RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 NCKAP5LQ9HCH0 1330 aa14.32□□□□□ -0.12
PCCB-213ENST00000475214 ARHGAP31Q2M1Z3 1444 aa14.32□□□□□ -0.12
PCCB-213ENST00000475214 CEP170BQ9Y4F5 1589 aaPredicted RBP14.31□□□□□ -0.12
PCCB-213ENST00000475214 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
PCCB-213ENST00000475214 ZNF335Q9H4Z2 1342 aaPredicted RBP14.3□□□□□ -0.12
PCCB-213ENST00000475214 ROCK2O75116 1388 aaKnown RBP14.3□□□□□ -0.12
PCCB-213ENST00000475214 TNRQ92752 1358 aa14.3□□□□□ -0.12
PCCB-213ENST00000475214 TRPM1Q7Z4N2 1603 aa14.3□□□□□ -0.12
PCCB-213ENST00000475214 USP47Q96K76 1375 aa14.29□□□□□ -0.12
PCCB-213ENST00000475214 A2ML1A8K2U0 1454 aa14.29□□□□□ -0.12
PCCB-213ENST00000475214 CFAP65Q6ZU64 1925 aaKnown RBP14.29□□□□□ -0.12
PCCB-213ENST00000475214 NOS1P29475 1434 aa14.27□□□□□ -0.12
PCCB-213ENST00000475214 THEMISQ8N1K5 641 aaPredicted RBP14.27□□□□□ -0.13
PCCB-213ENST00000475214 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.13
PCCB-213ENST00000475214 UGGT1Q9NYU2 1555 aa14.26□□□□□ -0.13
PCCB-213ENST00000475214 LAMC1P11047 1609 aa14.26□□□□□ -0.13
PCCB-213ENST00000475214 NLRP1Q9C000 1473 aa14.25□□□□□ -0.13
PCCB-213ENST00000475214 UBAP1LF5GYI3 381 aa14.25□□□□□ -0.13
PCCB-213ENST00000475214 CHGAP10645 457 aaKnown RBP14.25□□□□□ -0.13
PCCB-213ENST00000475214 FBXO31Q5XUX0 539 aaPredicted RBP14.25□□□□□ -0.13
PCCB-213ENST00000475214 POLR1AO95602 1720 aaPredicted RBP14.24□□□□□ -0.13
PCCB-213ENST00000475214 GPRASP1Q5JY77 1395 aa14.24□□□□□ -0.13
PCCB-213ENST00000475214 WASHC2AQ641Q2 1341 aa14.24□□□□□ -0.13
PCCB-213ENST00000475214 ANKLE2Q86XL3 938 aa14.24□□□□□ -0.13
PCCB-213ENST00000475214 ADGRB3O60242 1522 aa14.24□□□□□ -0.13
PCCB-213ENST00000475214 CCDC7Q96M83 1385 aa14.23□□□□□ -0.13
PCCB-213ENST00000475214 SLC52A1Q9NWF4 448 aa14.23□□□□□ -0.13
PCCB-213ENST00000475214 MYOM2P54296 1465 aa14.23□□□□□ -0.13
PCCB-213ENST00000475214 RPGRIP1LQ68CZ1 1315 aa14.22□□□□□ -0.13
PCCB-213ENST00000475214 NBPF1Q3BBV0 1214 aa14.22□□□□□ -0.13
PCCB-213ENST00000475214 PIK3C2BO00750 1634 aa14.22□□□□□ -0.13
PCCB-213ENST00000475214 SYNMO15061 1565 aa14.22□□□□□ -0.13
PCCB-213ENST00000475214 IFT172Q9UG01 1749 aa14.21□□□□□ -0.14
PCCB-213ENST00000475214 C11orf95C9JLR9 678 aaPredicted RBP14.2□□□□□ -0.14
PCCB-213ENST00000475214 ANP32CO43423 234 aa14.2□□□□□ -0.14
PCCB-213ENST00000475214 KIAA1210Q9ULL0 1709 aa14.2□□□□□ -0.14
PCCB-213ENST00000475214 KIF7Q2M1P5 1343 aa14.19□□□□□ -0.14
PCCB-213ENST00000475214 ST20-MTHFSA0A0A6YYL1 179 aa14.19□□□□□ -0.14
PCCB-213ENST00000475214 IDI1Q13907 227 aa14.18□□□□□ -0.14
PCCB-213ENST00000475214 CPS1P31327 1500 aa14.18□□□□□ -0.14
PCCB-213ENST00000475214 ERVK-7P63135 1459 aa14.18□□□□□ -0.14
PCCB-213ENST00000475214 PPLO60437 1756 aa14.17□□□□□ -0.14
PCCB-213ENST00000475214 ADGRF5Q8IZF2 1346 aa14.15□□□□□ -0.14
PCCB-213ENST00000475214 NRXN1Q9ULB1 1477 aa14.15□□□□□ -0.14
PCCB-213ENST00000475214 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
PCCB-213ENST00000475214 SCAF11Q99590 1463 aaKnown RBP14.14□□□□□ -0.15
PCCB-213ENST00000475214 POLR3GLQ9BT43 218 aa14.14□□□□□ -0.15
PCCB-213ENST00000475214 MED14O60244 1454 aa14.13□□□□□ -0.15
PCCB-213ENST00000475214 CFAP70Q5T0N1 1121 aa14.13□□□□□ -0.15
PCCB-213ENST00000475214 STAG3Q9UJ98 1225 aa14.13□□□□□ -0.15
PCCB-213ENST00000475214 NPHP4O75161 1426 aaPredicted RBP14.13□□□□□ -0.15
PCCB-213ENST00000475214 IQGAP1P46940 1657 aa14.13□□□□□ -0.15
PCCB-213ENST00000475214 EIF3AQ14152 1382 aaKnown RBP14.12□□□□□ -0.15
PCCB-213ENST00000475214 TOM1O60784 492 aa14.12□□□□□ -0.15
PCCB-213ENST00000475214 HSPA1LP34931 641 aa14.12□□□□□ -0.15
PCCB-213ENST00000475214 MED1Q15648 1581 aaPredicted RBP14.12□□□□□ -0.15
PCCB-213ENST00000475214 TMEM131LA2VDJ0 1609 aa14.12□□□□□ -0.15
PCCB-213ENST00000475214 NEXMIFQ5QGS0 1516 aa14.11□□□□□ -0.15
PCCB-213ENST00000475214 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
PCCB-213ENST00000475214 PIK3C2GO75747 1445 aa14.11□□□□□ -0.15
PCCB-213ENST00000475214 TMF1P82094 1093 aa14.11□□□□□ -0.15
PCCB-213ENST00000475214 EID1Q9Y6B2 187 aa14.11□□□□□ -0.15
PCCB-213ENST00000475214 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
PCCB-213ENST00000475214 SETBP1Q9Y6X0 1596 aa14.1□□□□□ -0.15
PCCB-213ENST00000475214 ZFYVE9O95405 1425 aa14.1□□□□□ -0.15
PCCB-213ENST00000475214 CCER2I3L3R5 266 aa14.1□□□□□ -0.15
PCCB-213ENST00000475214 PIP4K2BP78356 416 aa14.1□□□□□ -0.15
PCCB-213ENST00000475214 C14orf93Q9H972 538 aaKnown RBP14.1□□□□□ -0.15
PCCB-213ENST00000475214 MYO5BQ9ULV0 1848 aa14.1□□□□□ -0.15
PCCB-213ENST00000475214 CENPBP07199 599 aaPredicted RBP14.09□□□□□ -0.15
PCCB-213ENST00000475214 TESK2Q96S53 571 aa14.09□□□□□ -0.15
PCCB-213ENST00000475214 ALKQ9UM73 1620 aa14.08□□□□□ -0.15
PCCB-213ENST00000475214 TXNDC2Q86VQ3 553 aa14.07□□□□□ -0.16
PCCB-213ENST00000475214 YTHDC1Q96MU7 727 aaKnown RBP14.07□□□□□ -0.16
PCCB-213ENST00000475214 CDCA8Q53HL2 280 aa14.06□□□□□ -0.16
PCCB-213ENST00000475214 UBR1Q8IWV7 1749 aa14.06□□□□□ -0.16
PCCB-213ENST00000475214 NUTM2DQ5VT03 806 aaPredicted RBP14.05□□□□□ -0.16
PCCB-213ENST00000475214 SLIT1O75093 1534 aa14.05□□□□□ -0.16
PCCB-213ENST00000475214 STRCP1A6NGW2 1772 aa14.04□□□□□ -0.16
PCCB-213ENST00000475214 ARHGAP23Q9P227 1491 aa14.04□□□□□ -0.16
PCCB-213ENST00000475214 HDGFP51858 240 aaKnown RBP14.03□□□□□ -0.16
PCCB-213ENST00000475214 KDM5AP29375 1690 aaKnown RBP14.03□□□□□ -0.16
PCCB-213ENST00000475214 ADGRB1O14514 1584 aa14.02□□□□□ -0.16
PCCB-213ENST00000475214 LRRC7Q96NW7 1537 aa14.02□□□□□ -0.16
PCCB-213ENST00000475214 TMEM2Q9UHN6 1383 aa14.02□□□□□ -0.17
PCCB-213ENST00000475214 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.02□□□□□ -0.17
PCCB-213ENST00000475214 RIMS2Q9UQ26 1411 aa14.01□□□□□ -0.17
PCCB-213ENST00000475214 LTKP29376 864 aa14.01□□□□□ -0.17
PCCB-213ENST00000475214 PRKRIP1Q9H875 184 aaPredicted RBP14.01□□□□□ -0.17
PCCB-213ENST00000475214 CENPJQ9HC77 1338 aaPredicted RBP14□□□□□ -0.17
PCCB-213ENST00000475214 TMEM132EQ6IEE7 984 aa14□□□□□ -0.17
PCCB-213ENST00000475214 TRAK1Q9UPV9 953 aa14□□□□□ -0.17
PCCB-213ENST00000475214 SBNO2Q9Y2G9 1366 aa13.99□□□□□ -0.17
PCCB-213ENST00000475214 BCANQ96GW7 911 aa13.96□□□□□ -0.17
PCCB-213ENST00000475214 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.18
PCCB-213ENST00000475214 QRICH2Q9H0J4 1663 aa13.95□□□□□ -0.18
PCCB-213ENST00000475214 KCNA6P17658 529 aa13.94□□□□□ -0.18
PCCB-213ENST00000475214 ARHGEF28Q8N1W1 1705 aaKnown RBP13.94□□□□□ -0.18
PCCB-213ENST00000475214 PANK3Q9H999 370 aa13.94□□□□□ -0.18
PCCB-213ENST00000475214 RALBP1Q15311 655 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms