RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 POLR1AO95602 1720 aaPredicted RBP11.8□□□□□ -0.52
HPS1-210ENST00000474873 NEURL4Q96JN8 1562 aa11.8□□□□□ -0.52
HPS1-210ENST00000474873 CCDC144AA2RUR9 1427 aa11.8□□□□□ -0.52
HPS1-210ENST00000474873 ZFYVE9O95405 1425 aa11.8□□□□□ -0.52
HPS1-210ENST00000474873 RIMS2Q9UQ26 1411 aa11.8□□□□□ -0.52
HPS1-210ENST00000474873 CLTCL1P53675 1640 aa11.8□□□□□ -0.52
HPS1-210ENST00000474873 ZNF326Q5BKZ1 582 aaKnown RBP11.79□□□□□ -0.52
HPS1-210ENST00000474873 ANKRD30BQ9BXX2 1392 aa11.79□□□□□ -0.52
HPS1-210ENST00000474873 PPP1R15AO75807 674 aaPredicted RBP11.78□□□□□ -0.52
HPS1-210ENST00000474873 MYO5BQ9ULV0 1848 aa11.78□□□□□ -0.52
HPS1-210ENST00000474873 MED1Q15648 1581 aaPredicted RBP11.78□□□□□ -0.52
HPS1-210ENST00000474873 RPGRIP1LQ68CZ1 1315 aa11.78□□□□□ -0.52
HPS1-210ENST00000474873 IQGAP1P46940 1657 aa11.77□□□□□ -0.53
HPS1-210ENST00000474873 PLEKHG1Q9ULL1 1385 aa11.77□□□□□ -0.53
HPS1-210ENST00000474873 KIF1BO60333 1816 aa11.76□□□□□ -0.53
HPS1-210ENST00000474873 BCANQ96GW7 911 aa11.76□□□□□ -0.53
HPS1-210ENST00000474873 VGFO15240 615 aaPredicted RBP11.75□□□□□ -0.53
HPS1-210ENST00000474873 NUTM2DQ5VT03 806 aaPredicted RBP11.75□□□□□ -0.53
HPS1-210ENST00000474873 ZNF335Q9H4Z2 1342 aaPredicted RBP11.75□□□□□ -0.53
HPS1-210ENST00000474873 SPATA31E1Q6ZUB1 1445 aa11.75□□□□□ -0.53
HPS1-210ENST00000474873 RGL3Q3MIN7 710 aa11.74□□□□□ -0.53
HPS1-210ENST00000474873 SLC26A8Q96RN1 970 aa11.74□□□□□ -0.53
HPS1-210ENST00000474873 TBX22Q9Y458 520 aa11.74□□□□□ -0.53
HPS1-210ENST00000474873 PCGF6Q9BYE7 350 aa11.73□□□□□ -0.53
HPS1-210ENST00000474873 LTBP4Q8N2S1 1624 aa11.72□□□□□ -0.53
HPS1-210ENST00000474873 NEXMIFQ5QGS0 1516 aa11.72□□□□□ -0.53
HPS1-210ENST00000474873 KCNA6P17658 529 aa11.7□□□□□ -0.54
HPS1-210ENST00000474873 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
HPS1-210ENST00000474873 ADAMTS13Q76LX8 1427 aa11.69□□□□□ -0.54
HPS1-210ENST00000474873 DHX57Q6P158 1386 aaKnown RBP11.69□□□□□ -0.54
HPS1-210ENST00000474873 CPS1P31327 1500 aa11.69□□□□□ -0.54
HPS1-210ENST00000474873 IQSEC2Q5JU85 1478 aa11.69□□□□□ -0.54
HPS1-210ENST00000474873 PIK3R4Q99570 1358 aa11.68□□□□□ -0.54
HPS1-210ENST00000474873 SETBP1Q9Y6X0 1596 aa11.68□□□□□ -0.54
HPS1-210ENST00000474873 STAC3Q96MF2 364 aa11.68□□□□□ -0.54
HPS1-210ENST00000474873 DIP2AQ14689 1571 aa11.67□□□□□ -0.54
HPS1-210ENST00000474873 PPLO60437 1756 aa11.67□□□□□ -0.54
HPS1-210ENST00000474873 ADGRF5Q8IZF2 1346 aa11.67□□□□□ -0.54
HPS1-210ENST00000474873 NRXN3Q9Y4C0 1643 aa11.65□□□□□ -0.54
HPS1-210ENST00000474873 DCAF11Q8TEB1 546 aa11.65□□□□□ -0.54
HPS1-210ENST00000474873 SIN3AQ96ST3 1273 aa11.64□□□□□ -0.55
HPS1-210ENST00000474873 AMOTL2Q9Y2J4 779 aa11.64□□□□□ -0.55
HPS1-210ENST00000474873 LRRC7Q96NW7 1537 aa11.64□□□□□ -0.55
HPS1-210ENST00000474873 METP08581 1390 aa11.64□□□□□ -0.55
HPS1-210ENST00000474873 STRCP1A6NGW2 1772 aa11.64□□□□□ -0.55
HPS1-210ENST00000474873 MYOM2P54296 1465 aa11.63□□□□□ -0.55
HPS1-210ENST00000474873 IFT172Q9UG01 1749 aa11.63□□□□□ -0.55
HPS1-210ENST00000474873 PROSER2Q86WR7 435 aaPredicted RBP11.63□□□□□ -0.55
HPS1-210ENST00000474873 NKTRP30414 1462 aaKnown RBP11.63□□□□□ -0.55
HPS1-210ENST00000474873 NRXN1Q9ULB1 1477 aa11.63□□□□□ -0.55
HPS1-210ENST00000474873 CHD2O14647 1828 aaKnown RBP11.63□□□□□ -0.55
HPS1-210ENST00000474873 NWD1Q149M9 1564 aa11.62□□□□□ -0.55
HPS1-210ENST00000474873 PIK3C2GO75747 1445 aa11.62□□□□□ -0.55
HPS1-210ENST00000474873 ALKQ9UM73 1620 aa11.62□□□□□ -0.55
HPS1-210ENST00000474873 NEUROD1Q13562 356 aa11.62□□□□□ -0.55
HPS1-210ENST00000474873 C14orf93Q9H972 538 aaKnown RBP11.62□□□□□ -0.55
HPS1-210ENST00000474873 KDM2AQ9Y2K7 1162 aa11.62□□□□□ -0.55
HPS1-210ENST00000474873 PTPRUQ92729 1446 aa11.61□□□□□ -0.55
HPS1-210ENST00000474873 PHF23Q9BUL5 403 aaPredicted RBP11.61□□□□□ -0.55
HPS1-210ENST00000474873 TMEM94Q12767 1356 aa11.61□□□□□ -0.55
HPS1-210ENST00000474873 NCOA3Q9Y6Q9 1424 aa11.6□□□□□ -0.55
HPS1-210ENST00000474873 CFAP70Q5T0N1 1121 aa11.59□□□□□ -0.55
HPS1-210ENST00000474873 L3MBTL2Q969R5 705 aa11.59□□□□□ -0.55
HPS1-210ENST00000474873 SETD1AO15047 1707 aaKnown RBP11.58□□□□□ -0.56
HPS1-210ENST00000474873 UBAP1LF5GYI3 381 aa11.58□□□□□ -0.56
HPS1-210ENST00000474873 TOM1O60784 492 aa11.58□□□□□ -0.56
HPS1-210ENST00000474873 RBM33Q96EV2 1170 aaKnown RBP11.58□□□□□ -0.56
HPS1-210ENST00000474873 CLSPNQ9HAW4 1339 aa11.58□□□□□ -0.56
HPS1-210ENST00000474873 TMEM132EQ6IEE7 984 aa11.57□□□□□ -0.56
HPS1-210ENST00000474873 PRAG1Q86YV5 1406 aa11.57□□□□□ -0.56
HPS1-210ENST00000474873 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
HPS1-210ENST00000474873 LRPPRCP42704 1394 aaKnown RBP11.56□□□□□ -0.56
HPS1-210ENST00000474873 ABCC11Q96J66 1382 aa11.56□□□□□ -0.56
HPS1-210ENST00000474873 C14orf37Q86TY3 774 aa11.56□□□□□ -0.56
HPS1-210ENST00000474873 C19orf44Q9H6X5 657 aa11.56□□□□□ -0.56
HPS1-210ENST00000474873 MSH6P52701 1360 aa11.55□□□□□ -0.56
HPS1-210ENST00000474873 PTCH1Q13635 1447 aa11.55□□□□□ -0.56
HPS1-210ENST00000474873 SIRT1Q96EB6 747 aa11.55□□□□□ -0.56
HPS1-210ENST00000474873 STK26Q9P289 416 aa11.55□□□□□ -0.56
HPS1-210ENST00000474873 LAMC1P11047 1609 aa11.55□□□□□ -0.56
HPS1-210ENST00000474873 XIRP1Q702N8 1843 aaKnown RBP11.55□□□□□ -0.56
HPS1-210ENST00000474873 ROBO2Q9HCK4 1378 aa11.54□□□□□ -0.56
HPS1-210ENST00000474873 TECPR2O15040 1411 aa11.54□□□□□ -0.56
HPS1-210ENST00000474873 YTHDC2Q9H6S0 1430 aaKnown RBP11.54□□□□□ -0.56
HPS1-210ENST00000474873 TONSLQ96HA7 1378 aa11.54□□□□□ -0.56
HPS1-210ENST00000474873 HSPA1LP34931 641 aa11.53□□□□□ -0.56
HPS1-210ENST00000474873 CCER1Q8TC90 406 aaPredicted RBP11.53□□□□□ -0.56
HPS1-210ENST00000474873 ASXL1Q8IXJ9 1541 aa11.53□□□□□ -0.56
HPS1-210ENST00000474873 ATF3P18847 181 aa11.52□□□□□ -0.57
HPS1-210ENST00000474873 CADPS2Q86UW7 1296 aa11.52□□□□□ -0.57
HPS1-210ENST00000474873 TIMELESSQ9UNS1 1208 aa11.52□□□□□ -0.57
HPS1-210ENST00000474873 ADGRB1O14514 1584 aa11.52□□□□□ -0.57
HPS1-210ENST00000474873 FAM135BQ49AJ0 1406 aa11.52□□□□□ -0.57
HPS1-210ENST00000474873 PIP4K2BP78356 416 aa11.51□□□□□ -0.57
HPS1-210ENST00000474873 WAPLQ7Z5K2 1190 aa11.51□□□□□ -0.57
HPS1-210ENST00000474873 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
HPS1-210ENST00000474873 ADGRL3Q9HAR2 1447 aa11.51□□□□□ -0.57
HPS1-210ENST00000474873 DCCP43146 1447 aa11.5□□□□□ -0.57
HPS1-210ENST00000474873 KIAA1210Q9ULL0 1709 aa11.49□□□□□ -0.57
HPS1-210ENST00000474873 NBPF1Q3BBV0 1214 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms