RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 MYO5BQ9ULV0 1848 aa19.07■□□□□ 0.64
C9orf85-204ENST00000473252 SPHKAPQ2M3C7 1700 aa19.06■□□□□ 0.64
C9orf85-204ENST00000473252 MAPK8IP2Q13387 824 aaPredicted RBP19.02■□□□□ 0.64
C9orf85-204ENST00000473252 ABCF1Q8NE71 845 aaKnown RBP eCLIP19■□□□□ 0.63
C9orf85-204ENST00000473252 ZFYVE9O95405 1425 aa19■□□□□ 0.63
C9orf85-204ENST00000473252 TRIM52Q96A61 297 aa18.99■□□□□ 0.63
C9orf85-204ENST00000473252 STRCP1A6NGW2 1772 aa18.98■□□□□ 0.63
C9orf85-204ENST00000473252 TRPM2O94759 1503 aa18.97■□□□□ 0.63
C9orf85-204ENST00000473252 RIMS2Q9UQ26 1411 aa18.97■□□□□ 0.63
C9orf85-204ENST00000473252 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
C9orf85-204ENST00000473252 PLEKHG1Q9ULL1 1385 aa18.96■□□□□ 0.63
C9orf85-204ENST00000473252 KIF1BO60333 1816 aa18.95■□□□□ 0.62
C9orf85-204ENST00000473252 CHGAP10645 457 aaKnown RBP18.95■□□□□ 0.62
C9orf85-204ENST00000473252 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
C9orf85-204ENST00000473252 LRRC7Q96NW7 1537 aa18.92■□□□□ 0.62
C9orf85-204ENST00000473252 PPP1R15AO75807 674 aaPredicted RBP18.92■□□□□ 0.62
C9orf85-204ENST00000473252 CLTCL1P53675 1640 aa18.92■□□□□ 0.62
C9orf85-204ENST00000473252 SETD5Q9C0A6 1442 aa18.91■□□□□ 0.62
C9orf85-204ENST00000473252 UBAP1LF5GYI3 381 aa18.91■□□□□ 0.62
C9orf85-204ENST00000473252 TOM1O60784 492 aa18.91■□□□□ 0.62
C9orf85-204ENST00000473252 KCNA6P17658 529 aa18.91■□□□□ 0.62
C9orf85-204ENST00000473252 DIP2AQ14689 1571 aa18.9■□□□□ 0.62
C9orf85-204ENST00000473252 TBX22Q9Y458 520 aa18.9■□□□□ 0.62
C9orf85-204ENST00000473252 CHD2O14647 1828 aaKnown RBP18.9■□□□□ 0.62
C9orf85-204ENST00000473252 BCANQ96GW7 911 aa18.89■□□□□ 0.61
C9orf85-204ENST00000473252 NWD1Q149M9 1564 aa18.89■□□□□ 0.61
C9orf85-204ENST00000473252 SLC26A8Q96RN1 970 aa18.88■□□□□ 0.61
C9orf85-204ENST00000473252 NKTRP30414 1462 aaKnown RBP18.87■□□□□ 0.61
C9orf85-204ENST00000473252 XIRP1Q702N8 1843 aaKnown RBP18.87■□□□□ 0.61
C9orf85-204ENST00000473252 PIK3R4Q99570 1358 aa18.87■□□□□ 0.61
C9orf85-204ENST00000473252 MPHOSPH9Q99550 1183 aa18.86■□□□□ 0.61
C9orf85-204ENST00000473252 HRCP23327 699 aa18.84■□□□□ 0.61
C9orf85-204ENST00000473252 ZNF326Q5BKZ1 582 aaKnown RBP18.84■□□□□ 0.61
C9orf85-204ENST00000473252 ADAMTS13Q76LX8 1427 aa18.83■□□□□ 0.61
C9orf85-204ENST00000473252 RPGRIP1LQ68CZ1 1315 aa18.83■□□□□ 0.61
C9orf85-204ENST00000473252 SETBP1Q9Y6X0 1596 aa18.83■□□□□ 0.6
C9orf85-204ENST00000473252 NEXMIFQ5QGS0 1516 aa18.83■□□□□ 0.6
C9orf85-204ENST00000473252 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
C9orf85-204ENST00000473252 NUTM2DQ5VT03 806 aaPredicted RBP18.8■□□□□ 0.6
C9orf85-204ENST00000473252 CCDC144AA2RUR9 1427 aa18.8■□□□□ 0.6
C9orf85-204ENST00000473252 NCOA3Q9Y6Q9 1424 aa18.8■□□□□ 0.6
C9orf85-204ENST00000473252 ALKQ9UM73 1620 aa18.79■□□□□ 0.6
C9orf85-204ENST00000473252 NRXN3Q9Y4C0 1643 aa18.79■□□□□ 0.6
C9orf85-204ENST00000473252 VGFO15240 615 aaPredicted RBP18.79■□□□□ 0.6
C9orf85-204ENST00000473252 PROSER2Q86WR7 435 aaPredicted RBP18.79■□□□□ 0.6
C9orf85-204ENST00000473252 TMEM94Q12767 1356 aa18.79■□□□□ 0.6
C9orf85-204ENST00000473252 PPLO60437 1756 aa18.78■□□□□ 0.6
C9orf85-204ENST00000473252 KCNA4P22459 653 aa18.75■□□□□ 0.59
C9orf85-204ENST00000473252 PIP4K2BP78356 416 aa18.74■□□□□ 0.59
C9orf85-204ENST00000473252 MSH6P52701 1360 aa18.72■□□□□ 0.59
C9orf85-204ENST00000473252 SPATA31E1Q6ZUB1 1445 aa18.72■□□□□ 0.59
C9orf85-204ENST00000473252 XRN1Q8IZH2 1706 aaKnown RBP18.71■□□□□ 0.59
C9orf85-204ENST00000473252 IFT172Q9UG01 1749 aa18.71■□□□□ 0.59
C9orf85-204ENST00000473252 AMOTL2Q9Y2J4 779 aa18.71■□□□□ 0.59
C9orf85-204ENST00000473252 ANKRD30BQ9BXX2 1392 aa18.69■□□□□ 0.58
C9orf85-204ENST00000473252 SETD1AO15047 1707 aaKnown RBP18.69■□□□□ 0.58
C9orf85-204ENST00000473252 FAM135BQ49AJ0 1406 aa18.69■□□□□ 0.58
C9orf85-204ENST00000473252 PTPRUQ92729 1446 aa18.69■□□□□ 0.58
C9orf85-204ENST00000473252 METP08581 1390 aa18.68■□□□□ 0.58
C9orf85-204ENST00000473252 HSPA1LP34931 641 aa18.67■□□□□ 0.58
C9orf85-204ENST00000473252 C19orf44Q9H6X5 657 aa18.66■□□□□ 0.58
C9orf85-204ENST00000473252 CNKSR2Q8WXI2 1034 aa18.65■□□□□ 0.58
C9orf85-204ENST00000473252 RBM33Q96EV2 1170 aaKnown RBP18.65■□□□□ 0.58
C9orf85-204ENST00000473252 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.65■□□□□ 0.58
C9orf85-204ENST00000473252 PRAG1Q86YV5 1406 aa18.65■□□□□ 0.58
C9orf85-204ENST00000473252 RGL3Q3MIN7 710 aa18.64■□□□□ 0.57
C9orf85-204ENST00000473252 CADPS2Q86UW7 1296 aa18.64■□□□□ 0.57
C9orf85-204ENST00000473252 DCCP43146 1447 aa18.63■□□□□ 0.57
C9orf85-204ENST00000473252 ROBO1Q9Y6N7 1651 aa18.63■□□□□ 0.57
C9orf85-204ENST00000473252 C14orf37Q86TY3 774 aa18.62■□□□□ 0.57
C9orf85-204ENST00000473252 SLAIN2Q9P270 581 aa18.62■□□□□ 0.57
C9orf85-204ENST00000473252 PTCH1Q13635 1447 aa18.61■□□□□ 0.57
C9orf85-204ENST00000473252 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
C9orf85-204ENST00000473252 ADGRF5Q8IZF2 1346 aa18.6■□□□□ 0.57
C9orf85-204ENST00000473252 ATF3P18847 181 aa18.6■□□□□ 0.57
C9orf85-204ENST00000473252 STAC3Q96MF2 364 aa18.6■□□□□ 0.57
C9orf85-204ENST00000473252 MYOM2P54296 1465 aa18.59■□□□□ 0.57
C9orf85-204ENST00000473252 PIK3C2GO75747 1445 aa18.58■□□□□ 0.57
C9orf85-204ENST00000473252 LAMC1P11047 1609 aa18.58■□□□□ 0.56
C9orf85-204ENST00000473252 NRXN1Q9ULB1 1477 aa18.58■□□□□ 0.56
C9orf85-204ENST00000473252 ADGRL3Q9HAR2 1447 aa18.56■□□□□ 0.56
C9orf85-204ENST00000473252 KNDC1Q76NI1 1749 aa18.55■□□□□ 0.56
C9orf85-204ENST00000473252 DISP3Q9P2K9 1392 aa18.55■□□□□ 0.56
C9orf85-204ENST00000473252 NALCNQ8IZF0 1738 aa18.54■□□□□ 0.56
C9orf85-204ENST00000473252 TECPR2O15040 1411 aa18.53■□□□□ 0.56
C9orf85-204ENST00000473252 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
C9orf85-204ENST00000473252 PHLPP1O60346 1717 aa18.52■□□□□ 0.56
C9orf85-204ENST00000473252 LRPPRCP42704 1394 aaKnown RBP18.52■□□□□ 0.55
C9orf85-204ENST00000473252 ABCC11Q96J66 1382 aa18.52■□□□□ 0.55
C9orf85-204ENST00000473252 ROBO2Q9HCK4 1378 aa18.52■□□□□ 0.55
C9orf85-204ENST00000473252 SIRT1Q96EB6 747 aa18.51■□□□□ 0.55
C9orf85-204ENST00000473252 AHDC1Q5TGY3 1603 aaPredicted RBP18.5■□□□□ 0.55
C9orf85-204ENST00000473252 MED1Q15648 1581 aaPredicted RBP18.5■□□□□ 0.55
C9orf85-204ENST00000473252 MST1RQ04912 1400 aa18.49■□□□□ 0.55
C9orf85-204ENST00000473252 ASXL1Q8IXJ9 1541 aa18.49■□□□□ 0.55
C9orf85-204ENST00000473252 DHX57Q6P158 1386 aaKnown RBP18.48■□□□□ 0.55
C9orf85-204ENST00000473252 YTHDC2Q9H6S0 1430 aaKnown RBP18.48■□□□□ 0.55
C9orf85-204ENST00000473252 COL16A1Q07092 1604 aaPredicted RBP18.46■□□□□ 0.55
C9orf85-204ENST00000473252 BRINP3Q76B58 766 aa18.46■□□□□ 0.55
C9orf85-204ENST00000473252 DCAF11Q8TEB1 546 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms