RNA–Protein interactions for RNA: ENST00000474153.1

UBE3C-206, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-206ENST00000474153 EID1Q9Y6B2 187 aa9.17□□□□□ -0.94
UBE3C-206ENST00000474153 TXNDC2Q86VQ3 553 aa9.16□□□□□ -0.94
UBE3C-206ENST00000474153 CHD2O14647 1828 aaKnown RBP9.16□□□□□ -0.94
UBE3C-206ENST00000474153 TRPM2O94759 1503 aa9.15□□□□□ -0.94
UBE3C-206ENST00000474153 PPLO60437 1756 aa9.15□□□□□ -0.94
UBE3C-206ENST00000474153 CLTCL1P53675 1640 aa9.15□□□□□ -0.94
UBE3C-206ENST00000474153 SETD1AO15047 1707 aaKnown RBP9.14□□□□□ -0.95
UBE3C-206ENST00000474153 LTKP29376 864 aa9.14□□□□□ -0.95
UBE3C-206ENST00000474153 PPARGC1BQ86YN6 1023 aaKnown RBP9.14□□□□□ -0.95
UBE3C-206ENST00000474153 NRXN3Q9Y4C0 1643 aa9.13□□□□□ -0.95
UBE3C-206ENST00000474153 NWD1Q149M9 1564 aa9.12□□□□□ -0.95
UBE3C-206ENST00000474153 TMEM2Q9UHN6 1383 aa9.12□□□□□ -0.95
UBE3C-206ENST00000474153 KCNA6P17658 529 aa9.11□□□□□ -0.95
UBE3C-206ENST00000474153 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
UBE3C-206ENST00000474153 STAG3Q9UJ98 1225 aa9.11□□□□□ -0.95
UBE3C-206ENST00000474153 ZFYVE9O95405 1425 aa9.11□□□□□ -0.95
UBE3C-206ENST00000474153 TMEM94Q12767 1356 aa9.11□□□□□ -0.95
UBE3C-206ENST00000474153 DIP2AQ14689 1571 aa9.1□□□□□ -0.95
UBE3C-206ENST00000474153 ROBO1Q9Y6N7 1651 aa9.1□□□□□ -0.95
UBE3C-206ENST00000474153 PROSER2Q86WR7 435 aaPredicted RBP9.09□□□□□ -0.95
UBE3C-206ENST00000474153 NEXMIFQ5QGS0 1516 aa9.09□□□□□ -0.95
UBE3C-206ENST00000474153 SLC52A1Q9NWF4 448 aa9.08□□□□□ -0.96
UBE3C-206ENST00000474153 NUP155O75694 1391 aa9.08□□□□□ -0.96
UBE3C-206ENST00000474153 NKTRP30414 1462 aaKnown RBP9.08□□□□□ -0.96
UBE3C-206ENST00000474153 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.07□□□□□ -0.96
UBE3C-206ENST00000474153 XRN1Q8IZH2 1706 aaKnown RBP9.07□□□□□ -0.96
UBE3C-206ENST00000474153 MSH6P52701 1360 aa9.07□□□□□ -0.96
UBE3C-206ENST00000474153 JCADQ9P266 1359 aa9.07□□□□□ -0.96
UBE3C-206ENST00000474153 SETBP1Q9Y6X0 1596 aa9.07□□□□□ -0.96
UBE3C-206ENST00000474153 IDI1Q13907 227 aa9.06□□□□□ -0.96
UBE3C-206ENST00000474153 SLC26A8Q96RN1 970 aa9.06□□□□□ -0.96
UBE3C-206ENST00000474153 SLAIN2Q9P270 581 aa9.06□□□□□ -0.96
UBE3C-206ENST00000474153 ITGAEP38570 1179 aa9.05□□□□□ -0.96
UBE3C-206ENST00000474153 HDGFP51858 240 aaKnown RBP9.05□□□□□ -0.96
UBE3C-206ENST00000474153 PHLPP1O60346 1717 aa9.05□□□□□ -0.96
UBE3C-206ENST00000474153 SETD5Q9C0A6 1442 aa9.05□□□□□ -0.96
UBE3C-206ENST00000474153 ACIN1Q9UKV3 1341 aaKnown RBP9.05□□□□□ -0.96
UBE3C-206ENST00000474153 ZNF772Q68DY9 489 aaPredicted RBP9.04□□□□□ -0.96
UBE3C-206ENST00000474153 KNDC1Q76NI1 1749 aa9.04□□□□□ -0.96
UBE3C-206ENST00000474153 NCOA3Q9Y6Q9 1424 aa9.04□□□□□ -0.96
UBE3C-206ENST00000474153 SPATA31A6Q5VVP1 1343 aa9.04□□□□□ -0.96
UBE3C-206ENST00000474153 BCANQ96GW7 911 aa9.03□□□□□ -0.96
UBE3C-206ENST00000474153 RBM33Q96EV2 1170 aaKnown RBP9.02□□□□□ -0.97
UBE3C-206ENST00000474153 LAMC1P11047 1609 aa9.02□□□□□ -0.97
UBE3C-206ENST00000474153 PLEKHG1Q9ULL1 1385 aa9.01□□□□□ -0.97
UBE3C-206ENST00000474153 UPF1Q92900 1129 aaKnown RBP eCLIP9.01□□□□□ -0.97
UBE3C-206ENST00000474153 RIMS2Q9UQ26 1411 aa9.01□□□□□ -0.97
UBE3C-206ENST00000474153 TBX22Q9Y458 520 aa9.01□□□□□ -0.97
UBE3C-206ENST00000474153 COL16A1Q07092 1604 aaPredicted RBP9.01□□□□□ -0.97
UBE3C-206ENST00000474153 RAB3GAP2Q9H2M9 1393 aa9□□□□□ -0.97
UBE3C-206ENST00000474153 ADAMTS13Q76LX8 1427 aa9□□□□□ -0.97
UBE3C-206ENST00000474153 PRAG1Q86YV5 1406 aa9□□□□□ -0.97
UBE3C-206ENST00000474153 HRCP23327 699 aa9□□□□□ -0.97
UBE3C-206ENST00000474153 MEX3CQ5U5Q3 659 aaKnown RBP9□□□□□ -0.97
UBE3C-206ENST00000474153 CADPS2Q86UW7 1296 aa9□□□□□ -0.97
UBE3C-206ENST00000474153 NALCNQ8IZF0 1738 aa9□□□□□ -0.97
UBE3C-206ENST00000474153 SPATA31E1Q6ZUB1 1445 aa8.99□□□□□ -0.97
UBE3C-206ENST00000474153 PPP1R15AO75807 674 aaPredicted RBP8.99□□□□□ -0.97
UBE3C-206ENST00000474153 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.99□□□□□ -0.97
UBE3C-206ENST00000474153 C19orf44Q9H6X5 657 aa8.99□□□□□ -0.97
UBE3C-206ENST00000474153 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.99□□□□□ -0.97
UBE3C-206ENST00000474153 SHPRHQ149N8 1683 aa8.98□□□□□ -0.97
UBE3C-206ENST00000474153 ATF3P18847 181 aa8.98□□□□□ -0.97
UBE3C-206ENST00000474153 RXRBP28702 533 aa8.98□□□□□ -0.97
UBE3C-206ENST00000474153 C14orf37Q86TY3 774 aa8.98□□□□□ -0.97
UBE3C-206ENST00000474153 AHDC1Q5TGY3 1603 aaPredicted RBP8.98□□□□□ -0.97
UBE3C-206ENST00000474153 PIK3R4Q99570 1358 aa8.98□□□□□ -0.97
UBE3C-206ENST00000474153 KIAA1210Q9ULL0 1709 aa8.97□□□□□ -0.97
UBE3C-206ENST00000474153 CDK12Q9NYV4 1490 aaPredicted RBP8.97□□□□□ -0.97
UBE3C-206ENST00000474153 LRP6O75581 1613 aa8.97□□□□□ -0.97
UBE3C-206ENST00000474153 NRXN1Q9ULB1 1477 aa8.96□□□□□ -0.97
UBE3C-206ENST00000474153 TRIM52Q96A61 297 aa8.96□□□□□ -0.98
UBE3C-206ENST00000474153 MYOM2P54296 1465 aa8.96□□□□□ -0.98
UBE3C-206ENST00000474153 SLC4A1APQ9BWU0 796 aaKnown RBP8.95□□□□□ -0.98
UBE3C-206ENST00000474153 CCDC144AA2RUR9 1427 aa8.95□□□□□ -0.98
UBE3C-206ENST00000474153 ASXL1Q8IXJ9 1541 aa8.95□□□□□ -0.98
UBE3C-206ENST00000474153 MPHOSPH9Q99550 1183 aa8.94□□□□□ -0.98
UBE3C-206ENST00000474153 DCCP43146 1447 aa8.94□□□□□ -0.98
UBE3C-206ENST00000474153 BRINP3Q76B58 766 aa8.93□□□□□ -0.98
UBE3C-206ENST00000474153 ANKRD30BQ9BXX2 1392 aa8.93□□□□□ -0.98
UBE3C-206ENST00000474153 PTPRUQ92729 1446 aa8.93□□□□□ -0.98
UBE3C-206ENST00000474153 ARHGEF28Q8N1W1 1705 aaKnown RBP8.92□□□□□ -0.98
UBE3C-206ENST00000474153 NHSL1Q5SYE7 1610 aa8.92□□□□□ -0.98
UBE3C-206ENST00000474153 PIK3C2GO75747 1445 aa8.92□□□□□ -0.98
UBE3C-206ENST00000474153 RPGRIP1LQ68CZ1 1315 aa8.92□□□□□ -0.98
UBE3C-206ENST00000474153 LRRC59Q96AG4 307 aaKnown RBP8.92□□□□□ -0.98
UBE3C-206ENST00000474153 AMOTL2Q9Y2J4 779 aa8.92□□□□□ -0.98
UBE3C-206ENST00000474153 RGPD8O14715 1765 aaPredicted RBP8.91□□□□□ -0.98
UBE3C-206ENST00000474153 AFF2P51816 1311 aa8.91□□□□□ -0.98
UBE3C-206ENST00000474153 NUTM2BA6NNL0 878 aaPredicted RBP8.91□□□□□ -0.98
UBE3C-206ENST00000474153 NUTM2EB1AL46 878 aaPredicted RBP8.91□□□□□ -0.98
UBE3C-206ENST00000474153 CHGAP10645 457 aaKnown RBP8.91□□□□□ -0.98
UBE3C-206ENST00000474153 RBM6P78332 1123 aaKnown RBP8.91□□□□□ -0.98
UBE3C-206ENST00000474153 FOXD1Q16676 465 aa8.91□□□□□ -0.98
UBE3C-206ENST00000474153 NUTM2AQ8IVF1 878 aaPredicted RBP8.91□□□□□ -0.98
UBE3C-206ENST00000474153 PTCH1Q13635 1447 aa8.9□□□□□ -0.98
UBE3C-206ENST00000474153 QTRT2Q9H974 415 aaKnown RBP8.9□□□□□ -0.98
UBE3C-206ENST00000474153 TECPR2O15040 1411 aa8.89□□□□□ -0.99
UBE3C-206ENST00000474153 FMN2Q9NZ56 1722 aa8.89□□□□□ -0.99
UBE3C-206ENST00000474153 NGLY1Q96IV0 654 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms