RNA–Protein interactions for RNA: ENST00000473728.1

GCC1-202, Transcript of GRIP and coiled-coil domain containing 1, humanhuman

TSL 3

Gene GCC1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC1-202ENST00000473728 CHGAP10645 457 aaKnown RBP17.42■□□□□ 0.38
GCC1-202ENST00000473728 ALKQ9UM73 1620 aa17.41■□□□□ 0.38
GCC1-202ENST00000473728 NUTM2DQ5VT03 806 aaPredicted RBP17.4■□□□□ 0.38
GCC1-202ENST00000473728 TRIM52Q96A61 297 aa17.4■□□□□ 0.38
GCC1-202ENST00000473728 SPHKAPQ2M3C7 1700 aa17.4■□□□□ 0.38
GCC1-202ENST00000473728 PLEKHG1Q9ULL1 1385 aa17.38■□□□□ 0.37
GCC1-202ENST00000473728 XIRP1Q702N8 1843 aaKnown RBP17.37■□□□□ 0.37
GCC1-202ENST00000473728 KCNA6P17658 529 aa17.36■□□□□ 0.37
GCC1-202ENST00000473728 CLTCL1P53675 1640 aa17.36■□□□□ 0.37
GCC1-202ENST00000473728 SLC4A1APQ9BWU0 796 aaKnown RBP17.35■□□□□ 0.37
GCC1-202ENST00000473728 HDGFP51858 240 aaKnown RBP17.34■□□□□ 0.37
GCC1-202ENST00000473728 ADAMTS13Q76LX8 1427 aa17.34■□□□□ 0.37
GCC1-202ENST00000473728 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
GCC1-202ENST00000473728 TRPM2O94759 1503 aa17.33■□□□□ 0.37
GCC1-202ENST00000473728 TOM1O60784 492 aa17.33■□□□□ 0.36
GCC1-202ENST00000473728 RBM33Q96EV2 1170 aaKnown RBP17.33■□□□□ 0.36
GCC1-202ENST00000473728 BCANQ96GW7 911 aa17.33■□□□□ 0.36
GCC1-202ENST00000473728 TBX22Q9Y458 520 aa17.33■□□□□ 0.36
GCC1-202ENST00000473728 PPP1R15AO75807 674 aaPredicted RBP17.32■□□□□ 0.36
GCC1-202ENST00000473728 PIP4K2BP78356 416 aa17.32■□□□□ 0.36
GCC1-202ENST00000473728 CHD2O14647 1828 aaKnown RBP17.31■□□□□ 0.36
GCC1-202ENST00000473728 MPHOSPH9Q99550 1183 aa17.3■□□□□ 0.36
GCC1-202ENST00000473728 NWD1Q149M9 1564 aa17.3■□□□□ 0.36
GCC1-202ENST00000473728 TMEM94Q12767 1356 aa17.29■□□□□ 0.36
GCC1-202ENST00000473728 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
GCC1-202ENST00000473728 PROSER2Q86WR7 435 aaPredicted RBP17.28■□□□□ 0.36
GCC1-202ENST00000473728 NRXN3Q9Y4C0 1643 aa17.28■□□□□ 0.36
GCC1-202ENST00000473728 NEXMIFQ5QGS0 1516 aa17.27■□□□□ 0.36
GCC1-202ENST00000473728 HSPA1LP34931 641 aa17.27■□□□□ 0.36
GCC1-202ENST00000473728 ZNF326Q5BKZ1 582 aaKnown RBP17.27■□□□□ 0.36
GCC1-202ENST00000473728 PTPRUQ92729 1446 aa17.27■□□□□ 0.35
GCC1-202ENST00000473728 KIF1BO60333 1816 aa17.26■□□□□ 0.35
GCC1-202ENST00000473728 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
GCC1-202ENST00000473728 RAB3GAP2Q9H2M9 1393 aa17.24■□□□□ 0.35
GCC1-202ENST00000473728 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
GCC1-202ENST00000473728 SETBP1Q9Y6X0 1596 aa17.23■□□□□ 0.35
GCC1-202ENST00000473728 AMOTL2Q9Y2J4 779 aa17.22■□□□□ 0.35
GCC1-202ENST00000473728 METP08581 1390 aa17.22■□□□□ 0.35
GCC1-202ENST00000473728 PIK3R4Q99570 1358 aa17.22■□□□□ 0.35
GCC1-202ENST00000473728 DIP2AQ14689 1571 aa17.22■□□□□ 0.35
GCC1-202ENST00000473728 SPATA31E1Q6ZUB1 1445 aa17.18■□□□□ 0.34
GCC1-202ENST00000473728 RPGRIP1LQ68CZ1 1315 aa17.18■□□□□ 0.34
GCC1-202ENST00000473728 PPLO60437 1756 aa17.17■□□□□ 0.34
GCC1-202ENST00000473728 FAM135BQ49AJ0 1406 aa17.16■□□□□ 0.34
GCC1-202ENST00000473728 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
GCC1-202ENST00000473728 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
GCC1-202ENST00000473728 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
GCC1-202ENST00000473728 NCOA3Q9Y6Q9 1424 aa17.15■□□□□ 0.34
GCC1-202ENST00000473728 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
GCC1-202ENST00000473728 SETD1AO15047 1707 aaKnown RBP17.15■□□□□ 0.34
GCC1-202ENST00000473728 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
GCC1-202ENST00000473728 HRCP23327 699 aa17.14■□□□□ 0.33
GCC1-202ENST00000473728 SLAIN2Q9P270 581 aa17.14■□□□□ 0.33
GCC1-202ENST00000473728 ADGRF5Q8IZF2 1346 aa17.14■□□□□ 0.33
GCC1-202ENST00000473728 MSH6P52701 1360 aa17.14■□□□□ 0.33
GCC1-202ENST00000473728 DISP3Q9P2K9 1392 aa17.13■□□□□ 0.33
GCC1-202ENST00000473728 C19orf44Q9H6X5 657 aa17.12■□□□□ 0.33
GCC1-202ENST00000473728 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.12■□□□□ 0.33
GCC1-202ENST00000473728 IFT172Q9UG01 1749 aa17.11■□□□□ 0.33
GCC1-202ENST00000473728 ROBO1Q9Y6N7 1651 aa17.1■□□□□ 0.33
GCC1-202ENST00000473728 ILDR2Q71H61 639 aa17.1■□□□□ 0.33
GCC1-202ENST00000473728 ANKRD30BQ9BXX2 1392 aa17.1■□□□□ 0.33
GCC1-202ENST00000473728 ROBO2Q9HCK4 1378 aa17.07■□□□□ 0.32
GCC1-202ENST00000473728 C14orf37Q86TY3 774 aa17.07■□□□□ 0.32
GCC1-202ENST00000473728 CADPS2Q86UW7 1296 aa17.05■□□□□ 0.32
GCC1-202ENST00000473728 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
GCC1-202ENST00000473728 ATF3P18847 181 aa17.04■□□□□ 0.32
GCC1-202ENST00000473728 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
GCC1-202ENST00000473728 ASXL1Q8IXJ9 1541 aa17.03■□□□□ 0.32
GCC1-202ENST00000473728 TMEM132EQ6IEE7 984 aa17.03■□□□□ 0.32
GCC1-202ENST00000473728 PIK3C2GO75747 1445 aa17.03■□□□□ 0.32
GCC1-202ENST00000473728 NALCNQ8IZF0 1738 aa17.02■□□□□ 0.32
GCC1-202ENST00000473728 NRXN1Q9ULB1 1477 aa17.01■□□□□ 0.31
GCC1-202ENST00000473728 BRINP3Q76B58 766 aa17.01■□□□□ 0.31
GCC1-202ENST00000473728 DCCP43146 1447 aa17.01■□□□□ 0.31
GCC1-202ENST00000473728 MST1RQ04912 1400 aa17.01■□□□□ 0.31
GCC1-202ENST00000473728 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
GCC1-202ENST00000473728 ADGRL3Q9HAR2 1447 aa17.01■□□□□ 0.31
GCC1-202ENST00000473728 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
GCC1-202ENST00000473728 CFAP70Q5T0N1 1121 aa16.99■□□□□ 0.31
GCC1-202ENST00000473728 PHLPP1O60346 1717 aa16.99■□□□□ 0.31
GCC1-202ENST00000473728 WAPLQ7Z5K2 1190 aa16.98■□□□□ 0.31
GCC1-202ENST00000473728 STK26Q9P289 416 aa16.98■□□□□ 0.31
GCC1-202ENST00000473728 MYOM2P54296 1465 aa16.98■□□□□ 0.31
GCC1-202ENST00000473728 COL16A1Q07092 1604 aaPredicted RBP16.97■□□□□ 0.31
GCC1-202ENST00000473728 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
GCC1-202ENST00000473728 DHX57Q6P158 1386 aaKnown RBP16.97■□□□□ 0.31
GCC1-202ENST00000473728 ABCC11Q96J66 1382 aa16.97■□□□□ 0.31
GCC1-202ENST00000473728 RGS17Q9UGC6 210 aaPredicted RBP16.96■□□□□ 0.31
GCC1-202ENST00000473728 PLEKHH1Q9ULM0 1364 aa16.96■□□□□ 0.31
GCC1-202ENST00000473728 TECPR2O15040 1411 aa16.96■□□□□ 0.3
GCC1-202ENST00000473728 DDX17Q92841 729 aaKnown RBP16.95■□□□□ 0.3
GCC1-202ENST00000473728 AHDC1Q5TGY3 1603 aaPredicted RBP16.95■□□□□ 0.3
GCC1-202ENST00000473728 MSH5O43196 834 aa16.94■□□□□ 0.3
GCC1-202ENST00000473728 YTHDC2Q9H6S0 1430 aaKnown RBP16.94■□□□□ 0.3
GCC1-202ENST00000473728 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
GCC1-202ENST00000473728 DCAF11Q8TEB1 546 aa16.93■□□□□ 0.3
GCC1-202ENST00000473728 ORAI2Q96SN7 254 aa16.93■□□□□ 0.3
GCC1-202ENST00000473728 KDM2AQ9Y2K7 1162 aa16.93■□□□□ 0.3
GCC1-202ENST00000473728 KNDC1Q76NI1 1749 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms