RNA–Protein interactions for RNA: ENST00000474916.1

CDK11A-214, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 752 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-214ENST00000474916 PIP4K2BP78356 416 aa25.1■■□□□ 1.61
CDK11A-214ENST00000474916 ZFYVE9O95405 1425 aa25.09■■□□□ 1.61
CDK11A-214ENST00000474916 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
CDK11A-214ENST00000474916 SLC26A8Q96RN1 970 aa25.07■■□□□ 1.6
CDK11A-214ENST00000474916 TOM1O60784 492 aa25.05■■□□□ 1.6
CDK11A-214ENST00000474916 NAIPQ13075 1403 aa25.04■■□□□ 1.6
CDK11A-214ENST00000474916 RIMS2Q9UQ26 1411 aa25.03■■□□□ 1.6
CDK11A-214ENST00000474916 SPHKAPQ2M3C7 1700 aa25.03■■□□□ 1.6
CDK11A-214ENST00000474916 CHGAP10645 457 aaKnown RBP25.02■■□□□ 1.6
CDK11A-214ENST00000474916 NUTM2DQ5VT03 806 aaPredicted RBP25■■□□□ 1.59
CDK11A-214ENST00000474916 NWD1Q149M9 1564 aa24.99■■□□□ 1.59
CDK11A-214ENST00000474916 RBM33Q96EV2 1170 aaKnown RBP24.98■■□□□ 1.59
CDK11A-214ENST00000474916 PLEKHG1Q9ULL1 1385 aa24.97■■□□□ 1.59
CDK11A-214ENST00000474916 CHD2O14647 1828 aaKnown RBP24.96■■□□□ 1.59
CDK11A-214ENST00000474916 KCNA6P17658 529 aa24.95■■□□□ 1.58
CDK11A-214ENST00000474916 BCANQ96GW7 911 aa24.95■■□□□ 1.58
CDK11A-214ENST00000474916 CLTCL1P53675 1640 aa24.94■■□□□ 1.58
CDK11A-214ENST00000474916 TMEM94Q12767 1356 aa24.93■■□□□ 1.58
CDK11A-214ENST00000474916 PPP1R15AO75807 674 aaPredicted RBP24.93■■□□□ 1.58
CDK11A-214ENST00000474916 HFM1A2PYH4 1435 aa24.92■■□□□ 1.58
CDK11A-214ENST00000474916 ADAMTS13Q76LX8 1427 aa24.92■■□□□ 1.58
CDK11A-214ENST00000474916 NKTRP30414 1462 aaKnown RBP24.89■■□□□ 1.57
CDK11A-214ENST00000474916 TRPM2O94759 1503 aa24.87■■□□□ 1.57
CDK11A-214ENST00000474916 NRXN3Q9Y4C0 1643 aa24.87■■□□□ 1.57
CDK11A-214ENST00000474916 PROSER2Q86WR7 435 aaPredicted RBP24.87■■□□□ 1.57
CDK11A-214ENST00000474916 PHF23Q9BUL5 403 aaPredicted RBP24.86■■□□□ 1.57
CDK11A-214ENST00000474916 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.85■■□□□ 1.57
CDK11A-214ENST00000474916 HDGFP51858 240 aaKnown RBP24.84■■□□□ 1.57
CDK11A-214ENST00000474916 TRIM52Q96A61 297 aa24.83■■□□□ 1.57
CDK11A-214ENST00000474916 TBX22Q9Y458 520 aa24.83■■□□□ 1.57
CDK11A-214ENST00000474916 KIF1BO60333 1816 aa24.83■■□□□ 1.57
CDK11A-214ENST00000474916 DIP2AQ14689 1571 aa24.83■■□□□ 1.57
CDK11A-214ENST00000474916 NEXMIFQ5QGS0 1516 aa24.81■■□□□ 1.56
CDK11A-214ENST00000474916 PTPRUQ92729 1446 aa24.8■■□□□ 1.56
CDK11A-214ENST00000474916 ROBO1Q9Y6N7 1651 aa24.8■■□□□ 1.56
CDK11A-214ENST00000474916 ZNF326Q5BKZ1 582 aaKnown RBP24.78■■□□□ 1.56
CDK11A-214ENST00000474916 SETBP1Q9Y6X0 1596 aa24.78■■□□□ 1.56
CDK11A-214ENST00000474916 FOXD1Q16676 465 aa24.76■■□□□ 1.55
CDK11A-214ENST00000474916 SLC4A1APQ9BWU0 796 aaKnown RBP24.75■■□□□ 1.55
CDK11A-214ENST00000474916 FAM135BQ49AJ0 1406 aa24.75■■□□□ 1.55
CDK11A-214ENST00000474916 MSH6P52701 1360 aa24.74■■□□□ 1.55
CDK11A-214ENST00000474916 XRN1Q8IZH2 1706 aaKnown RBP24.74■■□□□ 1.55
CDK11A-214ENST00000474916 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.73■■□□□ 1.55
CDK11A-214ENST00000474916 PIK3R4Q99570 1358 aa24.72■■□□□ 1.55
CDK11A-214ENST00000474916 METP08581 1390 aa24.71■■□□□ 1.55
CDK11A-214ENST00000474916 AMOTL2Q9Y2J4 779 aa24.7■■□□□ 1.54
CDK11A-214ENST00000474916 SETD1AO15047 1707 aaKnown RBP24.69■■□□□ 1.54
CDK11A-214ENST00000474916 PPLO60437 1756 aa24.68■■□□□ 1.54
CDK11A-214ENST00000474916 RGS17Q9UGC6 210 aaPredicted RBP24.67■■□□□ 1.54
CDK11A-214ENST00000474916 SLAIN2Q9P270 581 aa24.65■■□□□ 1.54
CDK11A-214ENST00000474916 NCOA3Q9Y6Q9 1424 aa24.65■■□□□ 1.54
CDK11A-214ENST00000474916 PHLPP1O60346 1717 aa24.64■■□□□ 1.54
CDK11A-214ENST00000474916 C14orf37Q86TY3 774 aa24.64■■□□□ 1.54
CDK11A-214ENST00000474916 MPHOSPH9Q99550 1183 aa24.61■■□□□ 1.53
CDK11A-214ENST00000474916 NALCNQ8IZF0 1738 aa24.59■■□□□ 1.53
CDK11A-214ENST00000474916 COL16A1Q07092 1604 aaPredicted RBP24.58■■□□□ 1.53
CDK11A-214ENST00000474916 C19orf44Q9H6X5 657 aa24.58■■□□□ 1.53
CDK11A-214ENST00000474916 SETD5Q9C0A6 1442 aa24.58■■□□□ 1.53
CDK11A-214ENST00000474916 IFT172Q9UG01 1749 aa24.58■■□□□ 1.52
CDK11A-214ENST00000474916 SPATA31E1Q6ZUB1 1445 aa24.55■■□□□ 1.52
CDK11A-214ENST00000474916 CCDC144AA2RUR9 1427 aa24.54■■□□□ 1.52
CDK11A-214ENST00000474916 ATF3P18847 181 aa24.54■■□□□ 1.52
CDK11A-214ENST00000474916 CADPS2Q86UW7 1296 aa24.54■■□□□ 1.52
CDK11A-214ENST00000474916 VGFO15240 615 aaPredicted RBP24.53■■□□□ 1.52
CDK11A-214ENST00000474916 RPGRIP1LQ68CZ1 1315 aa24.53■■□□□ 1.52
CDK11A-214ENST00000474916 RAB3GAP2Q9H2M9 1393 aa24.53■■□□□ 1.52
CDK11A-214ENST00000474916 RGL3Q3MIN7 710 aa24.52■■□□□ 1.52
CDK11A-214ENST00000474916 AHDC1Q5TGY3 1603 aaPredicted RBP24.52■■□□□ 1.52
CDK11A-214ENST00000474916 ADGRF5Q8IZF2 1346 aa24.51■■□□□ 1.51
CDK11A-214ENST00000474916 DCCP43146 1447 aa24.51■■□□□ 1.51
CDK11A-214ENST00000474916 MST1RQ04912 1400 aa24.51■■□□□ 1.51
CDK11A-214ENST00000474916 ROBO2Q9HCK4 1378 aa24.5■■□□□ 1.51
CDK11A-214ENST00000474916 ADGRL3Q9HAR2 1447 aa24.5■■□□□ 1.51
CDK11A-214ENST00000474916 POTEAQ6S8J7 498 aa24.49■■□□□ 1.51
CDK11A-214ENST00000474916 BRINP3Q76B58 766 aa24.49■■□□□ 1.51
CDK11A-214ENST00000474916 ASXL1Q8IXJ9 1541 aa24.47■■□□□ 1.51
CDK11A-214ENST00000474916 PTCH1Q13635 1447 aa24.47■■□□□ 1.51
CDK11A-214ENST00000474916 JCADQ9P266 1359 aa24.45■■□□□ 1.5
CDK11A-214ENST00000474916 NHSL1Q5SYE7 1610 aa24.45■■□□□ 1.5
CDK11A-214ENST00000474916 PRAG1Q86YV5 1406 aa24.44■■□□□ 1.5
CDK11A-214ENST00000474916 SHPRHQ149N8 1683 aa24.43■■□□□ 1.5
CDK11A-214ENST00000474916 LRP6O75581 1613 aa24.43■■□□□ 1.5
CDK11A-214ENST00000474916 DDX17Q92841 729 aaKnown RBP24.41■■□□□ 1.5
CDK11A-214ENST00000474916 PIK3C2GO75747 1445 aa24.39■■□□□ 1.5
CDK11A-214ENST00000474916 ANKRD30BQ9BXX2 1392 aa24.39■■□□□ 1.49
CDK11A-214ENST00000474916 C1orf167Q5SNV9 1468 aa24.37■■□□□ 1.49
CDK11A-214ENST00000474916 KNDC1Q76NI1 1749 aa24.36■■□□□ 1.49
CDK11A-214ENST00000474916 TMEM132EQ6IEE7 984 aa24.36■■□□□ 1.49
CDK11A-214ENST00000474916 STK26Q9P289 416 aa24.35■■□□□ 1.49
CDK11A-214ENST00000474916 PLEKHH1Q9ULM0 1364 aa24.33■■□□□ 1.49
CDK11A-214ENST00000474916 NRXN1Q9ULB1 1477 aa24.32■■□□□ 1.48
CDK11A-214ENST00000474916 WAPLQ7Z5K2 1190 aa24.32■■□□□ 1.48
CDK11A-214ENST00000474916 TECPR2O15040 1411 aa24.32■■□□□ 1.48
CDK11A-214ENST00000474916 ACIN1Q9UKV3 1341 aaKnown RBP24.32■■□□□ 1.48
CDK11A-214ENST00000474916 LRPPRCP42704 1394 aaKnown RBP24.31■■□□□ 1.48
CDK11A-214ENST00000474916 ORAI2Q96SN7 254 aa24.31■■□□□ 1.48
CDK11A-214ENST00000474916 LAMC1P11047 1609 aa24.31■■□□□ 1.48
CDK11A-214ENST00000474916 CDC42BPGQ6DT37 1551 aa24.3■■□□□ 1.48
CDK11A-214ENST00000474916 MYOM2P54296 1465 aa24.3■■□□□ 1.48
CDK11A-214ENST00000474916 SPATA31A6Q5VVP1 1343 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms