RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 HDGFP51858 240 aaKnown RBP38.03■■■■□ 3.68
PKD1-211ENST00000474088 ZFYVE9O95405 1425 aa38.02■■■■□ 3.68
PKD1-211ENST00000474088 ITGAEP38570 1179 aa38.01■■■■□ 3.68
PKD1-211ENST00000474088 PPARGC1BQ86YN6 1023 aaKnown RBP38.01■■■■□ 3.68
PKD1-211ENST00000474088 TMEM131LA2VDJ0 1609 aa37.99■■■■□ 3.67
PKD1-211ENST00000474088 RIMS2Q9UQ26 1411 aa37.98■■■■□ 3.67
PKD1-211ENST00000474088 PLEKHG1Q9ULL1 1385 aa37.97■■■■□ 3.67
PKD1-211ENST00000474088 MYO5BQ9ULV0 1848 aa37.97■■■■□ 3.67
PKD1-211ENST00000474088 RBM33Q96EV2 1170 aaKnown RBP37.97■■■■□ 3.67
PKD1-211ENST00000474088 E9PCH4 1651 aa37.97■■■■□ 3.67
PKD1-211ENST00000474088 PPP1R15AO75807 674 aaPredicted RBP37.96■■■■□ 3.67
PKD1-211ENST00000474088 CHGAP10645 457 aaKnown RBP37.96■■■■□ 3.67
PKD1-211ENST00000474088 FAM135BQ49AJ0 1406 aa37.95■■■■□ 3.67
PKD1-211ENST00000474088 NUP155O75694 1391 aa37.94■■■■□ 3.66
PKD1-211ENST00000474088 IQGAP3Q86VI3 1631 aa37.94■■■■□ 3.66
PKD1-211ENST00000474088 NWD1Q149M9 1564 aa37.93■■■■□ 3.66
PKD1-211ENST00000474088 NKTRP30414 1462 aaKnown RBP37.93■■■■□ 3.66
PKD1-211ENST00000474088 PHF23Q9BUL5 403 aaPredicted RBP37.93■■■■□ 3.66
PKD1-211ENST00000474088 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.91■■■■□ 3.66
PKD1-211ENST00000474088 TBX22Q9Y458 520 aa37.88■■■■□ 3.65
PKD1-211ENST00000474088 NUTM2DQ5VT03 806 aaPredicted RBP37.84■■■■□ 3.65
PKD1-211ENST00000474088 CHD2O14647 1828 aaKnown RBP37.82■■■■□ 3.65
PKD1-211ENST00000474088 MSH6P52701 1360 aa37.82■■■■□ 3.65
PKD1-211ENST00000474088 ADAMTS13Q76LX8 1427 aa37.78■■■■□ 3.64
PKD1-211ENST00000474088 ROBO1Q9Y6N7 1651 aa37.77■■■■□ 3.64
PKD1-211ENST00000474088 SLAIN2Q9P270 581 aa37.75■■■■□ 3.63
PKD1-211ENST00000474088 NCOA3Q9Y6Q9 1424 aa37.7■■■■□ 3.63
PKD1-211ENST00000474088 PIK3R4Q99570 1358 aa37.7■■■■□ 3.63
PKD1-211ENST00000474088 DIP2AQ14689 1571 aa37.69■■■■□ 3.62
PKD1-211ENST00000474088 RRBP1Q9P2E9 1410 aaKnown RBP37.69■■■■□ 3.62
PKD1-211ENST00000474088 RGS17Q9UGC6 210 aaPredicted RBP37.67■■■■□ 3.62
PKD1-211ENST00000474088 C14orf37Q86TY3 774 aa37.64■■■■□ 3.62
PKD1-211ENST00000474088 SPHKAPQ2M3C7 1700 aa37.63■■■■□ 3.61
PKD1-211ENST00000474088 AMOTL2Q9Y2J4 779 aa37.61■■■■□ 3.61
PKD1-211ENST00000474088 TRPM2O94759 1503 aa37.61■■■■□ 3.61
PKD1-211ENST00000474088 C19orf44Q9H6X5 657 aa37.6■■■■□ 3.61
PKD1-211ENST00000474088 ZNF326Q5BKZ1 582 aaKnown RBP37.59■■■■□ 3.61
PKD1-211ENST00000474088 NAIPQ13075 1403 aa37.59■■■■□ 3.61
PKD1-211ENST00000474088 PTPRUQ92729 1446 aa37.57■■■■□ 3.6
PKD1-211ENST00000474088 CADPS2Q86UW7 1296 aa37.56■■■■□ 3.6
PKD1-211ENST00000474088 PHLPP1O60346 1717 aa37.54■■■■□ 3.6
PKD1-211ENST00000474088 ATF3P18847 181 aa37.53■■■■□ 3.6
PKD1-211ENST00000474088 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.52■■■■□ 3.6
PKD1-211ENST00000474088 SETBP1Q9Y6X0 1596 aa37.51■■■■□ 3.6
PKD1-211ENST00000474088 NRXN3Q9Y4C0 1643 aa37.5■■■■□ 3.59
PKD1-211ENST00000474088 JCADQ9P266 1359 aa37.5■■■■□ 3.59
PKD1-211ENST00000474088 CLTCL1P53675 1640 aa37.47■■■■□ 3.59
PKD1-211ENST00000474088 POTEAQ6S8J7 498 aa37.45■■■■□ 3.59
PKD1-211ENST00000474088 TRIM52Q96A61 297 aa37.45■■■■□ 3.59
PKD1-211ENST00000474088 METP08581 1390 aa37.44■■■■□ 3.58
PKD1-211ENST00000474088 COL16A1Q07092 1604 aaPredicted RBP37.43■■■■□ 3.58
PKD1-211ENST00000474088 HFM1A2PYH4 1435 aa37.42■■■■□ 3.58
PKD1-211ENST00000474088 XRN1Q8IZH2 1706 aaKnown RBP37.41■■■■□ 3.58
PKD1-211ENST00000474088 NEXMIFQ5QGS0 1516 aa37.41■■■■□ 3.58
PKD1-211ENST00000474088 DCCP43146 1447 aa37.37■■■■□ 3.57
PKD1-211ENST00000474088 AHDC1Q5TGY3 1603 aaPredicted RBP37.36■■■■□ 3.57
PKD1-211ENST00000474088 KIF1BO60333 1816 aa37.36■■■■□ 3.57
PKD1-211ENST00000474088 BRINP3Q76B58 766 aa37.36■■■■□ 3.57
PKD1-211ENST00000474088 SLC4A1APQ9BWU0 796 aaKnown RBP37.34■■■■□ 3.57
PKD1-211ENST00000474088 SPATA31A6Q5VVP1 1343 aa37.34■■■■□ 3.57
PKD1-211ENST00000474088 VGFO15240 615 aaPredicted RBP37.31■■■■□ 3.56
PKD1-211ENST00000474088 MST1RQ04912 1400 aa37.27■■■■□ 3.56
PKD1-211ENST00000474088 RPGRIP1LQ68CZ1 1315 aa37.26■■■■□ 3.56
PKD1-211ENST00000474088 LRP6O75581 1613 aa37.25■■■■□ 3.55
PKD1-211ENST00000474088 ADGRL3Q9HAR2 1447 aa37.24■■■■□ 3.55
PKD1-211ENST00000474088 ASXL1Q8IXJ9 1541 aa37.22■■■■□ 3.55
PKD1-211ENST00000474088 SHPRHQ149N8 1683 aa37.21■■■■□ 3.55
PKD1-211ENST00000474088 MEX3CQ5U5Q3 659 aaKnown RBP37.21■■■■□ 3.55
PKD1-211ENST00000474088 FOXD1Q16676 465 aa37.17■■■■□ 3.54
PKD1-211ENST00000474088 SETD5Q9C0A6 1442 aa37.15■■■■□ 3.54
PKD1-211ENST00000474088 NALCNQ8IZF0 1738 aa37.15■■■■□ 3.54
PKD1-211ENST00000474088 SETD1AO15047 1707 aaKnown RBP37.14■■■■□ 3.54
PKD1-211ENST00000474088 PTCH1Q13635 1447 aa37.13■■■■□ 3.53
PKD1-211ENST00000474088 ZNF772Q68DY9 489 aaPredicted RBP37.13■■■■□ 3.53
PKD1-211ENST00000474088 NHSL1Q5SYE7 1610 aa37.12■■■■□ 3.53
PKD1-211ENST00000474088 LRRC59Q96AG4 307 aaKnown RBP37.12■■■■□ 3.53
PKD1-211ENST00000474088 ROBO2Q9HCK4 1378 aa37.12■■■■□ 3.53
PKD1-211ENST00000474088 NUTM2BA6NNL0 878 aaPredicted RBP37.11■■■■□ 3.53
PKD1-211ENST00000474088 NUTM2EB1AL46 878 aaPredicted RBP37.11■■■■□ 3.53
PKD1-211ENST00000474088 NUTM2AQ8IVF1 878 aaPredicted RBP37.11■■■■□ 3.53
PKD1-211ENST00000474088 PPLO60437 1756 aa37.1■■■■□ 3.53
PKD1-211ENST00000474088 DDX17Q92841 729 aaKnown RBP37.09■■■■□ 3.53
PKD1-211ENST00000474088 C1orf167Q5SNV9 1468 aa37.07■■■■□ 3.53
PKD1-211ENST00000474088 PRAG1Q86YV5 1406 aa37.07■■■■□ 3.52
PKD1-211ENST00000474088 MPHOSPH9Q99550 1183 aa37.06■■■■□ 3.52
PKD1-211ENST00000474088 CCDC144AA2RUR9 1427 aa37.04■■■■□ 3.52
PKD1-211ENST00000474088 RGL3Q3MIN7 710 aa37.02■■■■□ 3.52
PKD1-211ENST00000474088 ADGRF5Q8IZF2 1346 aa37.01■■■■□ 3.52
PKD1-211ENST00000474088 ORAI2Q96SN7 254 aa36.99■■■■□ 3.51
PKD1-211ENST00000474088 PNPLA6Q8IY17 1366 aa36.98■■■■□ 3.51
PKD1-211ENST00000474088 SPATA31E1Q6ZUB1 1445 aa36.98■■■■□ 3.51
PKD1-211ENST00000474088 ANKRD30BQ9BXX2 1392 aa36.94■■■■□ 3.5
PKD1-211ENST00000474088 AFF2P51816 1311 aa36.94■■■■□ 3.5
PKD1-211ENST00000474088 RXRBP28702 533 aa36.93■■■■□ 3.5
PKD1-211ENST00000474088 LAMC1P11047 1609 aa36.92■■■■□ 3.5
PKD1-211ENST00000474088 SOS2Q07890 1332 aaPredicted RBP36.91■■■■□ 3.5
PKD1-211ENST00000474088 ACIN1Q9UKV3 1341 aaKnown RBP36.89■■■■□ 3.5
PKD1-211ENST00000474088 C8orf37Q96NL8 207 aa36.88■■■■□ 3.49
PKD1-211ENST00000474088 STK26Q9P289 416 aa36.88■■■■□ 3.49
PKD1-211ENST00000474088 IFT172Q9UG01 1749 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms