RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 PROSER2Q86WR7 435 aaPredicted RBP17.34■□□□□ 0.37
EXOSC1-208ENST00000476234 ANKRD30AQ9BXX3 1397 aa17.34■□□□□ 0.37
EXOSC1-208ENST00000476234 SLC52A1Q9NWF4 448 aa17.33■□□□□ 0.36
EXOSC1-208ENST00000476234 RPRD2Q5VT52 1461 aaKnown RBP17.31■□□□□ 0.36
EXOSC1-208ENST00000476234 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
EXOSC1-208ENST00000476234 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
EXOSC1-208ENST00000476234 ADGRL2O95490 1459 aa17.3■□□□□ 0.36
EXOSC1-208ENST00000476234 SLAIN2Q9P270 581 aa17.29■□□□□ 0.36
EXOSC1-208ENST00000476234 MSH6P52701 1360 aa17.28■□□□□ 0.36
EXOSC1-208ENST00000476234 PLEKHG1Q9ULL1 1385 aa17.28■□□□□ 0.36
EXOSC1-208ENST00000476234 CHD2O14647 1828 aaKnown RBP17.27■□□□□ 0.36
EXOSC1-208ENST00000476234 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.36
EXOSC1-208ENST00000476234 JCADQ9P266 1359 aa17.27■□□□□ 0.35
EXOSC1-208ENST00000476234 NCOA3Q9Y6Q9 1424 aa17.26■□□□□ 0.35
EXOSC1-208ENST00000476234 PHLPP1O60346 1717 aa17.25■□□□□ 0.35
EXOSC1-208ENST00000476234 APLP2Q06481 763 aa17.25■□□□□ 0.35
EXOSC1-208ENST00000476234 COL16A1Q07092 1604 aaPredicted RBP17.25■□□□□ 0.35
EXOSC1-208ENST00000476234 TMEM131LA2VDJ0 1609 aa17.24■□□□□ 0.35
EXOSC1-208ENST00000476234 TBX22Q9Y458 520 aa17.23■□□□□ 0.35
EXOSC1-208ENST00000476234 ANKRD50Q9ULJ7 1429 aa17.22■□□□□ 0.35
EXOSC1-208ENST00000476234 RIMS2Q9UQ26 1411 aa17.22■□□□□ 0.35
EXOSC1-208ENST00000476234 HDGFP51858 240 aaKnown RBP17.21■□□□□ 0.35
EXOSC1-208ENST00000476234 MYO5BQ9ULV0 1848 aa17.21■□□□□ 0.35
EXOSC1-208ENST00000476234 GCC2Q8IWJ2 1684 aa17.2■□□□□ 0.34
EXOSC1-208ENST00000476234 BCANQ96GW7 911 aa17.2■□□□□ 0.34
EXOSC1-208ENST00000476234 ADAMTS13Q76LX8 1427 aa17.2■□□□□ 0.34
EXOSC1-208ENST00000476234 SETD1AO15047 1707 aaKnown RBP17.19■□□□□ 0.34
EXOSC1-208ENST00000476234 SPATA31A6Q5VVP1 1343 aa17.19■□□□□ 0.34
EXOSC1-208ENST00000476234 LRP6O75581 1613 aa17.18■□□□□ 0.34
EXOSC1-208ENST00000476234 AHDC1Q5TGY3 1603 aaPredicted RBP17.18■□□□□ 0.34
EXOSC1-208ENST00000476234 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
EXOSC1-208ENST00000476234 UNC13BO14795 1591 aa17.17■□□□□ 0.34
EXOSC1-208ENST00000476234 DIP2AQ14689 1571 aa17.17■□□□□ 0.34
EXOSC1-208ENST00000476234 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.17■□□□□ 0.34
EXOSC1-208ENST00000476234 PPP1R15AO75807 674 aaPredicted RBP17.16■□□□□ 0.34
EXOSC1-208ENST00000476234 CACNB1Q02641 598 aaPredicted RBP17.15■□□□□ 0.34
EXOSC1-208ENST00000476234 C19orf44Q9H6X5 657 aa17.15■□□□□ 0.34
EXOSC1-208ENST00000476234 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.15■□□□□ 0.34
EXOSC1-208ENST00000476234 SHPRHQ149N8 1683 aa17.14■□□□□ 0.33
EXOSC1-208ENST00000476234 CADPS2Q86UW7 1296 aa17.14■□□□□ 0.33
EXOSC1-208ENST00000476234 ZNF772Q68DY9 489 aaPredicted RBP17.13■□□□□ 0.33
EXOSC1-208ENST00000476234 E9PCH4 1651 aa17.13■□□□□ 0.33
EXOSC1-208ENST00000476234 PPARGC1BQ86YN6 1023 aaKnown RBP17.11■□□□□ 0.33
EXOSC1-208ENST00000476234 ATF3P18847 181 aa17.1■□□□□ 0.33
EXOSC1-208ENST00000476234 FAM50AQ14320 339 aaKnown RBP17.1■□□□□ 0.33
EXOSC1-208ENST00000476234 UPF1Q92900 1129 aaKnown RBP eCLIP17.1■□□□□ 0.33
EXOSC1-208ENST00000476234 PTPRUQ92729 1446 aa17.1■□□□□ 0.33
EXOSC1-208ENST00000476234 TRPM2O94759 1503 aa17.1■□□□□ 0.33
EXOSC1-208ENST00000476234 IQGAP3Q86VI3 1631 aa17.1■□□□□ 0.33
EXOSC1-208ENST00000476234 C14orf37Q86TY3 774 aa17.09■□□□□ 0.33
EXOSC1-208ENST00000476234 DCCP43146 1447 aa17.09■□□□□ 0.33
EXOSC1-208ENST00000476234 ROCK1Q13464 1354 aa17.08■□□□□ 0.32
EXOSC1-208ENST00000476234 BRINP3Q76B58 766 aa17.08■□□□□ 0.32
EXOSC1-208ENST00000476234 CDK12Q9NYV4 1490 aaPredicted RBP17.07■□□□□ 0.32
EXOSC1-208ENST00000476234 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
EXOSC1-208ENST00000476234 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
EXOSC1-208ENST00000476234 AMOTL2Q9Y2J4 779 aa17.07■□□□□ 0.32
EXOSC1-208ENST00000476234 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
EXOSC1-208ENST00000476234 XRN1Q8IZH2 1706 aaKnown RBP17.06■□□□□ 0.32
EXOSC1-208ENST00000476234 SETD5Q9C0A6 1442 aa17.05■□□□□ 0.32
EXOSC1-208ENST00000476234 NRXN3Q9Y4C0 1643 aa17.05■□□□□ 0.32
EXOSC1-208ENST00000476234 SETBP1Q9Y6X0 1596 aa17.04■□□□□ 0.32
EXOSC1-208ENST00000476234 ASXL1Q8IXJ9 1541 aa17.04■□□□□ 0.32
EXOSC1-208ENST00000476234 RXRBP28702 533 aa17.03■□□□□ 0.32
EXOSC1-208ENST00000476234 TRIM52Q96A61 297 aa17.03■□□□□ 0.32
EXOSC1-208ENST00000476234 MST1RQ04912 1400 aa17.03■□□□□ 0.32
EXOSC1-208ENST00000476234 NHSL1Q5SYE7 1610 aa17.03■□□□□ 0.32
EXOSC1-208ENST00000476234 NUP155O75694 1391 aa17.01■□□□□ 0.31
EXOSC1-208ENST00000476234 AFF2P51816 1311 aa16.98■□□□□ 0.31
EXOSC1-208ENST00000476234 NUTM2BA6NNL0 878 aaPredicted RBP16.98■□□□□ 0.31
EXOSC1-208ENST00000476234 NUTM2EB1AL46 878 aaPredicted RBP16.98■□□□□ 0.31
EXOSC1-208ENST00000476234 NUTM2AQ8IVF1 878 aaPredicted RBP16.98■□□□□ 0.31
EXOSC1-208ENST00000476234 LRRC59Q96AG4 307 aaKnown RBP16.98■□□□□ 0.31
EXOSC1-208ENST00000476234 METP08581 1390 aa16.98■□□□□ 0.31
EXOSC1-208ENST00000476234 ADGRL3Q9HAR2 1447 aa16.96■□□□□ 0.31
EXOSC1-208ENST00000476234 PNPLA6Q8IY17 1366 aa16.96■□□□□ 0.31
EXOSC1-208ENST00000476234 SPHKAPQ2M3C7 1700 aa16.95■□□□□ 0.3
EXOSC1-208ENST00000476234 LAMC1P11047 1609 aa16.94■□□□□ 0.3
EXOSC1-208ENST00000476234 RGS12O14924 1447 aa16.94■□□□□ 0.3
EXOSC1-208ENST00000476234 RBM6P78332 1123 aaKnown RBP16.93■□□□□ 0.3
EXOSC1-208ENST00000476234 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
EXOSC1-208ENST00000476234 NEXMIFQ5QGS0 1516 aa16.92■□□□□ 0.3
EXOSC1-208ENST00000476234 ITGAEP38570 1179 aa16.92■□□□□ 0.3
EXOSC1-208ENST00000476234 QTRT2Q9H974 415 aaKnown RBP16.91■□□□□ 0.3
EXOSC1-208ENST00000476234 DDX17Q92841 729 aaKnown RBP16.9■□□□□ 0.3
EXOSC1-208ENST00000476234 C1orf167Q5SNV9 1468 aa16.9■□□□□ 0.3
EXOSC1-208ENST00000476234 PRAG1Q86YV5 1406 aa16.89■□□□□ 0.29
EXOSC1-208ENST00000476234 ZNF326Q5BKZ1 582 aaKnown RBP16.89■□□□□ 0.29
EXOSC1-208ENST00000476234 C8orf37Q96NL8 207 aa16.89■□□□□ 0.29
EXOSC1-208ENST00000476234 CLTCL1P53675 1640 aa16.88■□□□□ 0.29
EXOSC1-208ENST00000476234 PTCH1Q13635 1447 aa16.88■□□□□ 0.29
EXOSC1-208ENST00000476234 SOS2Q07890 1332 aaPredicted RBP16.88■□□□□ 0.29
EXOSC1-208ENST00000476234 RRBP1Q9P2E9 1410 aaKnown RBP16.86■□□□□ 0.29
EXOSC1-208ENST00000476234 NGLY1Q96IV0 654 aa16.84■□□□□ 0.29
EXOSC1-208ENST00000476234 ROBO2Q9HCK4 1378 aa16.84■□□□□ 0.29
EXOSC1-208ENST00000476234 FNBP4Q8N3X1 1017 aaPredicted RBP16.83■□□□□ 0.28
EXOSC1-208ENST00000476234 COL22A1Q8NFW1 1626 aaPredicted RBP16.82■□□□□ 0.28
EXOSC1-208ENST00000476234 ATAD2Q6PL18 1390 aa16.82■□□□□ 0.28
EXOSC1-208ENST00000476234 ADAMTS2O95450 1211 aa16.82■□□□□ 0.28
EXOSC1-208ENST00000476234 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms