RNA–Protein interactions for RNA: ENST00000476117.1

SRPK2-209, Transcript of SRSF protein kinase 2, humanhuman

TSL 2

Gene SRPK2, Length 703 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK2-209ENST00000476117 ZFYVE9O95405 1425 aa13.78□□□□□ -0.2
SRPK2-209ENST00000476117 HSPA1LP34931 641 aa13.77□□□□□ -0.21
SRPK2-209ENST00000476117 PIP4K2BP78356 416 aa13.76□□□□□ -0.21
SRPK2-209ENST00000476117 SPHKAPQ2M3C7 1700 aa13.76□□□□□ -0.21
SRPK2-209ENST00000476117 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
SRPK2-209ENST00000476117 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
SRPK2-209ENST00000476117 SCAF1Q9H7N4 1312 aaKnown RBP13.74□□□□□ -0.21
SRPK2-209ENST00000476117 RIMS2Q9UQ26 1411 aa13.72□□□□□ -0.21
SRPK2-209ENST00000476117 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.21
SRPK2-209ENST00000476117 SOCS7O14512 581 aa13.71□□□□□ -0.21
SRPK2-209ENST00000476117 RRBP1Q9P2E9 1410 aaKnown RBP13.71□□□□□ -0.22
SRPK2-209ENST00000476117 DIP2AQ14689 1571 aa13.71□□□□□ -0.22
SRPK2-209ENST00000476117 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
SRPK2-209ENST00000476117 KCNA6P17658 529 aa13.7□□□□□ -0.22
SRPK2-209ENST00000476117 TMEM94Q12767 1356 aa13.7□□□□□ -0.22
SRPK2-209ENST00000476117 SLC26A8Q96RN1 970 aa13.69□□□□□ -0.22
SRPK2-209ENST00000476117 NUP155O75694 1391 aa13.68□□□□□ -0.22
SRPK2-209ENST00000476117 NRXN3Q9Y4C0 1643 aa13.68□□□□□ -0.22
SRPK2-209ENST00000476117 FAM135BQ49AJ0 1406 aa13.67□□□□□ -0.22
SRPK2-209ENST00000476117 ADAMTS13Q76LX8 1427 aa13.67□□□□□ -0.22
SRPK2-209ENST00000476117 KIF1BO60333 1816 aa13.66□□□□□ -0.22
SRPK2-209ENST00000476117 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
SRPK2-209ENST00000476117 PPARGC1BQ86YN6 1023 aaKnown RBP13.65□□□□□ -0.22
SRPK2-209ENST00000476117 NAIPQ13075 1403 aa13.64□□□□□ -0.23
SRPK2-209ENST00000476117 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
SRPK2-209ENST00000476117 SETBP1Q9Y6X0 1596 aa13.64□□□□□ -0.23
SRPK2-209ENST00000476117 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.64□□□□□ -0.23
SRPK2-209ENST00000476117 TRPM2O94759 1503 aa13.64□□□□□ -0.23
SRPK2-209ENST00000476117 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
SRPK2-209ENST00000476117 ITGAEP38570 1179 aa13.63□□□□□ -0.23
SRPK2-209ENST00000476117 HDGFP51858 240 aaKnown RBP13.63□□□□□ -0.23
SRPK2-209ENST00000476117 PROSER2Q86WR7 435 aaPredicted RBP13.63□□□□□ -0.23
SRPK2-209ENST00000476117 TBX22Q9Y458 520 aa13.63□□□□□ -0.23
SRPK2-209ENST00000476117 NCOA3Q9Y6Q9 1424 aa13.63□□□□□ -0.23
SRPK2-209ENST00000476117 PHLPP1O60346 1717 aa13.62□□□□□ -0.23
SRPK2-209ENST00000476117 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.62□□□□□ -0.23
SRPK2-209ENST00000476117 MSH6P52701 1360 aa13.6□□□□□ -0.23
SRPK2-209ENST00000476117 NEXMIFQ5QGS0 1516 aa13.6□□□□□ -0.23
SRPK2-209ENST00000476117 SETD1AO15047 1707 aaKnown RBP13.6□□□□□ -0.23
SRPK2-209ENST00000476117 PPP1R15AO75807 674 aaPredicted RBP13.6□□□□□ -0.23
SRPK2-209ENST00000476117 RBM33Q96EV2 1170 aaKnown RBP13.6□□□□□ -0.23
SRPK2-209ENST00000476117 COL16A1Q07092 1604 aaPredicted RBP13.6□□□□□ -0.23
SRPK2-209ENST00000476117 HFM1A2PYH4 1435 aa13.59□□□□□ -0.23
SRPK2-209ENST00000476117 PTPRUQ92729 1446 aa13.59□□□□□ -0.23
SRPK2-209ENST00000476117 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
SRPK2-209ENST00000476117 BCANQ96GW7 911 aa13.58□□□□□ -0.24
SRPK2-209ENST00000476117 NUTM2DQ5VT03 806 aaPredicted RBP13.57□□□□□ -0.24
SRPK2-209ENST00000476117 PPLO60437 1756 aa13.57□□□□□ -0.24
SRPK2-209ENST00000476117 AHDC1Q5TGY3 1603 aaPredicted RBP13.56□□□□□ -0.24
SRPK2-209ENST00000476117 NALCNQ8IZF0 1738 aa13.55□□□□□ -0.24
SRPK2-209ENST00000476117 SHPRHQ149N8 1683 aa13.54□□□□□ -0.24
SRPK2-209ENST00000476117 SLAIN2Q9P270 581 aa13.54□□□□□ -0.24
SRPK2-209ENST00000476117 DCCP43146 1447 aa13.54□□□□□ -0.24
SRPK2-209ENST00000476117 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
SRPK2-209ENST00000476117 RGS17Q9UGC6 210 aaPredicted RBP13.53□□□□□ -0.24
SRPK2-209ENST00000476117 NHSL1Q5SYE7 1610 aa13.53□□□□□ -0.24
SRPK2-209ENST00000476117 IFT172Q9UG01 1749 aa13.53□□□□□ -0.24
SRPK2-209ENST00000476117 METP08581 1390 aa13.51□□□□□ -0.25
SRPK2-209ENST00000476117 AMOTL2Q9Y2J4 779 aa13.51□□□□□ -0.25
SRPK2-209ENST00000476117 C19orf44Q9H6X5 657 aa13.5□□□□□ -0.25
SRPK2-209ENST00000476117 PRAG1Q86YV5 1406 aa13.49□□□□□ -0.25
SRPK2-209ENST00000476117 CADPS2Q86UW7 1296 aa13.49□□□□□ -0.25
SRPK2-209ENST00000476117 JCADQ9P266 1359 aa13.48□□□□□ -0.25
SRPK2-209ENST00000476117 ZNF326Q5BKZ1 582 aaKnown RBP13.48□□□□□ -0.25
SRPK2-209ENST00000476117 MST1RQ04912 1400 aa13.47□□□□□ -0.25
SRPK2-209ENST00000476117 LAMC1P11047 1609 aa13.47□□□□□ -0.25
SRPK2-209ENST00000476117 ASXL1Q8IXJ9 1541 aa13.47□□□□□ -0.25
SRPK2-209ENST00000476117 ADGRL3Q9HAR2 1447 aa13.47□□□□□ -0.25
SRPK2-209ENST00000476117 LRP6O75581 1613 aa13.46□□□□□ -0.25
SRPK2-209ENST00000476117 PTCH1Q13635 1447 aa13.46□□□□□ -0.26
SRPK2-209ENST00000476117 ATF3P18847 181 aa13.45□□□□□ -0.26
SRPK2-209ENST00000476117 C14orf37Q86TY3 774 aa13.45□□□□□ -0.26
SRPK2-209ENST00000476117 BRINP3Q76B58 766 aa13.44□□□□□ -0.26
SRPK2-209ENST00000476117 TRIM52Q96A61 297 aa13.44□□□□□ -0.26
SRPK2-209ENST00000476117 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
SRPK2-209ENST00000476117 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
SRPK2-209ENST00000476117 RPGRIP1LQ68CZ1 1315 aa13.42□□□□□ -0.26
SRPK2-209ENST00000476117 SPATA31E1Q6ZUB1 1445 aa13.42□□□□□ -0.26
SRPK2-209ENST00000476117 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
SRPK2-209ENST00000476117 POTEAQ6S8J7 498 aa13.42□□□□□ -0.26
SRPK2-209ENST00000476117 SPATA31A6Q5VVP1 1343 aa13.41□□□□□ -0.26
SRPK2-209ENST00000476117 VGFO15240 615 aaPredicted RBP13.41□□□□□ -0.26
SRPK2-209ENST00000476117 ROBO2Q9HCK4 1378 aa13.4□□□□□ -0.26
SRPK2-209ENST00000476117 CCDC144AA2RUR9 1427 aa13.39□□□□□ -0.27
SRPK2-209ENST00000476117 CDC42BPGQ6DT37 1551 aa13.39□□□□□ -0.27
SRPK2-209ENST00000476117 C1orf167Q5SNV9 1468 aa13.38□□□□□ -0.27
SRPK2-209ENST00000476117 TECPR2O15040 1411 aa13.37□□□□□ -0.27
SRPK2-209ENST00000476117 MPHOSPH9Q99550 1183 aa13.36□□□□□ -0.27
SRPK2-209ENST00000476117 PIK3C2GO75747 1445 aa13.35□□□□□ -0.27
SRPK2-209ENST00000476117 ADGRF5Q8IZF2 1346 aa13.35□□□□□ -0.27
SRPK2-209ENST00000476117 COL22A1Q8NFW1 1626 aaPredicted RBP13.35□□□□□ -0.27
SRPK2-209ENST00000476117 ANKRD30BQ9BXX2 1392 aa13.34□□□□□ -0.27
SRPK2-209ENST00000476117 FMN2Q9NZ56 1722 aa13.34□□□□□ -0.27
SRPK2-209ENST00000476117 PNPLA6Q8IY17 1366 aa13.33□□□□□ -0.27
SRPK2-209ENST00000476117 MARF1Q9Y4F3 1742 aaKnown RBP13.33□□□□□ -0.27
SRPK2-209ENST00000476117 NRXN1Q9ULB1 1477 aa13.33□□□□□ -0.28
SRPK2-209ENST00000476117 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
SRPK2-209ENST00000476117 RGPD8O14715 1765 aaPredicted RBP13.32□□□□□ -0.28
SRPK2-209ENST00000476117 DDX17Q92841 729 aaKnown RBP13.32□□□□□ -0.28
SRPK2-209ENST00000476117 MYOM2P54296 1465 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms