RNA–Protein interactions for RNA: ENST00000475423.1

DKC1-208, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-208ENST00000475423 NWD1Q149M9 1564 aa25.32■■□□□ 1.64
DKC1-208ENST00000475423 FAM135BQ49AJ0 1406 aa25.32■■□□□ 1.64
DKC1-208ENST00000475423 PROSER2Q86WR7 435 aaPredicted RBP25.32■■□□□ 1.64
DKC1-208ENST00000475423 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
DKC1-208ENST00000475423 E9PCH4 1651 aa25.32■■□□□ 1.64
DKC1-208ENST00000475423 PLEKHG1Q9ULL1 1385 aa25.31■■□□□ 1.64
DKC1-208ENST00000475423 IQGAP3Q86VI3 1631 aa25.31■■□□□ 1.64
DKC1-208ENST00000475423 HDGFP51858 240 aaKnown RBP25.31■■□□□ 1.64
DKC1-208ENST00000475423 NKTRP30414 1462 aaKnown RBP25.31■■□□□ 1.64
DKC1-208ENST00000475423 RIMS2Q9UQ26 1411 aa25.3■■□□□ 1.64
DKC1-208ENST00000475423 BCANQ96GW7 911 aa25.29■■□□□ 1.64
DKC1-208ENST00000475423 RBM33Q96EV2 1170 aaKnown RBP25.28■■□□□ 1.64
DKC1-208ENST00000475423 PHF23Q9BUL5 403 aaPredicted RBP25.27■■□□□ 1.64
DKC1-208ENST00000475423 NUP155O75694 1391 aa25.26■■□□□ 1.63
DKC1-208ENST00000475423 CHD2O14647 1828 aaKnown RBP25.26■■□□□ 1.63
DKC1-208ENST00000475423 PPP1R15AO75807 674 aaPredicted RBP25.25■■□□□ 1.63
DKC1-208ENST00000475423 ITGAEP38570 1179 aa25.25■■□□□ 1.63
DKC1-208ENST00000475423 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.25■■□□□ 1.63
DKC1-208ENST00000475423 TBX22Q9Y458 520 aa25.25■■□□□ 1.63
DKC1-208ENST00000475423 CHGAP10645 457 aaKnown RBP25.23■■□□□ 1.63
DKC1-208ENST00000475423 PPARGC1BQ86YN6 1023 aaKnown RBP25.23■■□□□ 1.63
DKC1-208ENST00000475423 ADAMTS13Q76LX8 1427 aa25.2■■□□□ 1.62
DKC1-208ENST00000475423 ROBO1Q9Y6N7 1651 aa25.2■■□□□ 1.62
DKC1-208ENST00000475423 MSH6P52701 1360 aa25.19■■□□□ 1.62
DKC1-208ENST00000475423 NUTM2DQ5VT03 806 aaPredicted RBP25.16■■□□□ 1.62
DKC1-208ENST00000475423 SLAIN2Q9P270 581 aa25.16■■□□□ 1.62
DKC1-208ENST00000475423 NCOA3Q9Y6Q9 1424 aa25.16■■□□□ 1.62
DKC1-208ENST00000475423 DIP2AQ14689 1571 aa25.15■■□□□ 1.62
DKC1-208ENST00000475423 PIK3R4Q99570 1358 aa25.15■■□□□ 1.62
DKC1-208ENST00000475423 RGS17Q9UGC6 210 aaPredicted RBP25.14■■□□□ 1.62
DKC1-208ENST00000475423 RRBP1Q9P2E9 1410 aaKnown RBP25.12■■□□□ 1.61
DKC1-208ENST00000475423 SPHKAPQ2M3C7 1700 aa25.1■■□□□ 1.61
DKC1-208ENST00000475423 TRPM2O94759 1503 aa25.07■■□□□ 1.6
DKC1-208ENST00000475423 C19orf44Q9H6X5 657 aa25.06■■□□□ 1.6
DKC1-208ENST00000475423 AMOTL2Q9Y2J4 779 aa25.05■■□□□ 1.6
DKC1-208ENST00000475423 NAIPQ13075 1403 aa25.04■■□□□ 1.6
DKC1-208ENST00000475423 PTPRUQ92729 1446 aa25.04■■□□□ 1.6
DKC1-208ENST00000475423 PHLPP1O60346 1717 aa25.04■■□□□ 1.6
DKC1-208ENST00000475423 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.03■■□□□ 1.6
DKC1-208ENST00000475423 SETBP1Q9Y6X0 1596 aa25.03■■□□□ 1.6
DKC1-208ENST00000475423 C14orf37Q86TY3 774 aa25.03■■□□□ 1.6
DKC1-208ENST00000475423 CADPS2Q86UW7 1296 aa25.03■■□□□ 1.6
DKC1-208ENST00000475423 NRXN3Q9Y4C0 1643 aa25.03■■□□□ 1.6
DKC1-208ENST00000475423 JCADQ9P266 1359 aa25■■□□□ 1.59
DKC1-208ENST00000475423 ATF3P18847 181 aa24.99■■□□□ 1.59
DKC1-208ENST00000475423 CLTCL1P53675 1640 aa24.99■■□□□ 1.59
DKC1-208ENST00000475423 ZNF326Q5BKZ1 582 aaKnown RBP24.99■■□□□ 1.59
DKC1-208ENST00000475423 COL16A1Q07092 1604 aaPredicted RBP24.98■■□□□ 1.59
DKC1-208ENST00000475423 XRN1Q8IZH2 1706 aaKnown RBP24.98■■□□□ 1.59
DKC1-208ENST00000475423 POTEAQ6S8J7 498 aa24.97■■□□□ 1.59
DKC1-208ENST00000475423 METP08581 1390 aa24.95■■□□□ 1.59
DKC1-208ENST00000475423 NEXMIFQ5QGS0 1516 aa24.95■■□□□ 1.58
DKC1-208ENST00000475423 HFM1A2PYH4 1435 aa24.94■■□□□ 1.58
DKC1-208ENST00000475423 DCCP43146 1447 aa24.94■■□□□ 1.58
DKC1-208ENST00000475423 AHDC1Q5TGY3 1603 aaPredicted RBP24.94■■□□□ 1.58
DKC1-208ENST00000475423 KIF1BO60333 1816 aa24.92■■□□□ 1.58
DKC1-208ENST00000475423 BRINP3Q76B58 766 aa24.9■■□□□ 1.58
DKC1-208ENST00000475423 SPATA31A6Q5VVP1 1343 aa24.89■■□□□ 1.58
DKC1-208ENST00000475423 TRIM52Q96A61 297 aa24.88■■□□□ 1.57
DKC1-208ENST00000475423 MST1RQ04912 1400 aa24.86■■□□□ 1.57
DKC1-208ENST00000475423 LRP6O75581 1613 aa24.85■■□□□ 1.57
DKC1-208ENST00000475423 SHPRHQ149N8 1683 aa24.85■■□□□ 1.57
DKC1-208ENST00000475423 VGFO15240 615 aaPredicted RBP24.84■■□□□ 1.57
DKC1-208ENST00000475423 SLC4A1APQ9BWU0 796 aaKnown RBP24.84■■□□□ 1.57
DKC1-208ENST00000475423 ADGRL3Q9HAR2 1447 aa24.83■■□□□ 1.57
DKC1-208ENST00000475423 ASXL1Q8IXJ9 1541 aa24.82■■□□□ 1.56
DKC1-208ENST00000475423 RPGRIP1LQ68CZ1 1315 aa24.82■■□□□ 1.56
DKC1-208ENST00000475423 SETD1AO15047 1707 aaKnown RBP24.81■■□□□ 1.56
DKC1-208ENST00000475423 NALCNQ8IZF0 1738 aa24.79■■□□□ 1.56
DKC1-208ENST00000475423 NHSL1Q5SYE7 1610 aa24.79■■□□□ 1.56
DKC1-208ENST00000475423 SETD5Q9C0A6 1442 aa24.78■■□□□ 1.56
DKC1-208ENST00000475423 PTCH1Q13635 1447 aa24.77■■□□□ 1.56
DKC1-208ENST00000475423 PRAG1Q86YV5 1406 aa24.77■■□□□ 1.56
DKC1-208ENST00000475423 PPLO60437 1756 aa24.75■■□□□ 1.55
DKC1-208ENST00000475423 MEX3CQ5U5Q3 659 aaKnown RBP24.75■■□□□ 1.55
DKC1-208ENST00000475423 ZNF772Q68DY9 489 aaPredicted RBP24.75■■□□□ 1.55
DKC1-208ENST00000475423 ROBO2Q9HCK4 1378 aa24.74■■□□□ 1.55
DKC1-208ENST00000475423 LRRC59Q96AG4 307 aaKnown RBP24.73■■□□□ 1.55
DKC1-208ENST00000475423 FOXD1Q16676 465 aa24.72■■□□□ 1.55
DKC1-208ENST00000475423 C1orf167Q5SNV9 1468 aa24.7■■□□□ 1.55
DKC1-208ENST00000475423 DDX17Q92841 729 aaKnown RBP24.7■■□□□ 1.54
DKC1-208ENST00000475423 NUTM2BA6NNL0 878 aaPredicted RBP24.69■■□□□ 1.54
DKC1-208ENST00000475423 NUTM2EB1AL46 878 aaPredicted RBP24.69■■□□□ 1.54
DKC1-208ENST00000475423 NUTM2AQ8IVF1 878 aaPredicted RBP24.69■■□□□ 1.54
DKC1-208ENST00000475423 MPHOSPH9Q99550 1183 aa24.67■■□□□ 1.54
DKC1-208ENST00000475423 LAMC1P11047 1609 aa24.67■■□□□ 1.54
DKC1-208ENST00000475423 CCDC144AA2RUR9 1427 aa24.66■■□□□ 1.54
DKC1-208ENST00000475423 SPATA31E1Q6ZUB1 1445 aa24.66■■□□□ 1.54
DKC1-208ENST00000475423 PNPLA6Q8IY17 1366 aa24.66■■□□□ 1.54
DKC1-208ENST00000475423 ADGRF5Q8IZF2 1346 aa24.64■■□□□ 1.54
DKC1-208ENST00000475423 ORAI2Q96SN7 254 aa24.63■■□□□ 1.53
DKC1-208ENST00000475423 SOS2Q07890 1332 aaPredicted RBP24.62■■□□□ 1.53
DKC1-208ENST00000475423 RGL3Q3MIN7 710 aa24.62■■□□□ 1.53
DKC1-208ENST00000475423 AFF2P51816 1311 aa24.61■■□□□ 1.53
DKC1-208ENST00000475423 RXRBP28702 533 aa24.61■■□□□ 1.53
DKC1-208ENST00000475423 ANKRD30BQ9BXX2 1392 aa24.61■■□□□ 1.53
DKC1-208ENST00000475423 IFT172Q9UG01 1749 aa24.6■■□□□ 1.53
DKC1-208ENST00000475423 TECPR2O15040 1411 aa24.58■■□□□ 1.53
DKC1-208ENST00000475423 ACIN1Q9UKV3 1341 aaKnown RBP24.58■■□□□ 1.52
DKC1-208ENST00000475423 CDK12Q9NYV4 1490 aaPredicted RBP24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms