■□□ 2.04
GRTP1-204ENST00000476439 TMEM132EQ6IEE7 984 aa27.82■■■□□ 2.04
GRTP1-204ENST00000476439 C19orf44Q9H6X5 657 aa27.82■■■□□ 2.04
GRTP1-204ENST00000476439 FAM135BQ49AJ0 1406 aa27.81■■■□□ 2.04
GRTP1-204ENST00000476439 L3MBTL2Q969R5 705 aa27.79■■■□□ 2.04
GRTP1-204ENST00000476439 ROBO1Q9Y6N7 1651 aa27.78■■■□□ 2.04
GRTP1-204ENST00000476439 CDC42BPGQ6DT37 1551 aa27.77■■■□□ 2.04
GRTP1-204ENST00000476439 PIP4K2BP78356 416 aa27.77■■■□□ 2.04
GRTP1-204ENST00000476439 C14orf37Q86TY3 774 aa27.77■■■□□ 2.04
GRTP1-204ENST00000476439 CADPS2Q86UW7 1296 aa27.77■■■□□ 2.04
GRTP1-204ENST00000476439 SIRT1Q96EB6 747 aa27.77■■■□□ 2.04
GRTP1-204ENST00000476439 NEUROD1Q13562 356 aa27.75■■■□□ 2.03
GRTP1-204ENST00000476439 STK26Q9P289 416 aa27.74■■■□□ 2.03
GRTP1-204ENST00000476439 MST1RQ04912 1400 aa27.74■■■□□ 2.03
GRTP1-204ENST00000476439 PLEKHH1Q9ULM0 1364 aa27.73■■■□□ 2.03
GRTP1-204ENST00000476439 SCAF1Q9H7N4 1312 aaKnown RBP27.72■■■□□ 2.03
GRTP1-204ENST00000476439 TRPM1Q7Z4N2 1603 aa27.72■■■□□ 2.03
GRTP1-204ENST00000476439 ATF3P18847 181 aa27.72■■■□□ 2.03
GRTP1-204ENST00000476439 SLAIN2Q9P270 581 aa27.72■■■□□ 2.03
GRTP1-204ENST00000476439 ARHGEF28Q8N1W1 1705 aaKnown RBP27.71■■■□□ 2.03
GRTP1-204ENST00000476439 CLSPNQ9HAW4 1339 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms