RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 MSH6P52701 1360 aa27.25■■□□□ 1.95
CUL4A-208ENST00000474116 APLP2Q06481 763 aa27.24■■□□□ 1.95
CUL4A-208ENST00000474116 ZFYVE9O95405 1425 aa27.24■■□□□ 1.95
CUL4A-208ENST00000474116 BCANQ96GW7 911 aa27.23■■□□□ 1.95
CUL4A-208ENST00000474116 ADGRL2O95490 1459 aa27.23■■□□□ 1.95
CUL4A-208ENST00000474116 CHD2O14647 1828 aaKnown RBP27.23■■□□□ 1.95
CUL4A-208ENST00000474116 PHLPP1O60346 1717 aa27.22■■□□□ 1.95
CUL4A-208ENST00000474116 RPRD2Q5VT52 1461 aaKnown RBP27.22■■□□□ 1.95
CUL4A-208ENST00000474116 PLEKHG1Q9ULL1 1385 aa27.22■■□□□ 1.95
CUL4A-208ENST00000474116 JCADQ9P266 1359 aa27.2■■□□□ 1.94
CUL4A-208ENST00000474116 MYO5BQ9ULV0 1848 aa27.19■■□□□ 1.94
CUL4A-208ENST00000474116 RIMS2Q9UQ26 1411 aa27.17■■□□□ 1.94
CUL4A-208ENST00000474116 TMEM131LA2VDJ0 1609 aa27.16■■□□□ 1.94
CUL4A-208ENST00000474116 TBX22Q9Y458 520 aa27.15■■□□□ 1.94
CUL4A-208ENST00000474116 COL16A1Q07092 1604 aaPredicted RBP27.15■■□□□ 1.94
CUL4A-208ENST00000474116 ANKRD50Q9ULJ7 1429 aa27.15■■□□□ 1.94
CUL4A-208ENST00000474116 GCC2Q8IWJ2 1684 aa27.14■■□□□ 1.94
CUL4A-208ENST00000474116 HDGFP51858 240 aaKnown RBP27.14■■□□□ 1.94
CUL4A-208ENST00000474116 NCOA3Q9Y6Q9 1424 aa27.14■■□□□ 1.93
CUL4A-208ENST00000474116 SETD1AO15047 1707 aaKnown RBP27.13■■□□□ 1.93
CUL4A-208ENST00000474116 PPP1R15AO75807 674 aaPredicted RBP27.12■■□□□ 1.93
CUL4A-208ENST00000474116 LRP6O75581 1613 aa27.08■■□□□ 1.93
CUL4A-208ENST00000474116 ADAMTS13Q76LX8 1427 aa27.07■■□□□ 1.92
CUL4A-208ENST00000474116 FAM50AQ14320 339 aaKnown RBP27.07■■□□□ 1.92
CUL4A-208ENST00000474116 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.07■■□□□ 1.92
CUL4A-208ENST00000474116 SPATA31A6Q5VVP1 1343 aa27.06■■□□□ 1.92
CUL4A-208ENST00000474116 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.04■■□□□ 1.92
CUL4A-208ENST00000474116 C19orf44Q9H6X5 657 aa27.04■■□□□ 1.92
CUL4A-208ENST00000474116 UNC13BO14795 1591 aa27.03■■□□□ 1.92
CUL4A-208ENST00000474116 AHDC1Q5TGY3 1603 aaPredicted RBP27.03■■□□□ 1.92
CUL4A-208ENST00000474116 CADPS2Q86UW7 1296 aa27.03■■□□□ 1.92
CUL4A-208ENST00000474116 DIP2AQ14689 1571 aa27.02■■□□□ 1.92
CUL4A-208ENST00000474116 PIK3R4Q99570 1358 aa27.02■■□□□ 1.92
CUL4A-208ENST00000474116 CHGAP10645 457 aaKnown RBP27.02■■□□□ 1.92
CUL4A-208ENST00000474116 NUTM2DQ5VT03 806 aaPredicted RBP27.02■■□□□ 1.92
CUL4A-208ENST00000474116 C14orf37Q86TY3 774 aa27.02■■□□□ 1.92
CUL4A-208ENST00000474116 E9PCH4 1651 aa27.01■■□□□ 1.91
CUL4A-208ENST00000474116 SHPRHQ149N8 1683 aa26.99■■□□□ 1.91
CUL4A-208ENST00000474116 ATF3P18847 181 aa26.99■■□□□ 1.91
CUL4A-208ENST00000474116 ZNF772Q68DY9 489 aaPredicted RBP26.99■■□□□ 1.91
CUL4A-208ENST00000474116 MEX3CQ5U5Q3 659 aaKnown RBP26.97■■□□□ 1.91
CUL4A-208ENST00000474116 UPF1Q92900 1129 aaKnown RBP eCLIP26.96■■□□□ 1.91
CUL4A-208ENST00000474116 PTPRUQ92729 1446 aa26.96■■□□□ 1.91
CUL4A-208ENST00000474116 AMOTL2Q9Y2J4 779 aa26.95■■□□□ 1.9
CUL4A-208ENST00000474116 BRINP3Q76B58 766 aa26.94■■□□□ 1.9
CUL4A-208ENST00000474116 TRPM2O94759 1503 aa26.94■■□□□ 1.9
CUL4A-208ENST00000474116 TRIM52Q96A61 297 aa26.93■■□□□ 1.9
CUL4A-208ENST00000474116 IQGAP3Q86VI3 1631 aa26.93■■□□□ 1.9
CUL4A-208ENST00000474116 ROCK1Q13464 1354 aa26.9■■□□□ 1.9
CUL4A-208ENST00000474116 DCCP43146 1447 aa26.88■■□□□ 1.89
CUL4A-208ENST00000474116 RXRBP28702 533 aa26.87■■□□□ 1.89
CUL4A-208ENST00000474116 NRXN3Q9Y4C0 1643 aa26.86■■□□□ 1.89
CUL4A-208ENST00000474116 XRN1Q8IZH2 1706 aaKnown RBP26.85■■□□□ 1.89
CUL4A-208ENST00000474116 NUTM2BA6NNL0 878 aaPredicted RBP26.85■■□□□ 1.89
CUL4A-208ENST00000474116 NUTM2EB1AL46 878 aaPredicted RBP26.85■■□□□ 1.89
CUL4A-208ENST00000474116 NUTM2AQ8IVF1 878 aaPredicted RBP26.85■■□□□ 1.89
CUL4A-208ENST00000474116 ASXL1Q8IXJ9 1541 aa26.85■■□□□ 1.89
CUL4A-208ENST00000474116 NUP155O75694 1391 aa26.84■■□□□ 1.89
CUL4A-208ENST00000474116 SETD5Q9C0A6 1442 aa26.84■■□□□ 1.89
CUL4A-208ENST00000474116 CDK12Q9NYV4 1490 aaPredicted RBP26.84■■□□□ 1.89
CUL4A-208ENST00000474116 SETBP1Q9Y6X0 1596 aa26.83■■□□□ 1.89
CUL4A-208ENST00000474116 MST1RQ04912 1400 aa26.82■■□□□ 1.88
CUL4A-208ENST00000474116 NHSL1Q5SYE7 1610 aa26.81■■□□□ 1.88
CUL4A-208ENST00000474116 AFF2P51816 1311 aa26.8■■□□□ 1.88
CUL4A-208ENST00000474116 METP08581 1390 aa26.78■■□□□ 1.88
CUL4A-208ENST00000474116 LRRC59Q96AG4 307 aaKnown RBP26.77■■□□□ 1.88
CUL4A-208ENST00000474116 SPHKAPQ2M3C7 1700 aa26.73■■□□□ 1.87
CUL4A-208ENST00000474116 DDX17Q92841 729 aaKnown RBP26.73■■□□□ 1.87
CUL4A-208ENST00000474116 ADGRL3Q9HAR2 1447 aa26.72■■□□□ 1.87
CUL4A-208ENST00000474116 PNPLA6Q8IY17 1366 aa26.71■■□□□ 1.87
CUL4A-208ENST00000474116 ZNF326Q5BKZ1 582 aaKnown RBP26.71■■□□□ 1.87
CUL4A-208ENST00000474116 C8orf37Q96NL8 207 aa26.7■■□□□ 1.86
CUL4A-208ENST00000474116 QTRT2Q9H974 415 aaKnown RBP26.7■■□□□ 1.86
CUL4A-208ENST00000474116 NALCNQ8IZF0 1738 aa26.68■■□□□ 1.86
CUL4A-208ENST00000474116 RGS12O14924 1447 aa26.68■■□□□ 1.86
CUL4A-208ENST00000474116 ITGAEP38570 1179 aa26.68■■□□□ 1.86
CUL4A-208ENST00000474116 RBM6P78332 1123 aaKnown RBP26.68■■□□□ 1.86
CUL4A-208ENST00000474116 NEXMIFQ5QGS0 1516 aa26.66■■□□□ 1.86
CUL4A-208ENST00000474116 C1orf167Q5SNV9 1468 aa26.63■■□□□ 1.85
CUL4A-208ENST00000474116 LAMC1P11047 1609 aa26.63■■□□□ 1.85
CUL4A-208ENST00000474116 CLTCL1P53675 1640 aa26.63■■□□□ 1.85
CUL4A-208ENST00000474116 ADAMTS2O95450 1211 aa26.59■■□□□ 1.85
CUL4A-208ENST00000474116 NGLY1Q96IV0 654 aa26.59■■□□□ 1.85
CUL4A-208ENST00000474116 SOS2Q07890 1332 aaPredicted RBP26.58■■□□□ 1.85
CUL4A-208ENST00000474116 PTCH1Q13635 1447 aa26.56■■□□□ 1.84
CUL4A-208ENST00000474116 ORAI2Q96SN7 254 aa26.56■■□□□ 1.84
CUL4A-208ENST00000474116 ROBO2Q9HCK4 1378 aa26.55■■□□□ 1.84
CUL4A-208ENST00000474116 KIF1BO60333 1816 aa26.54■■□□□ 1.84
CUL4A-208ENST00000474116 PRAG1Q86YV5 1406 aa26.52■■□□□ 1.84
CUL4A-208ENST00000474116 VGFO15240 615 aaPredicted RBP26.51■■□□□ 1.83
CUL4A-208ENST00000474116 FNBP4Q8N3X1 1017 aaPredicted RBP26.51■■□□□ 1.83
CUL4A-208ENST00000474116 USP21Q9UK80 565 aa26.51■■□□□ 1.83
CUL4A-208ENST00000474116 ATAD2Q6PL18 1390 aa26.49■■□□□ 1.83
CUL4A-208ENST00000474116 TRPC5Q9UL62 973 aaPredicted RBP26.49■■□□□ 1.83
CUL4A-208ENST00000474116 SRCAPQ6ZRS2 3230 aa26.48■■□□□ 1.83
CUL4A-208ENST00000474116 PPARGC1BQ86YN6 1023 aaKnown RBP26.48■■□□□ 1.83
CUL4A-208ENST00000474116 COL22A1Q8NFW1 1626 aaPredicted RBP26.47■■□□□ 1.83
CUL4A-208ENST00000474116 ATRNO75882 1429 aa26.46■■□□□ 1.83
CUL4A-208ENST00000474116 HFM1A2PYH4 1435 aa26.44■■□□□ 1.82
CUL4A-208ENST00000474116 NAIPQ13075 1403 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms